FFCP PHASE1:Hg19::chr10:105879979..105879997,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:105879979..105879997,-|id=chr10:105879979..105879997,-|ontology_enrichment_celltype=CL:0002057!4.32e-64!42;CL:0000860!1.89e-59!45;CL:0002009!8.31e-46!65;CL:0002194!1.02e-43!63;CL:0000576!1.02e-43!63;CL:0000040!1.02e-43!63;CL:0000559!1.02e-43!63;CL:0000766!9.55e-42!76;CL:0000557!1.69e-41!71;CL:0000839!7.64e-39!70;CL:0000763!1.01e-28!112;CL:0000049!1.01e-28!112;CL:0000738!1.31e-27!140;CL:0002087!9.65e-27!119;CL:0002031!2.50e-23!124;CL:0000037!2.92e-21!172;CL:0000566!2.92e-21!172;CL:0000988!9.85e-20!182;CL:0002032!4.19e-19!165;CL:0000837!4.19e-19!165;CL:0000842!1.49e-07!3;CL:0000134!1.71e-07!358;CL:0000767!1.75e-07!3;CL:0002320!3.20e-07!365|ontology_enrichment_celltype_v019=CL:0000860;7.43e-56;33!CL:0002057;7.43e-56;33!CL:0000473;1.23e-38;39!CL:0000234;1.23e-38;39!CL:0000576;8.22e-33;48!CL:0000766;8.46e-24;69!CL:0002087;4.93e-17;104!CL:0002393;2.97e-16;6!CL:0002397;2.97e-16;6!CL:0000763;2.90e-12;100!CL:0000738;6.57e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,7.86e-70,42;CL:0002057,7.86e-70,42;CL:0000473,7.55e-61,48;CL:0000234,7.55e-61,48;CL:0002194,2.91e-48,59;CL:0000576,2.91e-48,59;CL:0000040,2.91e-48,59;CL:0000559,2.91e-48,59;CL:0002009,1.22e-46,61;CL:0000839,5.33e-43,66;CL:0000557,2.46e-42,67;CL:0000766,2.73e-39,72;CL:0002087,5.63e-27,115;CL:0000763,1.39e-25,108;CL:0000049,1.39e-25,108;CL:0002031,8.03e-23,120;CL:0000738,1.74e-22,136;CL:0000037,8.83e-18,168;CL:0000988,9.26e-17,177;CL:0002032,1.86e-16,161;CL:0000837,1.86e-16,161;CL:0002393,4.53e-11,9;CL:0002397,4.53e-11,9;CL:0000134,4.00e-07,354;CL:0002320,6.20e-07,361|ontology_enrichment_development_v019=CL:0002057;6.05e-48;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.12e-36!80;UBERON:0001474!2.51e-33!86;UBERON:0002390!3.81e-32!102;UBERON:0003061!3.81e-32!102;UBERON:0004765!6.10e-30!101;UBERON:0001434!6.10e-30!101;UBERON:0002193!9.50e-29!112;UBERON:0002405!1.61e-23!115;UBERON:0002204!8.45e-16!167;UBERON:0003081!5.42e-12!216;UBERON:0002384!7.52e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.89e-37,76;UBERON:0001474,2.70e-34,82;UBERON:0002390,5.36e-32,98;UBERON:0003061,5.36e-32,98;UBERON:0004765,4.36e-31,90;UBERON:0002405,5.04e-30,93;UBERON:0002193,7.44e-29,108;UBERON:0001434,8.67e-28,100;UBERON:0002204,8.77e-16,167;UBERON:0003081,2.59e-14,203;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.928896739896456,0,0,0,0,0,0,9.41792194504192,2.80762226458198,1.30206522429511,0,0,0,0,0,0,0,0,0.309706370895104,0.863077176966451,1.0246428261164,2.12834006899727,5.86067657252252,6.45484683583826,8.12558919566051,0.188242339542605,0,0.674170453335254,13.7737751566906,16.3673803808808,8.31138263538754,0,0,0,8.70627715885752,6.80862269629368,4.9825779919646,0.251248665256743,0.521482918420201,0.217188844705117,2.42159801053347,8.83866326370155,14.2408074348398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,1.17400313583789,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:105879979..105879997,- | |||
|id=chr10:105879979..105879997,- | |||
|ontology_enrichment_celltype=CL:0002057!4.32e-64!42;CL:0000860!1.89e-59!45;CL:0002009!8.31e-46!65;CL:0002194!1.02e-43!63;CL:0000576!1.02e-43!63;CL:0000040!1.02e-43!63;CL:0000559!1.02e-43!63;CL:0000766!9.55e-42!76;CL:0000557!1.69e-41!71;CL:0000839!7.64e-39!70;CL:0000763!1.01e-28!112;CL:0000049!1.01e-28!112;CL:0000738!1.31e-27!140;CL:0002087!9.65e-27!119;CL:0002031!2.50e-23!124;CL:0000037!2.92e-21!172;CL:0000566!2.92e-21!172;CL:0000988!9.85e-20!182;CL:0002032!4.19e-19!165;CL:0000837!4.19e-19!165;CL:0000842!1.49e-07!3;CL:0000134!1.71e-07!358;CL:0000767!1.75e-07!3;CL:0002320!3.20e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.43e-56;33!CL:0002057;7.43e-56;33!CL:0000473;1.23e-38;39!CL:0000234;1.23e-38;39!CL:0000576;8.22e-33;48!CL:0000766;8.46e-24;69!CL:0002087;4.93e-17;104!CL:0002393;2.97e-16;6!CL:0002397;2.97e-16;6!CL:0000763;2.90e-12;100!CL:0000738;6.57e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.86e-70,42;CL:0002057,7.86e-70,42;CL:0000473,7.55e-61,48;CL:0000234,7.55e-61,48;CL:0002194,2.91e-48,59;CL:0000576,2.91e-48,59;CL:0000040,2.91e-48,59;CL:0000559,2.91e-48,59;CL:0002009,1.22e-46,61;CL:0000839,5.33e-43,66;CL:0000557,2.46e-42,67;CL:0000766,2.73e-39,72;CL:0002087,5.63e-27,115;CL:0000763,1.39e-25,108;CL:0000049,1.39e-25,108;CL:0002031,8.03e-23,120;CL:0000738,1.74e-22,136;CL:0000037,8.83e-18,168;CL:0000988,9.26e-17,177;CL:0002032,1.86e-16,161;CL:0000837,1.86e-16,161;CL:0002393,4.53e-11,9;CL:0002397,4.53e-11,9;CL:0000134,4.00e-07,354;CL:0002320,6.20e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.05e-48;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.12e-36!80;UBERON:0001474!2.51e-33!86;UBERON:0002390!3.81e-32!102;UBERON:0003061!3.81e-32!102;UBERON:0004765!6.10e-30!101;UBERON:0001434!6.10e-30!101;UBERON:0002193!9.50e-29!112;UBERON:0002405!1.61e-23!115;UBERON:0002204!8.45e-16!167;UBERON:0003081!5.42e-12!216;UBERON:0002384!7.52e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.89e-37,76;UBERON:0001474,2.70e-34,82;UBERON:0002390,5.36e-32,98;UBERON:0003061,5.36e-32,98;UBERON:0004765,4.36e-31,90;UBERON:0002405,5.04e-30,93;UBERON:0002193,7.44e-29,108;UBERON:0001434,8.67e-28,100;UBERON:0002204,8.77e-16,167;UBERON:0003081,2.59e-14,203;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.928896739896456,0,0,0,0,0,0,9.41792194504192,2.80762226458198,1.30206522429511,0,0,0,0,0,0,0,0,0.309706370895104,0.863077176966451,1.0246428261164,2.12834006899727,5.86067657252252,6.45484683583826,8.12558919566051,0.188242339542605,0,0.674170453335254,13.7737751566906,16.3673803808808,8.31138263538754,0,0,0,8.70627715885752,6.80862269629368,4.9825779919646,0.251248665256743,0.521482918420201,0.217188844705117,2.42159801053347,8.83866326370155,14.2408074348398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,1.17400313583789,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:105879979..105879997,- | |||
}} |
Revision as of 11:34, 10 September 2013
Short description: | p@chr10:105879979..105879997, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:105879979..105879997, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.86e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.86e-70 | 42 |
defensive cell | 7.55e-61 | 48 |
phagocyte | 7.55e-61 | 48 |
monopoietic cell | 2.91e-48 | 59 |
monocyte | 2.91e-48 | 59 |
monoblast | 2.91e-48 | 59 |
promonocyte | 2.91e-48 | 59 |
macrophage dendritic cell progenitor | 1.22e-46 | 61 |
myeloid lineage restricted progenitor cell | 5.33e-43 | 66 |
granulocyte monocyte progenitor cell | 2.46e-42 | 67 |
myeloid leukocyte | 2.73e-39 | 72 |
nongranular leukocyte | 5.63e-27 | 115 |
myeloid cell | 1.39e-25 | 108 |
common myeloid progenitor | 1.39e-25 | 108 |
hematopoietic lineage restricted progenitor cell | 8.03e-23 | 120 |
leukocyte | 1.74e-22 | 136 |
hematopoietic stem cell | 8.83e-18 | 168 |
hematopoietic cell | 9.26e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.86e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-16 | 161 |
intermediate monocyte | 4.53e-11 | 9 |
CD14-positive, CD16-positive monocyte | 4.53e-11 | 9 |
mesenchymal cell | 4.00e-07 | 354 |
connective tissue cell | 6.20e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.89e-37 | 76 |
bone element | 2.70e-34 | 82 |
hematopoietic system | 5.36e-32 | 98 |
blood island | 5.36e-32 | 98 |
skeletal element | 4.36e-31 | 90 |
immune system | 5.04e-30 | 93 |
hemolymphoid system | 7.44e-29 | 108 |
skeletal system | 8.67e-28 | 100 |
musculoskeletal system | 8.77e-16 | 167 |
lateral plate mesoderm | 2.59e-14 | 203 |
mesoderm | 2.47e-08 | 315 |
mesoderm-derived structure | 2.47e-08 | 315 |
presumptive mesoderm | 2.47e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.