FFCP PHASE1:Hg19::chr12:15699539..15699569,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5800|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9678|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000535311_5end|coexpression_cluster_id=C54|description=CAGE_peak_2_at_PTPRO_5end|id=chr12:15699539..15699569,+|ontology_enrichment_celltype=CL:0000738!6.96e-36!140;CL:0002087!2.96e-35!119;CL:0002031!7.44e-31!124;CL:0000037!4.59e-30!172;CL:0000566!4.59e-30!172;CL:0002032!3.73e-27!165;CL:0000837!3.73e-27!165;CL:0000988!1.81e-26!182;CL:0002009!1.67e-25!65;CL:0002194!6.06e-24!63;CL:0000576!6.06e-24!63;CL:0000040!6.06e-24!63;CL:0000559!6.06e-24!63;CL:0000557!9.53e-22!71;CL:0000839!9.36e-20!70;CL:0000766!9.73e-19!76;CL:0000763!2.43e-16!112;CL:0000049!2.43e-16!112;CL:0002057!1.78e-14!42;CL:0000860!9.05e-13!45;CL:0000451!3.55e-12!10;CL:0000542!2.17e-10!53;CL:0000051!2.17e-10!53;CL:0000990!3.36e-10!8;CL:0000945!5.99e-10!24;CL:0000826!5.99e-10!24;CL:0000838!7.18e-10!52;CL:0000236!8.93e-10!14;CL:0000840!3.67e-07!5;CL:0001029!3.67e-07!5|ontology_enrichment_celltype_v019=CL:0000451;3.51e-22;10!CL:0000990;2.48e-18;8!CL:0000236;5.52e-18;13!CL:0000235;1.36e-13;6!CL:0000840;2.03e-12;5!CL:0000453;8.62e-11;5!CL:0000945;4.16e-10;24!CL:0000738;8.22e-10;136!CL:0000576;2.65e-08;48!CL:0002619;1.58e-07;3!CL:0000542;2.43e-07;53!CL:0002087;6.07e-07;104!CL:0000784;7.39e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,6.40e-35,136;CL:0002087,2.45e-30,115;CL:0002031,4.71e-30,120;CL:0000037,2.69e-26,168;CL:0002032,1.69e-25,161;CL:0000837,1.69e-25,161;CL:0002009,2.41e-25,61;CL:0000988,4.15e-24,177;CL:0002194,7.13e-23,59;CL:0000576,7.13e-23,59;CL:0000040,7.13e-23,59;CL:0000559,7.13e-23,59;CL:0000557,3.13e-22,67;CL:0000451,3.32e-22,10;CL:0000839,1.61e-19,66;CL:0000766,1.81e-18,72;CL:0000990,2.34e-18,8;CL:0000236,1.07e-16,14;CL:0000763,1.69e-15,108;CL:0000049,1.69e-15,108;CL:0000235,1.53e-13,6;CL:0000840,1.85e-12,5;CL:0001029,1.85e-12,5;CL:0000473,8.67e-12,48;CL:0000234,8.67e-12,48;CL:0000453,8.05e-11,5;CL:0000945,3.47e-10,24;CL:0000826,3.47e-10,24;CL:0000542,1.01e-09,53;CL:0000051,1.01e-09,53;CL:0002393,2.58e-09,9;CL:0002397,2.58e-09,9;CL:0000838,5.80e-09,52;CL:0002619,1.51e-07,3;CL:0000784,7.44e-07,3|ontology_enrichment_development_v019=CL:0000051;2.43e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.02e-24!102;UBERON:0003061!1.02e-24!102;UBERON:0007023!3.61e-22!115;UBERON:0002193!4.24e-21!112;UBERON:0002371!5.70e-20!80;UBERON:0001474!2.89e-17!86;UBERON:0002405!5.94e-14!115;UBERON:0001049!1.16e-13!57;UBERON:0005068!1.16e-13!57;UBERON:0006241!1.16e-13!57;UBERON:0007135!1.16e-13!57;UBERON:0004765!3.47e-13!101;UBERON:0001434!3.47e-13!101;UBERON:0003080!1.12e-11!42;UBERON:0002780!4.46e-11!41;UBERON:0001890!4.46e-11!41;UBERON:0006240!4.46e-11!41;UBERON:0002020!8.37e-11!34;UBERON:0003528!8.37e-11!34;UBERON:0001893!9.29e-11!34;UBERON:0002791!2.37e-10!33;UBERON:0002616!2.72e-10!59;UBERON:0001869!1.10e-09!32;UBERON:0001017!5.75e-08!82;UBERON:0002420!7.81e-08!9;UBERON:0007245!7.81e-08!9;UBERON:0010009!7.81e-08!9;UBERON:0010011!7.81e-08!9;UBERON:0000454!7.81e-08!9;UBERON:0000955!1.25e-07!69;UBERON:0006238!1.25e-07!69;UBERON:0002308!1.70e-07!9;UBERON:0000125!1.70e-07!9;UBERON:0002619!2.83e-07!22;UBERON:0003075!3.73e-07!86;UBERON:0007284!3.73e-07!86;UBERON:0005743!4.45e-07!86|ontology_enrichment_uberon_v019=UBERON:0002420;5.42e-09;9!UBERON:0007245;5.42e-09;9!UBERON:0010009;5.42e-09;9!UBERON:0010011;5.42e-09;9!UBERON:0000454;5.42e-09;9!UBERON:0009663;6.82e-09;7!UBERON:0000125;9.46e-07;9!UBERON:0002308;9.46e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-20,98;UBERON:0003061,2.75e-20,98;UBERON:0002371,6.67e-20,76;UBERON:0001474,9.47e-18,82;UBERON:0002193,2.22e-17,108;UBERON:0002405,8.29e-17,93;UBERON:0004765,2.43e-15,90;UBERON:0001434,6.80e-13,100;UBERON:0002420,6.18e-09,9;UBERON:0007245,6.18e-09,9;UBERON:0010009,6.18e-09,9;UBERON:0010011,6.18e-09,9;UBERON:0000454,6.18e-09,9;UBERON:0009663,6.38e-09,7;UBERON:0000125,8.99e-07,9;UBERON:0002308,8.99e-07,9|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.246301768349837,0.157421562627358,0.393364276848904,0,1.39334510984468,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,1.10799081706375,0.601633342410425,0,8.06095707263728,3.56283032620878,11.07574940827,1.89017710413434,1.51150377475524,0.970336244751265,0.464858073811369,0.822335776043652,0.309706370895104,0.28769239232215,0,0.945928919554341,0.344745680736619,0,0,0.752969358170419,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,1.31940520074686,0.398927315243264,0.852449501065388,0,0,0,1.00499466102697,1.0429658368404,0.65156653411535,1.21079900526674,0,0.316462387440884,2.5350634357433,3.18906449947565,1.04829322754188,1.23561494261145,1.20141514273205,0.803627933485401,1.99508920618874,1.591333417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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9678 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000535311_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_2_at_PTPRO_5end | |||
|id=chr12:15699539..15699569,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.96e-36!140;CL:0002087!2.96e-35!119;CL:0002031!7.44e-31!124;CL:0000037!4.59e-30!172;CL:0000566!4.59e-30!172;CL:0002032!3.73e-27!165;CL:0000837!3.73e-27!165;CL:0000988!1.81e-26!182;CL:0002009!1.67e-25!65;CL:0002194!6.06e-24!63;CL:0000576!6.06e-24!63;CL:0000040!6.06e-24!63;CL:0000559!6.06e-24!63;CL:0000557!9.53e-22!71;CL:0000839!9.36e-20!70;CL:0000766!9.73e-19!76;CL:0000763!2.43e-16!112;CL:0000049!2.43e-16!112;CL:0002057!1.78e-14!42;CL:0000860!9.05e-13!45;CL:0000451!3.55e-12!10;CL:0000542!2.17e-10!53;CL:0000051!2.17e-10!53;CL:0000990!3.36e-10!8;CL:0000945!5.99e-10!24;CL:0000826!5.99e-10!24;CL:0000838!7.18e-10!52;CL:0000236!8.93e-10!14;CL:0000840!3.67e-07!5;CL:0001029!3.67e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000451;3.51e-22;10!CL:0000990;2.48e-18;8!CL:0000236;5.52e-18;13!CL:0000235;1.36e-13;6!CL:0000840;2.03e-12;5!CL:0000453;8.62e-11;5!CL:0000945;4.16e-10;24!CL:0000738;8.22e-10;136!CL:0000576;2.65e-08;48!CL:0002619;1.58e-07;3!CL:0000542;2.43e-07;53!CL:0002087;6.07e-07;104!CL:0000784;7.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.40e-35,136;CL:0002087,2.45e-30,115;CL:0002031,4.71e-30,120;CL:0000037,2.69e-26,168;CL:0002032,1.69e-25,161;CL:0000837,1.69e-25,161;CL:0002009,2.41e-25,61;CL:0000988,4.15e-24,177;CL:0002194,7.13e-23,59;CL:0000576,7.13e-23,59;CL:0000040,7.13e-23,59;CL:0000559,7.13e-23,59;CL:0000557,3.13e-22,67;CL:0000451,3.32e-22,10;CL:0000839,1.61e-19,66;CL:0000766,1.81e-18,72;CL:0000990,2.34e-18,8;CL:0000236,1.07e-16,14;CL:0000763,1.69e-15,108;CL:0000049,1.69e-15,108;CL:0000235,1.53e-13,6;CL:0000840,1.85e-12,5;CL:0001029,1.85e-12,5;CL:0000473,8.67e-12,48;CL:0000234,8.67e-12,48;CL:0000453,8.05e-11,5;CL:0000945,3.47e-10,24;CL:0000826,3.47e-10,24;CL:0000542,1.01e-09,53;CL:0000051,1.01e-09,53;CL:0002393,2.58e-09,9;CL:0002397,2.58e-09,9;CL:0000838,5.80e-09,52;CL:0002619,1.51e-07,3;CL:0000784,7.44e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.43e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-24!102;UBERON:0003061!1.02e-24!102;UBERON:0007023!3.61e-22!115;UBERON:0002193!4.24e-21!112;UBERON:0002371!5.70e-20!80;UBERON:0001474!2.89e-17!86;UBERON:0002405!5.94e-14!115;UBERON:0001049!1.16e-13!57;UBERON:0005068!1.16e-13!57;UBERON:0006241!1.16e-13!57;UBERON:0007135!1.16e-13!57;UBERON:0004765!3.47e-13!101;UBERON:0001434!3.47e-13!101;UBERON:0003080!1.12e-11!42;UBERON:0002780!4.46e-11!41;UBERON:0001890!4.46e-11!41;UBERON:0006240!4.46e-11!41;UBERON:0002020!8.37e-11!34;UBERON:0003528!8.37e-11!34;UBERON:0001893!9.29e-11!34;UBERON:0002791!2.37e-10!33;UBERON:0002616!2.72e-10!59;UBERON:0001869!1.10e-09!32;UBERON:0001017!5.75e-08!82;UBERON:0002420!7.81e-08!9;UBERON:0007245!7.81e-08!9;UBERON:0010009!7.81e-08!9;UBERON:0010011!7.81e-08!9;UBERON:0000454!7.81e-08!9;UBERON:0000955!1.25e-07!69;UBERON:0006238!1.25e-07!69;UBERON:0002308!1.70e-07!9;UBERON:0000125!1.70e-07!9;UBERON:0002619!2.83e-07!22;UBERON:0003075!3.73e-07!86;UBERON:0007284!3.73e-07!86;UBERON:0005743!4.45e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;5.42e-09;9!UBERON:0007245;5.42e-09;9!UBERON:0010009;5.42e-09;9!UBERON:0010011;5.42e-09;9!UBERON:0000454;5.42e-09;9!UBERON:0009663;6.82e-09;7!UBERON:0000125;9.46e-07;9!UBERON:0002308;9.46e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-20,98;UBERON:0003061,2.75e-20,98;UBERON:0002371,6.67e-20,76;UBERON:0001474,9.47e-18,82;UBERON:0002193,2.22e-17,108;UBERON:0002405,8.29e-17,93;UBERON:0004765,2.43e-15,90;UBERON:0001434,6.80e-13,100;UBERON:0002420,6.18e-09,9;UBERON:0007245,6.18e-09,9;UBERON:0010009,6.18e-09,9;UBERON:0010011,6.18e-09,9;UBERON:0000454,6.18e-09,9;UBERON:0009663,6.38e-09,7;UBERON:0000125,8.99e-07,9;UBERON:0002308,8.99e-07,9 | |||
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| |||
|short_description=p2@PTPRO | |||
}} |
Revision as of 21:58, 10 September 2013
Short description: | p2@PTPRO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PTPRO_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_ENST00000535311_5end |
EntrezGene: | PTPRO |
HGNC: | 9678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.75e-20 | 98 |
blood island | 2.75e-20 | 98 |
bone marrow | 6.67e-20 | 76 |
bone element | 9.47e-18 | 82 |
hemolymphoid system | 2.22e-17 | 108 |
immune system | 8.29e-17 | 93 |
skeletal element | 2.43e-15 | 90 |
skeletal system | 6.80e-13 | 100 |
basal ganglion | 6.18e-09 | 9 |
nuclear complex of neuraxis | 6.18e-09 | 9 |
aggregate regional part of brain | 6.18e-09 | 9 |
collection of basal ganglia | 6.18e-09 | 9 |
cerebral subcortex | 6.18e-09 | 9 |
telencephalic nucleus | 6.38e-09 | 7 |
neural nucleus | 8.99e-07 | 9 |
nucleus of brain | 8.99e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.