FFCP PHASE1:Hg19::chr12:8666126..8666182,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=338339|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14554|TSSclassifier=S|UniProt=Q8WXI8|association_with_transcript=0bp_to_ENST00000299665,NM_080387,uc001qun.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_CLEC4D_5end|id=chr12:8666126..8666182,+|ontology_enrichment_celltype=CL:0002057!1.04e-52!42;CL:0000860!4.15e-48!45;CL:0000766!2.29e-47!76;CL:0002194!1.85e-41!63;CL:0000576!1.85e-41!63;CL:0000040!1.85e-41!63;CL:0000559!1.85e-41!63;CL:0002009!2.47e-41!65;CL:0000763!4.50e-40!112;CL:0000049!4.50e-40!112;CL:0000839!6.73e-39!70;CL:0000738!3.60e-38!140;CL:0000037!2.70e-37!172;CL:0000566!2.70e-37!172;CL:0000557!2.25e-36!71;CL:0002032!7.99e-35!165;CL:0000837!7.99e-35!165;CL:0000988!9.96e-34!182;CL:0002087!3.12e-33!119;CL:0002031!2.21e-30!124;CL:0000094!1.45e-12!8;CL:0002393!5.74e-09!9;CL:0002397!5.74e-09!9;CL:0000081!1.59e-08!11|ontology_enrichment_celltype_v019=CL:0000860;2.97e-69;33!CL:0002057;2.97e-69;33!CL:0000473;1.37e-57;39!CL:0000234;1.37e-57;39!CL:0000576;3.52e-44;48!CL:0000766;1.47e-33;69!CL:0000094;2.59e-20;8!CL:0000763;1.80e-19;100!CL:0000081;2.65e-14;11!CL:0002393;5.49e-14;6!CL:0002397;5.49e-14;6!CL:0002087;2.02e-13;104!CL:0000738;8.31e-11;136!CL:0000775;3.97e-09;3!CL:0000988;4.97e-09;177!CL:0000767;4.83e-08;3!CL:0000226;7.68e-08;3!CL:0000842;7.68e-08;3|ontology_enrichment_celltype_v019_2=CL:0000860,4.00e-82,42;CL:0002057,4.00e-82,42;CL:0000473,2.48e-81,48;CL:0000234,2.48e-81,48;CL:0000766,5.04e-77,72;CL:0002194,1.46e-65,59;CL:0000576,1.46e-65,59;CL:0000040,1.46e-65,59;CL:0000559,1.46e-65,59;CL:0002009,4.99e-63,61;CL:0000763,1.06e-59,108;CL:0000049,1.06e-59,108;CL:0000839,2.33e-57,66;CL:0000557,2.52e-56,67;CL:0000738,7.37e-50,136;CL:0000037,5.67e-47,168;CL:0000988,1.01e-43,177;CL:0002032,1.20e-42,161;CL:0000837,1.20e-42,161;CL:0002087,2.47e-41,115;CL:0002031,1.24e-33,120;CL:0000094,2.62e-20,8;CL:0000081,2.67e-14,11;CL:0000134,1.65e-13,354;CL:0002320,6.22e-13,361;CL:0000219,6.44e-11,386;CL:0000775,3.97e-09,3;CL:0002393,4.75e-09,9;CL:0002397,4.75e-09,9;CL:0000048,1.72e-08,427;CL:0000034,3.06e-08,441;CL:0000723,3.69e-08,433;CL:0000767,4.89e-08,3;CL:0000226,7.33e-08,3;CL:0000842,7.33e-08,3|ontology_enrichment_development_v019=CL:0002057;4.97e-59;42!CL:0000049;6.34e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.14e-42!102;UBERON:0003061!1.14e-42!102;UBERON:0002193!1.24e-39!112;UBERON:0002371!2.34e-30!80;UBERON:0001474!4.61e-27!86;UBERON:0007023!1.12e-25!115;UBERON:0002405!6.00e-24!115;UBERON:0004765!1.31e-20!101;UBERON:0001434!1.31e-20!101;UBERON:0003081!6.23e-14!216;UBERON:0000178!9.27e-12!15;UBERON:0000179!9.27e-12!15;UBERON:0000463!9.27e-12!15;UBERON:0002204!3.04e-08!167|ontology_enrichment_uberon_v019=UBERON:0000178;7.73e-20;15!UBERON:0000179;7.73e-20;15!UBERON:0000463;7.73e-20;15!UBERON:0002390;7.27e-12;32!UBERON:0002193;5.30e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-68,98;UBERON:0003061,1.34e-68,98;UBERON:0002193,3.43e-63,108;UBERON:0002371,3.08e-48,76;UBERON:0002405,3.03e-45,93;UBERON:0001474,7.94e-44,82;UBERON:0004765,7.40e-39,90;UBERON:0001434,9.21e-34,100;UBERON:0003081,3.67e-25,203;UBERON:0000178,7.81e-20,15;UBERON:0000179,7.81e-20,15;UBERON:0000463,7.81e-20,15;UBERON:0002204,1.73e-15,167;UBERON:0000926,2.73e-12,315;UBERON:0004120,2.73e-12,315;UBERON:0006603,2.73e-12,315;UBERON:0002384,3.77e-12,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4075640286182,21.4944462934439,10.9919447554414,0,0,0,0,0,0,23.2678071583389,30.8838449104018,13.237663113667,0.447830948479849,0.971680998056939,0,20.9373463842573,9.44689859222024,5.33684934613196,20.9186133215116,11.9238687526329,9.60089749774821,34.5230870786581,14.8573209786878,29.7967609659617,88.599639949311,32.9197188627751,28.4395621848118,20.7066573496865,8.73299680185107,17.3037083022715,73.4601341690166,40.4370574115878,41.5569131769377,19.791078011203,14.1619196911359,10.6556187633174,57.171220009831,10.7803192691317,19.3074897188628,31.4060831570929,15.1230046341858,24.1079617622679,54.4859552370032,31.303599058943,44.3047342417238,3.38008458099107,7.22854619881148,7.12839394728478,43.2465229914006,72.084908563923,39.5384943274817,0,0.59675003159727,0.182664153764634,0,0.546138611262131,0,1.70692089026603,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,3.36305137788922,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50575119077773,0.255973222308837,1.24930726552346,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.90792499444274,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.1231461026221,124.089684527464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=338339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14554 | |||
|TSSclassifier=S | |||
|UniProt=Q8WXI8 | |||
|association_with_transcript=0bp_to_ENST00000299665,NM_080387,uc001qun.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_CLEC4D_5end | |||
|id=chr12:8666126..8666182,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.04e-52!42;CL:0000860!4.15e-48!45;CL:0000766!2.29e-47!76;CL:0002194!1.85e-41!63;CL:0000576!1.85e-41!63;CL:0000040!1.85e-41!63;CL:0000559!1.85e-41!63;CL:0002009!2.47e-41!65;CL:0000763!4.50e-40!112;CL:0000049!4.50e-40!112;CL:0000839!6.73e-39!70;CL:0000738!3.60e-38!140;CL:0000037!2.70e-37!172;CL:0000566!2.70e-37!172;CL:0000557!2.25e-36!71;CL:0002032!7.99e-35!165;CL:0000837!7.99e-35!165;CL:0000988!9.96e-34!182;CL:0002087!3.12e-33!119;CL:0002031!2.21e-30!124;CL:0000094!1.45e-12!8;CL:0002393!5.74e-09!9;CL:0002397!5.74e-09!9;CL:0000081!1.59e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.97e-69;33!CL:0002057;2.97e-69;33!CL:0000473;1.37e-57;39!CL:0000234;1.37e-57;39!CL:0000576;3.52e-44;48!CL:0000766;1.47e-33;69!CL:0000094;2.59e-20;8!CL:0000763;1.80e-19;100!CL:0000081;2.65e-14;11!CL:0002393;5.49e-14;6!CL:0002397;5.49e-14;6!CL:0002087;2.02e-13;104!CL:0000738;8.31e-11;136!CL:0000775;3.97e-09;3!CL:0000988;4.97e-09;177!CL:0000767;4.83e-08;3!CL:0000226;7.68e-08;3!CL:0000842;7.68e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.00e-82,42;CL:0002057,4.00e-82,42;CL:0000473,2.48e-81,48;CL:0000234,2.48e-81,48;CL:0000766,5.04e-77,72;CL:0002194,1.46e-65,59;CL:0000576,1.46e-65,59;CL:0000040,1.46e-65,59;CL:0000559,1.46e-65,59;CL:0002009,4.99e-63,61;CL:0000763,1.06e-59,108;CL:0000049,1.06e-59,108;CL:0000839,2.33e-57,66;CL:0000557,2.52e-56,67;CL:0000738,7.37e-50,136;CL:0000037,5.67e-47,168;CL:0000988,1.01e-43,177;CL:0002032,1.20e-42,161;CL:0000837,1.20e-42,161;CL:0002087,2.47e-41,115;CL:0002031,1.24e-33,120;CL:0000094,2.62e-20,8;CL:0000081,2.67e-14,11;CL:0000134,1.65e-13,354;CL:0002320,6.22e-13,361;CL:0000219,6.44e-11,386;CL:0000775,3.97e-09,3;CL:0002393,4.75e-09,9;CL:0002397,4.75e-09,9;CL:0000048,1.72e-08,427;CL:0000034,3.06e-08,441;CL:0000723,3.69e-08,433;CL:0000767,4.89e-08,3;CL:0000226,7.33e-08,3;CL:0000842,7.33e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.97e-59;42!CL:0000049;6.34e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-42!102;UBERON:0003061!1.14e-42!102;UBERON:0002193!1.24e-39!112;UBERON:0002371!2.34e-30!80;UBERON:0001474!4.61e-27!86;UBERON:0007023!1.12e-25!115;UBERON:0002405!6.00e-24!115;UBERON:0004765!1.31e-20!101;UBERON:0001434!1.31e-20!101;UBERON:0003081!6.23e-14!216;UBERON:0000178!9.27e-12!15;UBERON:0000179!9.27e-12!15;UBERON:0000463!9.27e-12!15;UBERON:0002204!3.04e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.73e-20;15!UBERON:0000179;7.73e-20;15!UBERON:0000463;7.73e-20;15!UBERON:0002390;7.27e-12;32!UBERON:0002193;5.30e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-68,98;UBERON:0003061,1.34e-68,98;UBERON:0002193,3.43e-63,108;UBERON:0002371,3.08e-48,76;UBERON:0002405,3.03e-45,93;UBERON:0001474,7.94e-44,82;UBERON:0004765,7.40e-39,90;UBERON:0001434,9.21e-34,100;UBERON:0003081,3.67e-25,203;UBERON:0000178,7.81e-20,15;UBERON:0000179,7.81e-20,15;UBERON:0000463,7.81e-20,15;UBERON:0002204,1.73e-15,167;UBERON:0000926,2.73e-12,315;UBERON:0004120,2.73e-12,315;UBERON:0006603,2.73e-12,315;UBERON:0002384,3.77e-12,371 | |||
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|short_description=p1@CLEC4D | |||
}} |
Revision as of 00:45, 11 September 2013
Short description: | p1@CLEC4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CLEC4D_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000299665, NM_080387, uc001qun.2_5end |
EntrezGene: | CLEC4D |
HGNC: | 14554 |
UniProt: | Q8WXI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-68 | 98 |
blood island | 1.34e-68 | 98 |
hemolymphoid system | 3.43e-63 | 108 |
bone marrow | 3.08e-48 | 76 |
immune system | 3.03e-45 | 93 |
bone element | 7.94e-44 | 82 |
skeletal element | 7.40e-39 | 90 |
skeletal system | 9.21e-34 | 100 |
lateral plate mesoderm | 3.67e-25 | 203 |
blood | 7.81e-20 | 15 |
haemolymphatic fluid | 7.81e-20 | 15 |
organism substance | 7.81e-20 | 15 |
musculoskeletal system | 1.73e-15 | 167 |
mesoderm | 2.73e-12 | 315 |
mesoderm-derived structure | 2.73e-12 | 315 |
presumptive mesoderm | 2.73e-12 | 315 |
connective tissue | 3.77e-12 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.