FFCP PHASE1:Hg19::chr16:22825475..22825496,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9956|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5195|TSSclassifier=S|UniProt=Q9Y278|association_with_transcript=-1bp_to_ENST00000261374,ENST00000540146_5end|coexpression_cluster_id=C67|description=CAGE_peak_1_at_HS3ST2_5end|id=chr16:22825475..22825496,+|ontology_enrichment_celltype=CL:0002009!7.34e-20!65;CL:0002194!2.62e-19!63;CL:0000576!2.62e-19!63;CL:0000040!2.62e-19!63;CL:0000559!2.62e-19!63;CL:0000557!1.42e-18!71;CL:0000839!1.73e-17!70;CL:0002057!3.03e-16!42;CL:0000766!7.05e-16!76;CL:0000860!3.10e-14!45;CL:0000763!7.29e-07!112;CL:0000049!7.29e-07!112|ontology_enrichment_celltype_v019=CL:0000473;4.35e-20;39!CL:0000234;4.35e-20;39!CL:0000860;3.35e-19;33!CL:0002057;3.35e-19;33!CL:0000576;1.49e-12;48!CL:0000766;3.07e-08;69!CL:0000235;1.02e-07;6|ontology_enrichment_celltype_v019_2=CL:0002194,8.45e-25,59;CL:0000576,8.45e-25,59;CL:0000040,8.45e-25,59;CL:0000559,8.45e-25,59;CL:0002009,1.39e-24,61;CL:0000473,2.96e-23,48;CL:0000234,2.96e-23,48;CL:0000557,5.53e-21,67;CL:0000839,1.53e-20,66;CL:0000860,9.58e-18,42;CL:0002057,9.58e-18,42;CL:0000766,1.37e-17,72;CL:0000763,8.00e-08,108;CL:0000049,8.00e-08,108;CL:0000235,9.65e-08,6|ontology_enrichment_development_v019=CL:0002057;2.17e-13;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.76e-37!115;UBERON:0001049!1.48e-19!57;UBERON:0005068!1.48e-19!57;UBERON:0006241!1.48e-19!57;UBERON:0007135!1.48e-19!57;UBERON:0001017!3.22e-18!82;UBERON:0005743!2.05e-17!86;UBERON:0000468!1.09e-16!659;UBERON:0000062!1.64e-16!511;UBERON:0000073!2.43e-16!94;UBERON:0001016!2.43e-16!94;UBERON:0002619!3.63e-16!22;UBERON:0000922!4.45e-16!612;UBERON:0003080!5.23e-16!42;UBERON:0001893!1.09e-15!34;UBERON:0002020!1.28e-15!34;UBERON:0003528!1.28e-15!34;UBERON:0002780!2.07e-15!41;UBERON:0001890!2.07e-15!41;UBERON:0006240!2.07e-15!41;UBERON:0002616!2.27e-15!59;UBERON:0001950!4.90e-15!20;UBERON:0001869!5.52e-15!32;UBERON:0002791!6.63e-15!33;UBERON:0002346!7.06e-15!90;UBERON:0000467!2.23e-14!625;UBERON:0002371!2.65e-14!80;UBERON:0000480!3.11e-14!626;UBERON:0002050!3.33e-14!605;UBERON:0005423!3.33e-14!605;UBERON:0003075!3.95e-14!86;UBERON:0007284!3.95e-14!86;UBERON:0000955!5.07e-14!69;UBERON:0006238!5.07e-14!69;UBERON:0000923!5.62e-14!604;UBERON:0005291!5.62e-14!604;UBERON:0006598!5.62e-14!604;UBERON:0002532!5.62e-14!604;UBERON:0001474!2.95e-13!86;UBERON:0000956!3.55e-13!25;UBERON:0000203!3.55e-13!25;UBERON:0004765!2.70e-12!101;UBERON:0001434!2.70e-12!101;UBERON:0000924!1.91e-11!173;UBERON:0006601!1.91e-11!173;UBERON:0004121!8.63e-11!169;UBERON:0003056!1.09e-09!61;UBERON:0002390!4.90e-09!102;UBERON:0003061!4.90e-09!102;UBERON:0000033!1.05e-08!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0002193!4.28e-08!112;UBERON:0002405!7.54e-08!115|ontology_enrichment_uberon_v019=UBERON:0002619;1.47e-20;22!UBERON:0001950;4.20e-19;20!UBERON:0000956;3.19e-17;25!UBERON:0000203;3.19e-17;25!UBERON:0003528;1.17e-15;34!UBERON:0002020;1.17e-15;34!UBERON:0001869;1.41e-15;32!UBERON:0001893;1.91e-15;34!UBERON:0002791;8.36e-15;32!UBERON:0002780;3.93e-11;41!UBERON:0001890;3.93e-11;41!UBERON:0000073;6.26e-10;53!UBERON:0002616;6.26e-10;53!UBERON:0007023;1.17e-08;114!UBERON:0000200;4.18e-08;6!UBERON:0001017;4.20e-07;75!UBERON:0001872;9.29e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.81e-30,114;UBERON:0002619,1.52e-20,22;UBERON:0001950,4.31e-19,20;UBERON:0001893,2.56e-18,34;UBERON:0001017,2.97e-18,81;UBERON:0003528,3.12e-18,34;UBERON:0002020,3.12e-18,34;UBERON:0001049,5.46e-18,56;UBERON:0005068,5.46e-18,56;UBERON:0006241,5.46e-18,56;UBERON:0007135,5.46e-18,56;UBERON:0001016,1.12e-17,89;UBERON:0001869,2.08e-17,32;UBERON:0000956,3.28e-17,25;UBERON:0000203,3.28e-17,25;UBERON:0002791,8.14e-17,32;UBERON:0002371,1.03e-16,76;UBERON:0000073,1.63e-16,53;UBERON:0002616,1.63e-16,53;UBERON:0010371,1.80e-16,104;UBERON:0004765,1.16e-15,90;UBERON:0001474,2.74e-15,82;UBERON:0002780,1.12e-14,41;UBERON:0001890,1.12e-14,41;UBERON:0003080,1.12e-14,41;UBERON:0006240,1.12e-14,41;UBERON:0001434,4.34e-14,100;UBERON:0003075,1.02e-13,82;UBERON:0007284,1.02e-13,82;UBERON:0000922,1.28e-13,592;UBERON:0000955,4.03e-13,68;UBERON:0006238,4.03e-13,68;UBERON:0002050,6.32e-13,564;UBERON:0005423,6.82e-13,581;UBERON:0002346,1.91e-12,86;UBERON:0002405,7.25e-12,93;UBERON:0000923,1.37e-11,560;UBERON:0010316,1.37e-11,560;UBERON:0005291,1.37e-11,560;UBERON:0006598,1.37e-11,560;UBERON:0010317,1.37e-11,560;UBERON:0002532,1.37e-11,560;UBERON:0004121,1.94e-10,171;UBERON:0000924,1.94e-10,171;UBERON:0006601,1.94e-10,171;UBERON:0002390,7.11e-10,98;UBERON:0003061,7.11e-10,98;UBERON:0003056,8.82e-10,61;UBERON:0002193,2.08e-08,108;UBERON:0000200,4.32e-08,6;UBERON:0010314,6.13e-08,132;UBERON:0001872,9.46e-07,5|phase1_expression=4.54195948176392,10.0627246228762,0.281908808191942,4.00293193412522,1.78784437770915,0,5.06599756336621,0,14.8875808073908,0.245733936501509,0,0,0,0,0,2.68930058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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9956 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5195 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y278 | |||
|association_with_transcript=-1bp_to_ENST00000261374,ENST00000540146_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_HS3ST2_5end | |||
|id=chr16:22825475..22825496,+ | |||
|ontology_enrichment_celltype=CL:0002009!7.34e-20!65;CL:0002194!2.62e-19!63;CL:0000576!2.62e-19!63;CL:0000040!2.62e-19!63;CL:0000559!2.62e-19!63;CL:0000557!1.42e-18!71;CL:0000839!1.73e-17!70;CL:0002057!3.03e-16!42;CL:0000766!7.05e-16!76;CL:0000860!3.10e-14!45;CL:0000763!7.29e-07!112;CL:0000049!7.29e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.35e-20;39!CL:0000234;4.35e-20;39!CL:0000860;3.35e-19;33!CL:0002057;3.35e-19;33!CL:0000576;1.49e-12;48!CL:0000766;3.07e-08;69!CL:0000235;1.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.45e-25,59;CL:0000576,8.45e-25,59;CL:0000040,8.45e-25,59;CL:0000559,8.45e-25,59;CL:0002009,1.39e-24,61;CL:0000473,2.96e-23,48;CL:0000234,2.96e-23,48;CL:0000557,5.53e-21,67;CL:0000839,1.53e-20,66;CL:0000860,9.58e-18,42;CL:0002057,9.58e-18,42;CL:0000766,1.37e-17,72;CL:0000763,8.00e-08,108;CL:0000049,8.00e-08,108;CL:0000235,9.65e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.76e-37!115;UBERON:0001049!1.48e-19!57;UBERON:0005068!1.48e-19!57;UBERON:0006241!1.48e-19!57;UBERON:0007135!1.48e-19!57;UBERON:0001017!3.22e-18!82;UBERON:0005743!2.05e-17!86;UBERON:0000468!1.09e-16!659;UBERON:0000062!1.64e-16!511;UBERON:0000073!2.43e-16!94;UBERON:0001016!2.43e-16!94;UBERON:0002619!3.63e-16!22;UBERON:0000922!4.45e-16!612;UBERON:0003080!5.23e-16!42;UBERON:0001893!1.09e-15!34;UBERON:0002020!1.28e-15!34;UBERON:0003528!1.28e-15!34;UBERON:0002780!2.07e-15!41;UBERON:0001890!2.07e-15!41;UBERON:0006240!2.07e-15!41;UBERON:0002616!2.27e-15!59;UBERON:0001950!4.90e-15!20;UBERON:0001869!5.52e-15!32;UBERON:0002791!6.63e-15!33;UBERON:0002346!7.06e-15!90;UBERON:0000467!2.23e-14!625;UBERON:0002371!2.65e-14!80;UBERON:0000480!3.11e-14!626;UBERON:0002050!3.33e-14!605;UBERON:0005423!3.33e-14!605;UBERON:0003075!3.95e-14!86;UBERON:0007284!3.95e-14!86;UBERON:0000955!5.07e-14!69;UBERON:0006238!5.07e-14!69;UBERON:0000923!5.62e-14!604;UBERON:0005291!5.62e-14!604;UBERON:0006598!5.62e-14!604;UBERON:0002532!5.62e-14!604;UBERON:0001474!2.95e-13!86;UBERON:0000956!3.55e-13!25;UBERON:0000203!3.55e-13!25;UBERON:0004765!2.70e-12!101;UBERON:0001434!2.70e-12!101;UBERON:0000924!1.91e-11!173;UBERON:0006601!1.91e-11!173;UBERON:0004121!8.63e-11!169;UBERON:0003056!1.09e-09!61;UBERON:0002390!4.90e-09!102;UBERON:0003061!4.90e-09!102;UBERON:0000033!1.05e-08!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0002193!4.28e-08!112;UBERON:0002405!7.54e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.47e-20;22!UBERON:0001950;4.20e-19;20!UBERON:0000956;3.19e-17;25!UBERON:0000203;3.19e-17;25!UBERON:0003528;1.17e-15;34!UBERON:0002020;1.17e-15;34!UBERON:0001869;1.41e-15;32!UBERON:0001893;1.91e-15;34!UBERON:0002791;8.36e-15;32!UBERON:0002780;3.93e-11;41!UBERON:0001890;3.93e-11;41!UBERON:0000073;6.26e-10;53!UBERON:0002616;6.26e-10;53!UBERON:0007023;1.17e-08;114!UBERON:0000200;4.18e-08;6!UBERON:0001017;4.20e-07;75!UBERON:0001872;9.29e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.81e-30,114;UBERON:0002619,1.52e-20,22;UBERON:0001950,4.31e-19,20;UBERON:0001893,2.56e-18,34;UBERON:0001017,2.97e-18,81;UBERON:0003528,3.12e-18,34;UBERON:0002020,3.12e-18,34;UBERON:0001049,5.46e-18,56;UBERON:0005068,5.46e-18,56;UBERON:0006241,5.46e-18,56;UBERON:0007135,5.46e-18,56;UBERON:0001016,1.12e-17,89;UBERON:0001869,2.08e-17,32;UBERON:0000956,3.28e-17,25;UBERON:0000203,3.28e-17,25;UBERON:0002791,8.14e-17,32;UBERON:0002371,1.03e-16,76;UBERON:0000073,1.63e-16,53;UBERON:0002616,1.63e-16,53;UBERON:0010371,1.80e-16,104;UBERON:0004765,1.16e-15,90;UBERON:0001474,2.74e-15,82;UBERON:0002780,1.12e-14,41;UBERON:0001890,1.12e-14,41;UBERON:0003080,1.12e-14,41;UBERON:0006240,1.12e-14,41;UBERON:0001434,4.34e-14,100;UBERON:0003075,1.02e-13,82;UBERON:0007284,1.02e-13,82;UBERON:0000922,1.28e-13,592;UBERON:0000955,4.03e-13,68;UBERON:0006238,4.03e-13,68;UBERON:0002050,6.32e-13,564;UBERON:0005423,6.82e-13,581;UBERON:0002346,1.91e-12,86;UBERON:0002405,7.25e-12,93;UBERON:0000923,1.37e-11,560;UBERON:0010316,1.37e-11,560;UBERON:0005291,1.37e-11,560;UBERON:0006598,1.37e-11,560;UBERON:0010317,1.37e-11,560;UBERON:0002532,1.37e-11,560;UBERON:0004121,1.94e-10,171;UBERON:0000924,1.94e-10,171;UBERON:0006601,1.94e-10,171;UBERON:0002390,7.11e-10,98;UBERON:0003061,7.11e-10,98;UBERON:0003056,8.82e-10,61;UBERON:0002193,2.08e-08,108;UBERON:0000200,4.32e-08,6;UBERON:0010314,6.13e-08,132;UBERON:0001872,9.46e-07,5 | |||
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| |||
|short_description=p1@HS3ST2 | |||
}} |
Revision as of 09:42, 11 September 2013
Short description: | p1@HS3ST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HS3ST2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -1bp_to_ENST00000261374, ENST00000540146_5end |
EntrezGene: | HS3ST2 |
HGNC: | 5195 |
UniProt: | Q9Y278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.45e-25 | 59 |
monocyte | 8.45e-25 | 59 |
monoblast | 8.45e-25 | 59 |
promonocyte | 8.45e-25 | 59 |
macrophage dendritic cell progenitor | 1.39e-24 | 61 |
defensive cell | 2.96e-23 | 48 |
phagocyte | 2.96e-23 | 48 |
granulocyte monocyte progenitor cell | 5.53e-21 | 67 |
myeloid lineage restricted progenitor cell | 1.53e-20 | 66 |
classical monocyte | 9.58e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.58e-18 | 42 |
myeloid leukocyte | 1.37e-17 | 72 |
myeloid cell | 8.00e-08 | 108 |
common myeloid progenitor | 8.00e-08 | 108 |
macrophage | 9.65e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.