FFCP PHASE1:Hg19::chr19:53606636..53606692,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12948 | |||
|TSSclassifier=S | |||
|UniProt=Q9BVY9,Q9HCG1 | |||
|association_with_transcript=0bp_to_ENST00000355147,ENST00000418871,ENST00000429604,NM_001102603,NM_033288,NM_198893,uc002qaq.3,uc002qar.3,uc002qas.3,uc010eqk.2_5end | |||
|coexpression_cluster_id=C1826 | |||
|description=CAGE_peak_1_at_ZNF160_5end | |||
|id=chr19:53606636..53606692,- | |||
|ontology_enrichment_celltype=CL:0000838!1.30e-08!52;CL:0000542!2.41e-08!53;CL:0000051!2.41e-08!53;CL:0000791!2.99e-07!18;CL:0000789!2.99e-07!18;CL:0002420!2.99e-07!18;CL:0002419!2.99e-07!18;CL:0000790!2.99e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.05e-07;18!CL:0000789;3.05e-07;18!CL:0002419;3.05e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.30e-08,52;CL:0000542,2.41e-08,53;CL:0000051,2.41e-08,53;CL:0000791,2.99e-07,18;CL:0000789,2.99e-07,18;CL:0002420,2.99e-07,18;CL:0002419,2.99e-07,18;CL:0000790,2.99e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;3.05e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@ZNF160 | |||
}} |
Revision as of 22:12, 11 September 2013
Short description: | p1@ZNF160 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZNF160_5end |
Coexpression cluster: | C1826_Neutrophils_parietal_lung_occipital_cerebellum_temporal_CD4 |
Association with transcript: | 0bp_to_ENST00000355147, ENST00000418871, ENST00000429604, NM_001102603, NM_033288, NM_198893, uc002qaq.3, uc002qar.3, uc002qas.3, uc010eqk.2_5end |
EntrezGene: | ZNF160 |
HGNC: | 12948 |
UniProt: | Q9BVY9Q9HCG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.30e-08 | 52 |
lymphocyte | 2.41e-08 | 53 |
common lymphoid progenitor | 2.41e-08 | 53 |
mature alpha-beta T cell | 2.99e-07 | 18 |
alpha-beta T cell | 2.99e-07 | 18 |
immature T cell | 2.99e-07 | 18 |
mature T cell | 2.99e-07 | 18 |
immature alpha-beta T cell | 2.99e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.95e-29 | 114 |
central nervous system | 9.37e-18 | 81 |
neural tube | 1.51e-17 | 56 |
neural rod | 1.51e-17 | 56 |
future spinal cord | 1.51e-17 | 56 |
neural keel | 1.51e-17 | 56 |
regional part of nervous system | 3.13e-16 | 53 |
regional part of brain | 3.13e-16 | 53 |
nervous system | 1.27e-15 | 89 |
brain | 6.03e-15 | 68 |
future brain | 6.03e-15 | 68 |
regional part of forebrain | 8.00e-15 | 41 |
forebrain | 8.00e-15 | 41 |
anterior neural tube | 8.00e-15 | 41 |
future forebrain | 8.00e-15 | 41 |
telencephalon | 1.10e-11 | 34 |
brain grey matter | 1.26e-11 | 34 |
gray matter | 1.26e-11 | 34 |
regional part of telencephalon | 7.20e-11 | 32 |
neural plate | 1.31e-10 | 82 |
presumptive neural plate | 1.31e-10 | 82 |
cerebral hemisphere | 1.41e-10 | 32 |
neurectoderm | 3.96e-10 | 86 |
regional part of cerebral cortex | 1.16e-08 | 22 |
neocortex | 3.72e-08 | 20 |
pre-chordal neural plate | 5.89e-08 | 61 |
cerebral cortex | 6.99e-08 | 25 |
pallium | 6.99e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.