FFCP PHASE1:Hg19::chr1:183559642..183559653,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4688|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7661|TSSclassifier=S|UniProt=P19878|association_with_transcript=62bp_to_ENST00000367535_5end|coexpression_cluster_id=C26|description=CAGE_peak_4_at_NCF2_5end|id=chr1:183559642..183559653,-|ontology_enrichment_celltype=CL:0000738!1.77e-49!140;CL:0000037!9.78e-48!172;CL:0000566!9.78e-48!172;CL:0002032!8.84e-47!165;CL:0000837!8.84e-47!165;CL:0000766!8.30e-46!76;CL:0000988!3.92e-45!182;CL:0002009!1.80e-44!65;CL:0000763!1.00e-43!112;CL:0000049!1.00e-43!112;CL:0002087!3.27e-43!119;CL:0002194!4.18e-43!63;CL:0000576!4.18e-43!63;CL:0000040!4.18e-43!63;CL:0000559!4.18e-43!63;CL:0000557!2.90e-39!71;CL:0002031!3.11e-38!124;CL:0000839!5.67e-37!70;CL:0002057!8.74e-37!42;CL:0000860!5.37e-34!45;CL:0000094!4.08e-08!8;CL:0002393!5.07e-08!9;CL:0002397!5.07e-08!9;CL:0000990!1.98e-07!8;CL:0000451!7.54e-07!10|ontology_enrichment_celltype_v019=CL:0000860;8.73e-46;33!CL:0002057;8.73e-46;33!CL:0000473;2.61e-45;39!CL:0000234;2.61e-45;39!CL:0000576;7.37e-43;48!CL:0000766;1.04e-33;69!CL:0000763;1.60e-20;100!CL:0002087;9.62e-19;104!CL:0000738;2.47e-18;136!CL:0000094;1.01e-12;8!CL:0000988;4.71e-12;177!CL:0000990;1.24e-11;8!CL:0000451;4.07e-11;10!CL:0000235;7.46e-10;6!CL:0000840;3.66e-09;5!CL:0002393;6.06e-09;6!CL:0002397;6.06e-09;6!CL:0000081;1.02e-08;11!CL:0000219;1.48e-08;193|ontology_enrichment_celltype_v019_2=CL:0000766,2.05e-84,72;CL:0002009,2.19e-82,61;CL:0000738,2.95e-80,136;CL:0002194,4.69e-80,59;CL:0000576,4.69e-80,59;CL:0000040,4.69e-80,59;CL:0000559,4.69e-80,59;CL:0000763,2.14e-76,108;CL:0000049,2.14e-76,108;CL:0000037,1.15e-75,168;CL:0000557,3.32e-73,67;CL:0002032,4.60e-73,161;CL:0000837,4.60e-73,161;CL:0000988,9.98e-72,177;CL:0000473,1.27e-70,48;CL:0000234,1.27e-70,48;CL:0000839,1.72e-69,66;CL:0002087,1.62e-68,115;CL:0002031,1.49e-62,120;CL:0000860,8.29e-62,42;CL:0002057,8.29e-62,42;CL:0000134,8.28e-21,354;CL:0002320,7.59e-20,361;CL:0000219,1.74e-16,386;CL:0000094,9.89e-13,8;CL:0002393,1.43e-12,9;CL:0002397,1.43e-12,9;CL:0000048,1.85e-12,427;CL:0000723,2.22e-12,433;CL:0000034,4.01e-12,441;CL:0000990,1.45e-11,8;CL:0000451,5.44e-11,10;CL:0000235,7.04e-10,6;CL:0000840,2.96e-09,5;CL:0001029,2.96e-09,5;CL:0000081,1.01e-08,11|ontology_enrichment_development_v019=CL:0002057;2.23e-44;42!CL:0000049;1.20e-21;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.38e-44!102;UBERON:0003061!1.38e-44!102;UBERON:0002193!8.77e-40!112;UBERON:0002371!6.04e-33!80;UBERON:0001474!1.08e-28!86;UBERON:0004765!1.15e-22!101;UBERON:0001434!1.15e-22!101;UBERON:0002405!1.80e-21!115;UBERON:0007023!1.71e-19!115;UBERON:0000178!4.99e-11!15;UBERON:0000179!4.99e-11!15;UBERON:0000463!4.99e-11!15;UBERON:0003081!1.25e-10!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-14;15!UBERON:0000179;1.81e-14;15!UBERON:0000463;1.81e-14;15!UBERON:0002390;1.38e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.17e-80,98;UBERON:0003061,2.17e-80,98;UBERON:0002193,9.95e-73,108;UBERON:0002371,3.50e-64,76;UBERON:0002405,3.47e-58,93;UBERON:0001474,5.50e-58,82;UBERON:0004765,5.16e-51,90;UBERON:0001434,7.04e-44,100;UBERON:0003081,1.01e-31,203;UBERON:0002384,3.27e-19,371;UBERON:0002204,1.64e-18,167;UBERON:0000178,2.28e-14,15;UBERON:0000179,2.28e-14,15;UBERON:0000463,2.28e-14,15;UBERON:0000926,1.48e-12,315;UBERON:0004120,1.48e-12,315;UBERON:0006603,1.48e-12,315|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,10.3922231817214,10.1804730917933,9.60271532026887,13.7677496897116,4.98978217526377,7.1215416725395,0,0,1.10926203050036,0,0,0,7.20194031091441,11.6315779532682,9.76548918221333,20.1523926815932,22.0247692892906,22.4090743841742,39.6937191868212,42.3221056931467,34.4469366886699,44.8588041227971,35.360438369877,29.4221052350348,44.8800132022555,44.8281236425926,32.1615832648476,41.7142273691308,25.1739026597692,28.4395621848118,41.7897993784582,36.8423302578092,32.5849052445373,37.9544026539919,43.0044896281965,31.327519164153,42.2209664238997,46.8739595410835,34.9504295436809,63.8460324982885,42.5538918518355,35.5008681927478,38.6922944495385,32.8534238604727,33.6642709292931,53.2751562317365,54.8733677621471,41.4565727547559,25.9844002163688,24.44949449598,19.9175713232957,36.6191337537574,35.89227738912,38.4134152206022,13.3955989558387,18.3003343023163,11.6905058409366,0,2.18455444504853,0,2.13365111283254,1.60158394814405,1.14950487990897,1.32208974556972,0,0.569212969109448,0.587237189370939,0,0,1.12101712596307,0.526768169550154,0,0.393010762749165,0.822405995998037,0.668745981562712,0,0,0,1.22551502573691,0.294605907474837,0.443067789167242,0.270803863765016,0.896639238079726,0.910415432919148,0,0.276350017785848,0.869409257205157,0.14828656316206,0,0,0.339928028092699,0,0.34362744548263,0,0.95569624297229,0,0,2.25862678616659,1.02389288923535,1.24930726552346,4.02521328474829,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |||
|TSSclassifier=S | |||
|UniProt=P19878 | |||
|association_with_transcript=62bp_to_ENST00000367535_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_NCF2_5end | |||
|id=chr1:183559642..183559653,- | |||
|ontology_enrichment_celltype=CL:0000738!1.77e-49!140;CL:0000037!9.78e-48!172;CL:0000566!9.78e-48!172;CL:0002032!8.84e-47!165;CL:0000837!8.84e-47!165;CL:0000766!8.30e-46!76;CL:0000988!3.92e-45!182;CL:0002009!1.80e-44!65;CL:0000763!1.00e-43!112;CL:0000049!1.00e-43!112;CL:0002087!3.27e-43!119;CL:0002194!4.18e-43!63;CL:0000576!4.18e-43!63;CL:0000040!4.18e-43!63;CL:0000559!4.18e-43!63;CL:0000557!2.90e-39!71;CL:0002031!3.11e-38!124;CL:0000839!5.67e-37!70;CL:0002057!8.74e-37!42;CL:0000860!5.37e-34!45;CL:0000094!4.08e-08!8;CL:0002393!5.07e-08!9;CL:0002397!5.07e-08!9;CL:0000990!1.98e-07!8;CL:0000451!7.54e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.73e-46;33!CL:0002057;8.73e-46;33!CL:0000473;2.61e-45;39!CL:0000234;2.61e-45;39!CL:0000576;7.37e-43;48!CL:0000766;1.04e-33;69!CL:0000763;1.60e-20;100!CL:0002087;9.62e-19;104!CL:0000738;2.47e-18;136!CL:0000094;1.01e-12;8!CL:0000988;4.71e-12;177!CL:0000990;1.24e-11;8!CL:0000451;4.07e-11;10!CL:0000235;7.46e-10;6!CL:0000840;3.66e-09;5!CL:0002393;6.06e-09;6!CL:0002397;6.06e-09;6!CL:0000081;1.02e-08;11!CL:0000219;1.48e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.05e-84,72;CL:0002009,2.19e-82,61;CL:0000738,2.95e-80,136;CL:0002194,4.69e-80,59;CL:0000576,4.69e-80,59;CL:0000040,4.69e-80,59;CL:0000559,4.69e-80,59;CL:0000763,2.14e-76,108;CL:0000049,2.14e-76,108;CL:0000037,1.15e-75,168;CL:0000557,3.32e-73,67;CL:0002032,4.60e-73,161;CL:0000837,4.60e-73,161;CL:0000988,9.98e-72,177;CL:0000473,1.27e-70,48;CL:0000234,1.27e-70,48;CL:0000839,1.72e-69,66;CL:0002087,1.62e-68,115;CL:0002031,1.49e-62,120;CL:0000860,8.29e-62,42;CL:0002057,8.29e-62,42;CL:0000134,8.28e-21,354;CL:0002320,7.59e-20,361;CL:0000219,1.74e-16,386;CL:0000094,9.89e-13,8;CL:0002393,1.43e-12,9;CL:0002397,1.43e-12,9;CL:0000048,1.85e-12,427;CL:0000723,2.22e-12,433;CL:0000034,4.01e-12,441;CL:0000990,1.45e-11,8;CL:0000451,5.44e-11,10;CL:0000235,7.04e-10,6;CL:0000840,2.96e-09,5;CL:0001029,2.96e-09,5;CL:0000081,1.01e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-44;42!CL:0000049;1.20e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-44!102;UBERON:0003061!1.38e-44!102;UBERON:0002193!8.77e-40!112;UBERON:0002371!6.04e-33!80;UBERON:0001474!1.08e-28!86;UBERON:0004765!1.15e-22!101;UBERON:0001434!1.15e-22!101;UBERON:0002405!1.80e-21!115;UBERON:0007023!1.71e-19!115;UBERON:0000178!4.99e-11!15;UBERON:0000179!4.99e-11!15;UBERON:0000463!4.99e-11!15;UBERON:0003081!1.25e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-14;15!UBERON:0000179;1.81e-14;15!UBERON:0000463;1.81e-14;15!UBERON:0002390;1.38e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.17e-80,98;UBERON:0003061,2.17e-80,98;UBERON:0002193,9.95e-73,108;UBERON:0002371,3.50e-64,76;UBERON:0002405,3.47e-58,93;UBERON:0001474,5.50e-58,82;UBERON:0004765,5.16e-51,90;UBERON:0001434,7.04e-44,100;UBERON:0003081,1.01e-31,203;UBERON:0002384,3.27e-19,371;UBERON:0002204,1.64e-18,167;UBERON:0000178,2.28e-14,15;UBERON:0000179,2.28e-14,15;UBERON:0000463,2.28e-14,15;UBERON:0000926,1.48e-12,315;UBERON:0004120,1.48e-12,315;UBERON:0006603,1.48e-12,315 | |||
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| |||
|short_description=p4@NCF2 | |||
}} |
Revision as of 02:14, 12 September 2013
Short description: | p4@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NCF2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 62bp_to_ENST00000367535_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.17e-80 | 98 |
blood island | 2.17e-80 | 98 |
hemolymphoid system | 9.95e-73 | 108 |
bone marrow | 3.50e-64 | 76 |
immune system | 3.47e-58 | 93 |
bone element | 5.50e-58 | 82 |
skeletal element | 5.16e-51 | 90 |
skeletal system | 7.04e-44 | 100 |
lateral plate mesoderm | 1.01e-31 | 203 |
connective tissue | 3.27e-19 | 371 |
musculoskeletal system | 1.64e-18 | 167 |
blood | 2.28e-14 | 15 |
haemolymphatic fluid | 2.28e-14 | 15 |
organism substance | 2.28e-14 | 15 |
mesoderm | 1.48e-12 | 315 |
mesoderm-derived structure | 1.48e-12 | 315 |
presumptive mesoderm | 1.48e-12 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.