FFCP PHASE1:Hg19::chr22:38369134..38369144,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C327|description=CAGE_peak_at_chr22:38369134..38369144,-|id=chr22:38369134..38369144,-|ontology_enrichment_celltype=CL:0000147!4.40e-18!14;CL:0000148!2.70e-17!10;CL:0000541!2.70e-17!10;CL:0000710!7.49e-08!20|ontology_enrichment_celltype_v019=CL:0000148;7.26e-36;10!CL:0000147;1.52e-25;14!CL:0000710;8.77e-18;20!CL:0002567;3.86e-14;3!CL:0000075;4.48e-13;27!CL:0002566;3.11e-11;1!CL:0002077;9.66e-10;34|ontology_enrichment_celltype_v019_2=CL:0000148,6.87e-36,10;CL:0000541,6.87e-36,10;CL:0000147,1.47e-25,14;CL:0000710,8.54e-18,20;CL:0002567,4.14e-14,3;CL:0000075,4.39e-13,27;CL:0002566,2.68e-11,1;CL:0002077,2.64e-10,34;CL:0000333,4.69e-08,41|ontology_enrichment_development_v019=UBERON:0006298;1.24e-11;1!UBERON:0008801;1.24e-11;1!UBERON:0006601;2.15e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.48e-58!115;UBERON:0001049!1.69e-53!57;UBERON:0005068!1.69e-53!57;UBERON:0006241!1.69e-53!57;UBERON:0007135!1.69e-53!57;UBERON:0005743!1.76e-49!86;UBERON:0001017!6.67e-45!82;UBERON:0000073!9.92e-44!94;UBERON:0001016!9.92e-44!94;UBERON:0003075!9.03e-43!86;UBERON:0007284!9.03e-43!86;UBERON:0002616!2.95e-42!59;UBERON:0002020!5.71e-41!34;UBERON:0003528!5.71e-41!34;UBERON:0001893!9.69e-41!34;UBERON:0002346!2.25e-40!90;UBERON:0000955!4.84e-39!69;UBERON:0006238!4.84e-39!69;UBERON:0002780!5.04e-39!41;UBERON:0001890!5.04e-39!41;UBERON:0006240!5.04e-39!41;UBERON:0002791!1.09e-38!33;UBERON:0003080!6.21e-38!42;UBERON:0001869!3.10e-36!32;UBERON:0000033!3.47e-31!123;UBERON:0000153!9.34e-31!129;UBERON:0007811!9.34e-31!129;UBERON:0003056!2.71e-30!61;UBERON:0004121!5.91e-30!169;UBERON:0002619!3.66e-29!22;UBERON:0000924!5.85e-29!173;UBERON:0006601!5.85e-29!173;UBERON:0000956!2.95e-25!25;UBERON:0000203!2.95e-25!25;UBERON:0001950!1.39e-24!20;UBERON:0002308!5.04e-18!9;UBERON:0000125!5.04e-18!9;UBERON:0002420!5.78e-18!9;UBERON:0007245!5.78e-18!9;UBERON:0010009!5.78e-18!9;UBERON:0010011!5.78e-18!9;UBERON:0000454!5.78e-18!9;UBERON:0003076!3.26e-16!15;UBERON:0003057!3.26e-16!15;UBERON:0000200!1.57e-15!6;UBERON:0000349!1.45e-13!5;UBERON:0009663!3.19e-13!7;UBERON:0002298!8.83e-12!8;UBERON:0001871!1.18e-11!7;UBERON:0000369!1.34e-10!4;UBERON:0002435!1.34e-10!4;UBERON:0000204!1.34e-10!4;UBERON:0010082!1.34e-10!4;UBERON:0004111!1.61e-10!241;UBERON:0004733!4.72e-10!12;UBERON:0002028!4.72e-10!12;UBERON:0007277!4.72e-10!12;UBERON:0000025!1.19e-09!194;UBERON:0000475!2.41e-09!365;UBERON:0004732!3.42e-09!13;UBERON:0006331!3.85e-09!3;UBERON:0002240!4.07e-09!3;UBERON:0002771!1.12e-08!3;UBERON:0000988!1.15e-08!3;UBERON:0005383!1.21e-08!3;UBERON:0005382!1.21e-08!3;UBERON:0000477!2.26e-08!286;UBERON:0001872!2.73e-08!5;UBERON:0006947!4.50e-08!3;UBERON:0004054!4.50e-08!3;UBERON:0000064!5.88e-08!219;UBERON:0002680!3.42e-07!9;UBERON:0001895!3.42e-07!9;UBERON:0010092!3.42e-07!9;UBERON:0001829!4.62e-07!2;UBERON:0000062!8.49e-07!511;UBERON:0001954!9.59e-07!2;UBERON:0003022!9.59e-07!2;UBERON:0002421!9.59e-07!2;UBERON:0002600!9.59e-07!2|ontology_enrichment_uberon_v019=UBERON:0001829;1.69e-21;2!UBERON:0003528;1.01e-13;34!UBERON:0002020;1.01e-13;34!UBERON:0002791;1.37e-13;32!UBERON:0001831;1.24e-11;1!UBERON:0001736;1.24e-11;1!UBERON:0001567;1.24e-11;1!UBERON:0002038;3.11e-11;1!UBERON:0009661;3.11e-11;1!UBERON:0002950;3.11e-11;1!UBERON:0001891;3.11e-11;1!UBERON:0000073;5.36e-11;53!UBERON:0002616;5.36e-11;53!UBERON:0001893;5.44e-11;34!UBERON:0002780;1.05e-10;41!UBERON:0001890;1.05e-10;41!UBERON:0002619;1.21e-10;22!UBERON:0002420;1.36e-10;9!UBERON:0000125;1.36e-10;9!UBERON:0007245;1.36e-10;9!UBERON:0002308;1.36e-10;9!UBERON:0010009;1.36e-10;9!UBERON:0010011;1.36e-10;9!UBERON:0000454;1.36e-10;9!UBERON:0001869;1.36e-10;32!UBERON:0000956;2.11e-09;25!UBERON:0000203;2.11e-09;25!UBERON:0000349;7.54e-09;5!UBERON:0001044;8.95e-08;6!UBERON:0003293;8.95e-08;6!UBERON:0003294;8.95e-08;6!UBERON:0010047;8.95e-08;6!UBERON:0003408;8.95e-08;6!UBERON:0000167;8.95e-08;6!UBERON:0001950;9.53e-08;20!UBERON:0000200;1.63e-07;6!UBERON:0002298;1.63e-07;6!UBERON:0001017;1.97e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.08e-21,2;UBERON:0001049,2.50e-19,56;UBERON:0005068,2.50e-19,56;UBERON:0006241,2.50e-19,56;UBERON:0007135,2.50e-19,56;UBERON:0003528,3.20e-17,34;UBERON:0002020,3.20e-17,34;UBERON:0000073,7.11e-17,53;UBERON:0002616,7.11e-17,53;UBERON:0002780,3.49e-14,41;UBERON:0001890,3.49e-14,41;UBERON:0003080,3.49e-14,41;UBERON:0006240,3.49e-14,41;UBERON:0002791,3.92e-14,32;UBERON:0001893,2.75e-13,34;UBERON:0001017,8.99e-13,81;UBERON:0003075,8.99e-13,82;UBERON:0007284,8.99e-13,82;UBERON:0000955,1.06e-12,68;UBERON:0006238,1.06e-12,68;UBERON:0002346,4.13e-12,86;UBERON:0010371,9.88e-12,104;UBERON:0001736,1.31e-11,1;UBERON:0006298,1.31e-11,1;UBERON:0001831,1.45e-11,1;UBERON:0001567,1.45e-11,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr22:38369134..38369144,- | |||
|id=chr22:38369134..38369144,- | |||
|ontology_enrichment_celltype=CL:0000147!4.40e-18!14;CL:0000148!2.70e-17!10;CL:0000541!2.70e-17!10;CL:0000710!7.49e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.26e-36;10!CL:0000147;1.52e-25;14!CL:0000710;8.77e-18;20!CL:0002567;3.86e-14;3!CL:0000075;4.48e-13;27!CL:0002566;3.11e-11;1!CL:0002077;9.66e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.87e-36,10;CL:0000541,6.87e-36,10;CL:0000147,1.47e-25,14;CL:0000710,8.54e-18,20;CL:0002567,4.14e-14,3;CL:0000075,4.39e-13,27;CL:0002566,2.68e-11,1;CL:0002077,2.64e-10,34;CL:0000333,4.69e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.24e-11;1!UBERON:0008801;1.24e-11;1!UBERON:0006601;2.15e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr22:38369134..38369144,- | |||
}} |
Revision as of 11:55, 12 September 2013
Short description: | p@chr22:38369134..38369144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:38369134..38369144, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.87e-36 | 10 |
melanoblast | 6.87e-36 | 10 |
pigment cell | 1.47e-25 | 14 |
neurecto-epithelial cell | 8.54e-18 | 20 |
light melanocyte | 4.14e-14 | 3 |
columnar/cuboidal epithelial cell | 4.39e-13 | 27 |
dark melanocyte | 2.68e-11 | 1 |
ecto-epithelial cell | 2.64e-10 | 34 |
migratory neural crest cell | 4.69e-08 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.