FFCP PHASE1:Mm9::chr10:59842970..59842980,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22295|HGNC=|MCL_coexpression_id=68|UniProt=|association_with_transcript=-30bp_to_ENSMUST00000124712_5end|description=CAGE_peak_3_at_Cdh23_5end|id=chr10:59842970..59842980,-|ontology_enrichment_celltype=CL:0000791!3.69e-35!9;CL:0000789!3.69e-35!9;CL:0002420!3.69e-35!9;CL:0002419!3.69e-35!9;CL:0000790!3.69e-35!9;CL:0000893!4.28e-34!6;CL:0002489!4.28e-34!6;CL:0000898!4.28e-34!6;CL:0000809!4.28e-34!6;CL:0000810!4.28e-34!6;CL:0000895!4.28e-34!6;CL:0000808!4.28e-34!6;CL:0000894!4.28e-34!6;CL:0000806!4.28e-34!6;CL:0000807!4.28e-34!6;CL:0000805!4.28e-34!6;CL:0002425!4.28e-34!6;CL:0002436!4.28e-34!6;CL:0002427!4.28e-34!6;CL:0002428!4.28e-34!6;CL:0002429!4.28e-34!6;CL:0002433!4.28e-34!6;CL:0002431!4.28e-34!6;CL:0002432!4.28e-34!6;CL:0000084!7.21e-29!11;CL:0000827!7.21e-29!11;CL:0000838!1.66e-26!12;CL:0000624!9.55e-26!8;CL:0000542!1.66e-24!13;CL:0000051!1.66e-24!13;CL:0000738!7.53e-19!17;CL:0002087!7.53e-19!17;CL:0000625!1.16e-13!1;CL:0002031!6.09e-13!25;CL:0000988!3.52e-10!32;CL:0002032!3.52e-10!32;CL:0000037!3.52e-10!32;CL:0000566!3.52e-10!32;CL:0000837!3.52e-10!32;CL:0002320!3.73e-07!46;CL:0000134!3.73e-07!46|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!8.95e-20!23;UBERON:0000974!8.95e-20!23;UBERON:0004807!8.95e-20!23;UBERON:0005058!8.95e-20!23;UBERON:0003351!8.95e-20!23;UBERON:0009113!8.95e-20!23;UBERON:0003295!8.95e-20!23;UBERON:0009722!8.95e-20!23;UBERON:0005562!8.95e-20!23;UBERON:0007690!8.95e-20!23;UBERON:0006562!5.78e-19!24;UBERON:0003408!5.78e-19!24;UBERON:0001557!5.78e-19!24;UBERON:0001042!5.78e-19!24;UBERON:0008814!5.78e-19!24;UBERON:0009145!5.78e-19!24;UBERON:0000072!6.81e-17!27;UBERON:0004177!9.49e-16!29;UBERON:0000063!4.28e-13!35;UBERON:0000065!3.27e-11!41;UBERON:0001004!5.99e-11!42;UBERON:0002390!3.12e-10!45;UBERON:0003061!3.12e-10!45;UBERON:0002193!1.33e-09!48;UBERON:0005057!4.78e-09!51;UBERON:0003929!2.12e-08!55;UBERON:0002368!1.04e-07!60;UBERON:0002384!3.73e-07!46;UBERON:0002530!4.02e-07!65;UBERON:0000490!5.14e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55|phase1_expression=0,0,0,0,0,0,0,0,8.16574588479667,6.08567768437183,7.36237263369671,1.83475965689274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302478555410522,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Cdh23}} | ||
|EntrezGene=22295 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENSMUST00000124712_5end | |||
|description=CAGE_peak_3_at_Cdh23_5end | |||
|id=chr10:59842970..59842980,- | |||
|ontology_enrichment_celltype=CL:0000791!3.69e-35!9;CL:0000789!3.69e-35!9;CL:0002420!3.69e-35!9;CL:0002419!3.69e-35!9;CL:0000790!3.69e-35!9;CL:0000893!4.28e-34!6;CL:0002489!4.28e-34!6;CL:0000898!4.28e-34!6;CL:0000809!4.28e-34!6;CL:0000810!4.28e-34!6;CL:0000895!4.28e-34!6;CL:0000808!4.28e-34!6;CL:0000894!4.28e-34!6;CL:0000806!4.28e-34!6;CL:0000807!4.28e-34!6;CL:0000805!4.28e-34!6;CL:0002425!4.28e-34!6;CL:0002436!4.28e-34!6;CL:0002427!4.28e-34!6;CL:0002428!4.28e-34!6;CL:0002429!4.28e-34!6;CL:0002433!4.28e-34!6;CL:0002431!4.28e-34!6;CL:0002432!4.28e-34!6;CL:0000084!7.21e-29!11;CL:0000827!7.21e-29!11;CL:0000838!1.66e-26!12;CL:0000624!9.55e-26!8;CL:0000542!1.66e-24!13;CL:0000051!1.66e-24!13;CL:0000738!7.53e-19!17;CL:0002087!7.53e-19!17;CL:0000625!1.16e-13!1;CL:0002031!6.09e-13!25;CL:0000988!3.52e-10!32;CL:0002032!3.52e-10!32;CL:0000037!3.52e-10!32;CL:0000566!3.52e-10!32;CL:0000837!3.52e-10!32;CL:0002320!3.73e-07!46;CL:0000134!3.73e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.95e-20!23;UBERON:0000974!8.95e-20!23;UBERON:0004807!8.95e-20!23;UBERON:0005058!8.95e-20!23;UBERON:0003351!8.95e-20!23;UBERON:0009113!8.95e-20!23;UBERON:0003295!8.95e-20!23;UBERON:0009722!8.95e-20!23;UBERON:0005562!8.95e-20!23;UBERON:0007690!8.95e-20!23;UBERON:0006562!5.78e-19!24;UBERON:0003408!5.78e-19!24;UBERON:0001557!5.78e-19!24;UBERON:0001042!5.78e-19!24;UBERON:0008814!5.78e-19!24;UBERON:0009145!5.78e-19!24;UBERON:0000072!6.81e-17!27;UBERON:0004177!9.49e-16!29;UBERON:0000063!4.28e-13!35;UBERON:0000065!3.27e-11!41;UBERON:0001004!5.99e-11!42;UBERON:0002390!3.12e-10!45;UBERON:0003061!3.12e-10!45;UBERON:0002193!1.33e-09!48;UBERON:0005057!4.78e-09!51;UBERON:0003929!2.12e-08!55;UBERON:0002368!1.04e-07!60;UBERON:0002384!3.73e-07!46;UBERON:0002530!4.02e-07!65;UBERON:0000490!5.14e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,8.16574588479667,6.08567768437183,7.36237263369671,1.83475965689274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302478555410522,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Cdh23 | |||
}} |
Revision as of 17:01, 12 September 2013
Short description: | p3@Cdh23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cdh23_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | -30bp_to_ENSMUST00000124712_5end |
EntrezGene: | Cdh23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.04e-16 | 23 |
neck | 6.04e-16 | 23 |
respiratory system epithelium | 6.04e-16 | 23 |
hemolymphoid system gland | 6.04e-16 | 23 |
pharyngeal epithelium | 6.04e-16 | 23 |
thymic region | 6.04e-16 | 23 |
pharyngeal gland | 6.04e-16 | 23 |
entire pharyngeal arch endoderm | 6.04e-16 | 23 |
thymus primordium | 6.04e-16 | 23 |
early pharyngeal endoderm | 6.04e-16 | 23 |
pharynx | 2.55e-15 | 24 |
gland of gut | 2.55e-15 | 24 |
upper respiratory tract | 2.55e-15 | 24 |
chordate pharynx | 2.55e-15 | 24 |
pharyngeal arch system | 2.55e-15 | 24 |
pharyngeal region of foregut | 2.55e-15 | 24 |
segment of respiratory tract | 1.02e-13 | 27 |
hemopoietic organ | 7.80e-13 | 29 |
immune organ | 7.80e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 8.81e-11 | 35 |
craniocervical region | 1.67e-10 | 36 |
respiratory tract | 2.53e-09 | 41 |
respiratory system | 4.04e-09 | 42 |
anterior region of body | 6.31e-09 | 43 |
hematopoietic system | 1.45e-08 | 45 |
blood island | 1.45e-08 | 45 |
connective tissue | 2.15e-08 | 46 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
gut epithelium | 3.83e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.