FFCP PHASE1:Mm9::chr11:86449013..86449037,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:86449013..86449037,-|id=chr11:86449013..86449037,-|ontology_enrichment_celltype=CL:0002453!2.63e-12!8;CL:0000128!1.15e-11!6;CL:0000126!1.15e-11!6;CL:0000127!1.15e-11!6;CL:0000333!1.10e-09!10;CL:0000095!1.10e-09!10;CL:0000243!1.10e-09!10;CL:0000123!1.10e-09!10;CL:0000125!1.10e-09!10;CL:0000030!1.10e-09!10;CL:0000339!1.10e-09!10;CL:0000192!4.02e-09!3;CL:0000359!4.02e-09!3;CL:0002539!4.02e-09!3;CL:0000514!4.02e-09!3;CL:0000680!1.21e-07!6;CL:0000183!1.21e-07!6;CL:0000187!1.21e-07!6;CL:0000056!1.21e-07!6;CL:0002604!6.26e-07!2;CL:0002605!6.26e-07!2|ontology_enrichment_celltype_v019_2=CL:0000192,4.27e-29,3;CL:0000359,4.27e-29,3;CL:0002539,4.27e-29,3;CL:0000514,4.27e-29,3;CL:0002605,4.07e-21,2;CL:0002604,4.07e-21,2;CL:0002453,2.39e-20,8;CL:0000708,3.91e-20,2;CL:0000333,2.26e-16,10;CL:0000095,2.26e-16,10;CL:0000243,2.26e-16,10;CL:0000123,2.26e-16,10;CL:0000125,2.26e-16,10;CL:0000030,2.26e-16,10;CL:0000339,2.26e-16,10;CL:0000128,1.02e-15,6;CL:0000126,1.02e-15,6;CL:0000127,1.02e-15,6;CL:0000680,6.09e-15,6;CL:0000187,6.09e-15,6;CL:0000056,6.09e-15,6;CL:0000151,8.96e-14,3;CL:0000499,8.96e-14,3;CL:0000327,8.96e-14,3;CL:0000222,6.58e-13,7;CL:0000355,3.46e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001135!4.02e-09!3;UBERON:0004237!4.02e-09!3;UBERON:0004695!4.02e-09!3;UBERON:0002111!4.02e-09!3;UBERON:0004178!4.02e-09!3;UBERON:0000947!6.45e-07!4;UBERON:0001637!6.45e-07!4;UBERON:0003509!6.45e-07!4;UBERON:0004573!6.45e-07!4;UBERON:0004571!6.45e-07!4;UBERON:0010191!6.45e-07!4;UBERON:0004572!6.45e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.27e-29,3;UBERON:0004237,4.27e-29,3;UBERON:0004695,4.27e-29,3;UBERON:0002111,4.27e-29,3;UBERON:0004178,4.27e-29,3;UBERON:0000947,4.95e-22,4;UBERON:0001637,4.95e-22,4;UBERON:0004573,4.95e-22,4;UBERON:0003509,4.95e-22,4;UBERON:0004571,4.95e-22,4;UBERON:0010191,4.95e-22,4;UBERON:0004572,4.95e-22,4;UBERON:0003210,3.91e-20,2;UBERON:0000055,8.80e-18,5;UBERON:0007500,8.80e-18,5;UBERON:0001981,8.80e-18,5;UBERON:0002049,8.80e-18,5;UBERON:0007798,8.80e-18,5;UBERON:0004537,8.80e-18,5;UBERON:0006965,8.80e-18,5;UBERON:0001134,3.46e-10,9;UBERON:0002036,3.46e-10,9;UBERON:0002385,3.46e-10,9;UBERON:0000486,3.46e-10,9;UBERON:0007503,3.46e-10,9;UBERON:0001015,3.46e-10,9;UBERON:0002329,3.46e-10,9;UBERON:0003082,3.46e-10,9;UBERON:0003059,3.46e-10,9;UBERON:0007282,3.46e-10,9;UBERON:0004290,3.46e-10,9;UBERON:0009618,3.46e-10,9;UBERON:0000383,3.13e-09,10;UBERON:0007524,1.90e-08,11;UBERON:0003077,1.90e-08,11;UBERON:0007285,1.90e-08,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.31790010585369,2.20256102594018,0.782391344348039,0.218025156380447,7.46933021297204,11.4713640453827,4.4795654920116,0,0,0,0,0,0,0.515672092277442,0,0,0,1.35537812827653,2.66788438833342,0,0,0.7104801149461,2.99600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:86449013..86449037,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:86449013..86449037,- | |||
|id=chr11:86449013..86449037,- | |||
|ontology_enrichment_celltype=CL:0002453!2.63e-12!8;CL:0000128!1.15e-11!6;CL:0000126!1.15e-11!6;CL:0000127!1.15e-11!6;CL:0000333!1.10e-09!10;CL:0000095!1.10e-09!10;CL:0000243!1.10e-09!10;CL:0000123!1.10e-09!10;CL:0000125!1.10e-09!10;CL:0000030!1.10e-09!10;CL:0000339!1.10e-09!10;CL:0000192!4.02e-09!3;CL:0000359!4.02e-09!3;CL:0002539!4.02e-09!3;CL:0000514!4.02e-09!3;CL:0000680!1.21e-07!6;CL:0000183!1.21e-07!6;CL:0000187!1.21e-07!6;CL:0000056!1.21e-07!6;CL:0002604!6.26e-07!2;CL:0002605!6.26e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.27e-29,3;CL:0000359,4.27e-29,3;CL:0002539,4.27e-29,3;CL:0000514,4.27e-29,3;CL:0002605,4.07e-21,2;CL:0002604,4.07e-21,2;CL:0002453,2.39e-20,8;CL:0000708,3.91e-20,2;CL:0000333,2.26e-16,10;CL:0000095,2.26e-16,10;CL:0000243,2.26e-16,10;CL:0000123,2.26e-16,10;CL:0000125,2.26e-16,10;CL:0000030,2.26e-16,10;CL:0000339,2.26e-16,10;CL:0000128,1.02e-15,6;CL:0000126,1.02e-15,6;CL:0000127,1.02e-15,6;CL:0000680,6.09e-15,6;CL:0000187,6.09e-15,6;CL:0000056,6.09e-15,6;CL:0000151,8.96e-14,3;CL:0000499,8.96e-14,3;CL:0000327,8.96e-14,3;CL:0000222,6.58e-13,7;CL:0000355,3.46e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!4.02e-09!3;UBERON:0004237!4.02e-09!3;UBERON:0004695!4.02e-09!3;UBERON:0002111!4.02e-09!3;UBERON:0004178!4.02e-09!3;UBERON:0000947!6.45e-07!4;UBERON:0001637!6.45e-07!4;UBERON:0003509!6.45e-07!4;UBERON:0004573!6.45e-07!4;UBERON:0004571!6.45e-07!4;UBERON:0010191!6.45e-07!4;UBERON:0004572!6.45e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.27e-29,3;UBERON:0004237,4.27e-29,3;UBERON:0004695,4.27e-29,3;UBERON:0002111,4.27e-29,3;UBERON:0004178,4.27e-29,3;UBERON:0000947,4.95e-22,4;UBERON:0001637,4.95e-22,4;UBERON:0004573,4.95e-22,4;UBERON:0003509,4.95e-22,4;UBERON:0004571,4.95e-22,4;UBERON:0010191,4.95e-22,4;UBERON:0004572,4.95e-22,4;UBERON:0003210,3.91e-20,2;UBERON:0000055,8.80e-18,5;UBERON:0007500,8.80e-18,5;UBERON:0001981,8.80e-18,5;UBERON:0002049,8.80e-18,5;UBERON:0007798,8.80e-18,5;UBERON:0004537,8.80e-18,5;UBERON:0006965,8.80e-18,5;UBERON:0001134,3.46e-10,9;UBERON:0002036,3.46e-10,9;UBERON:0002385,3.46e-10,9;UBERON:0000486,3.46e-10,9;UBERON:0007503,3.46e-10,9;UBERON:0001015,3.46e-10,9;UBERON:0002329,3.46e-10,9;UBERON:0003082,3.46e-10,9;UBERON:0003059,3.46e-10,9;UBERON:0007282,3.46e-10,9;UBERON:0004290,3.46e-10,9;UBERON:0009618,3.46e-10,9;UBERON:0000383,3.13e-09,10;UBERON:0007524,1.90e-08,11;UBERON:0003077,1.90e-08,11;UBERON:0007285,1.90e-08,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.31790010585369,2.20256102594018,0.782391344348039,0.218025156380447,7.46933021297204,11.4713640453827,4.4795654920116,0,0,0,0,0,0,0.515672092277442,0,0,0,1.35537812827653,2.66788438833342,0,0,0.7104801149461,2.99600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:86449013..86449037,- | |||
}} |
Revision as of 21:18, 12 September 2013
Short description: | p@chr11:86449013..86449037, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86449013..86449037, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.27e-29 | 3 |
vascular associated smooth muscle cell | 4.27e-29 | 3 |
aortic smooth muscle cell | 4.27e-29 | 3 |
smooth muscle myoblast | 4.27e-29 | 3 |
astrocyte of the cerebral cortex | 4.07e-21 | 2 |
astrocyte of the hippocampus | 4.07e-21 | 2 |
oligodendrocyte precursor cell | 2.39e-20 | 8 |
leptomeningeal cell | 3.91e-20 | 2 |
migratory neural crest cell | 2.26e-16 | 10 |
neuron associated cell | 2.26e-16 | 10 |
glial cell (sensu Vertebrata) | 2.26e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 2.26e-16 | 10 |
glial cell | 2.26e-16 | 10 |
glioblast | 2.26e-16 | 10 |
glioblast (sensu Vertebrata) | 2.26e-16 | 10 |
oligodendrocyte | 1.02e-15 | 6 |
macroglial cell | 1.02e-15 | 6 |
astrocyte | 1.02e-15 | 6 |
muscle precursor cell | 6.09e-15 | 6 |
muscle cell | 6.09e-15 | 6 |
myoblast | 6.09e-15 | 6 |
secretory cell | 8.96e-14 | 3 |
stromal cell | 8.96e-14 | 3 |
extracellular matrix secreting cell | 8.96e-14 | 3 |
mesodermal cell | 6.58e-13 | 7 |
multi-potent skeletal muscle stem cell | 3.46e-10 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.