FFCP PHASE1:Mm9::chr12:57636911..57636924,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=139|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:57636911..57636924,-|id=chr12:57636911..57636924,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.13e-22!17;UBERON:0005181!2.13e-22!17;UBERON:0002224!2.13e-22!17;UBERON:0000915!2.13e-22!17;UBERON:0008947!2.13e-22!17;UBERON:0003258!2.13e-22!17;UBERON:0002048!3.79e-19!14;UBERON:0000117!3.79e-19!14;UBERON:0000171!3.79e-19!14;UBERON:0000170!3.79e-19!14;UBERON:0005597!3.79e-19!14;UBERON:0000118!3.79e-19!14;UBERON:0005153!6.62e-15!17;UBERON:0000310!4.79e-09!6;UBERON:0001443!4.79e-09!6;UBERON:0001894!9.89e-09!10;UBERON:0006222!9.89e-09!10;UBERON:0005157!1.04e-07!27;UBERON:0002780!1.53e-07!39;UBERON:0001890!1.53e-07!39;UBERON:0006240!1.53e-07!39;UBERON:0000007!1.59e-07!8;UBERON:0003296!1.59e-07!8;UBERON:0010133!1.59e-07!8;UBERON:0000025!3.08e-07!114;UBERON:0003080!3.20e-07!40;UBERON:0000065!9.65e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.34e-54,17;UBERON:0005181,1.34e-54,17;UBERON:0002224,1.34e-54,17;UBERON:0000915,1.34e-54,17;UBERON:0008947,1.34e-54,17;UBERON:0003258,1.34e-54,17;UBERON:0002048,2.92e-51,14;UBERON:0000117,2.92e-51,14;UBERON:0000171,2.92e-51,14;UBERON:0000170,2.92e-51,14;UBERON:0005597,2.92e-51,14;UBERON:0000118,2.92e-51,14;UBERON:0005153,8.89e-42,17;UBERON:0005157,3.91e-35,20;UBERON:0000310,1.27e-22,6;UBERON:0001443,1.27e-22,6;UBERON:0000065,6.04e-21,41;UBERON:0001004,2.24e-20,42;UBERON:0000025,2.13e-12,114;UBERON:0009569,7.04e-12,66;UBERON:0004111,2.46e-11,122;UBERON:0005177,1.99e-09,79;UBERON:0001041,2.85e-09,80;UBERON:0005911,2.47e-08,69;UBERON:0002100,6.61e-08,90;UBERON:0011216,2.10e-07,194;UBERON:0002420,2.95e-07,8;UBERON:0007245,2.95e-07,8;UBERON:0010009,2.95e-07,8;UBERON:0010011,2.95e-07,8;UBERON:0000454,2.95e-07,8;UBERON:0000369,8.53e-07,5;UBERON:0002435,8.53e-07,5;UBERON:0000204,8.53e-07,5;UBERON:0010082,8.53e-07,5;UBERON:0000483,8.90e-07,174|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979926393719632,1.15014565221884,0,0,0,0,1.71452174049252,1.37231465403614,0.52091337055676,0,2.25105044012672,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,0.506719730950197,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0.390361328888111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,1.32643988239339,4.4000543639347,3.90413697282933,5.16318546234705,6.19773152534718,7.85544014923845,4.87834119644497,3.78324345854858,3.32197034473162,2.87018583583477,2.29408640602033,1.89953480052485,1.88043776155965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,4.01011919726539,2.57204442037911,0.886701168211368,0.356737635204141,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.62272408550506,0.798049746802062,0.853668028770671,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.749132059759059,0.256100609619477,0.574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.824171801606613,0.588795680537589,0,0.532427418478012,0.238436189947321,0.290692833264657,0.846984423737976,0.423073039458382,0.548783918618318,0.789209134313529,0.407412341537585,0,0.474540072496697,0,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr12:57636911..57636924,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=139 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:57636911..57636924,- | |||
|id=chr12:57636911..57636924,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.13e-22!17;UBERON:0005181!2.13e-22!17;UBERON:0002224!2.13e-22!17;UBERON:0000915!2.13e-22!17;UBERON:0008947!2.13e-22!17;UBERON:0003258!2.13e-22!17;UBERON:0002048!3.79e-19!14;UBERON:0000117!3.79e-19!14;UBERON:0000171!3.79e-19!14;UBERON:0000170!3.79e-19!14;UBERON:0005597!3.79e-19!14;UBERON:0000118!3.79e-19!14;UBERON:0005153!6.62e-15!17;UBERON:0000310!4.79e-09!6;UBERON:0001443!4.79e-09!6;UBERON:0001894!9.89e-09!10;UBERON:0006222!9.89e-09!10;UBERON:0005157!1.04e-07!27;UBERON:0002780!1.53e-07!39;UBERON:0001890!1.53e-07!39;UBERON:0006240!1.53e-07!39;UBERON:0000007!1.59e-07!8;UBERON:0003296!1.59e-07!8;UBERON:0010133!1.59e-07!8;UBERON:0000025!3.08e-07!114;UBERON:0003080!3.20e-07!40;UBERON:0000065!9.65e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.34e-54,17;UBERON:0005181,1.34e-54,17;UBERON:0002224,1.34e-54,17;UBERON:0000915,1.34e-54,17;UBERON:0008947,1.34e-54,17;UBERON:0003258,1.34e-54,17;UBERON:0002048,2.92e-51,14;UBERON:0000117,2.92e-51,14;UBERON:0000171,2.92e-51,14;UBERON:0000170,2.92e-51,14;UBERON:0005597,2.92e-51,14;UBERON:0000118,2.92e-51,14;UBERON:0005153,8.89e-42,17;UBERON:0005157,3.91e-35,20;UBERON:0000310,1.27e-22,6;UBERON:0001443,1.27e-22,6;UBERON:0000065,6.04e-21,41;UBERON:0001004,2.24e-20,42;UBERON:0000025,2.13e-12,114;UBERON:0009569,7.04e-12,66;UBERON:0004111,2.46e-11,122;UBERON:0005177,1.99e-09,79;UBERON:0001041,2.85e-09,80;UBERON:0005911,2.47e-08,69;UBERON:0002100,6.61e-08,90;UBERON:0011216,2.10e-07,194;UBERON:0002420,2.95e-07,8;UBERON:0007245,2.95e-07,8;UBERON:0010009,2.95e-07,8;UBERON:0010011,2.95e-07,8;UBERON:0000454,2.95e-07,8;UBERON:0000369,8.53e-07,5;UBERON:0002435,8.53e-07,5;UBERON:0000204,8.53e-07,5;UBERON:0010082,8.53e-07,5;UBERON:0000483,8.90e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979926393719632,1.15014565221884,0,0,0,0,1.71452174049252,1.37231465403614,0.52091337055676,0,2.25105044012672,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,0.506719730950197,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13088916901578,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0.390361328888111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,1.32643988239339,4.4000543639347,3.90413697282933,5.16318546234705,6.19773152534718,7.85544014923845,4.87834119644497,3.78324345854858,3.32197034473162,2.87018583583477,2.29408640602033,1.89953480052485,1.88043776155965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,4.01011919726539,2.57204442037911,0.886701168211368,0.356737635204141,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.62272408550506,0.798049746802062,0.853668028770671,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.749132059759059,0.256100609619477,0.574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.824171801606613,0.588795680537589,0,0.532427418478012,0.238436189947321,0.290692833264657,0.846984423737976,0.423073039458382,0.548783918618318,0.789209134313529,0.407412341537585,0,0.474540072496697,0,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr12:57636911..57636924,- | |||
}} |
Revision as of 22:58, 12 September 2013
Short description: | p@chr12:57636911..57636924, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:57636911..57636924, - |
Coexpression cluster: | MCL_coexpression_mm9:139 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 1.34e-54 | 17 |
thoracic segment organ | 1.34e-54 | 17 |
thoracic cavity | 1.34e-54 | 17 |
thoracic segment of trunk | 1.34e-54 | 17 |
respiratory primordium | 1.34e-54 | 17 |
endoderm of foregut | 1.34e-54 | 17 |
lung | 2.92e-51 | 14 |
respiratory tube | 2.92e-51 | 14 |
respiration organ | 2.92e-51 | 14 |
pair of lungs | 2.92e-51 | 14 |
lung primordium | 2.92e-51 | 14 |
lung bud | 2.92e-51 | 14 |
epithelial bud | 8.89e-42 | 17 |
epithelial fold | 3.91e-35 | 20 |
breast | 1.27e-22 | 6 |
chest | 1.27e-22 | 6 |
respiratory tract | 6.04e-21 | 41 |
respiratory system | 2.24e-20 | 42 |
tube | 2.13e-12 | 114 |
subdivision of trunk | 7.04e-12 | 66 |
anatomical conduit | 2.46e-11 | 122 |
trunk region element | 1.99e-09 | 79 |
foregut | 2.85e-09 | 80 |
endo-epithelium | 2.47e-08 | 69 |
trunk | 6.61e-08 | 90 |
organ system subdivision | 2.10e-07 | 194 |
basal ganglion | 2.95e-07 | 8 |
nuclear complex of neuraxis | 2.95e-07 | 8 |
aggregate regional part of brain | 2.95e-07 | 8 |
collection of basal ganglia | 2.95e-07 | 8 |
cerebral subcortex | 2.95e-07 | 8 |
corpus striatum | 8.53e-07 | 5 |
striatum | 8.53e-07 | 5 |
ventral part of telencephalon | 8.53e-07 | 5 |
future corpus striatum | 8.53e-07 | 5 |
epithelium | 8.90e-07 | 174 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.