FFCP PHASE1:Mm9::chr13:113228356..113228386,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=21|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:113228356..113228386,+|id=chr13:113228356..113228386,+|ontology_enrichment_celltype=CL:0002031!2.55e-22!25;CL:0000791!8.04e-22!9;CL:0000789!8.04e-22!9;CL:0002420!8.04e-22!9;CL:0002419!8.04e-22!9;CL:0000790!8.04e-22!9;CL:0000988!2.95e-21!32;CL:0002032!2.95e-21!32;CL:0000037!2.95e-21!32;CL:0000566!2.95e-21!32;CL:0000837!2.95e-21!32;CL:0000838!8.61e-20!12;CL:0000624!2.05e-19!8;CL:0000542!4.24e-18!13;CL:0000051!4.24e-18!13;CL:0000084!1.62e-17!11;CL:0000827!1.62e-17!11;CL:0002320!2.67e-15!46;CL:0000134!2.67e-15!46;CL:0000893!1.74e-14!6;CL:0002489!1.74e-14!6;CL:0000898!1.74e-14!6;CL:0000809!1.74e-14!6;CL:0000810!1.74e-14!6;CL:0000895!1.74e-14!6;CL:0000808!1.74e-14!6;CL:0000894!1.74e-14!6;CL:0000806!1.74e-14!6;CL:0000807!1.74e-14!6;CL:0000805!1.74e-14!6;CL:0002425!1.74e-14!6;CL:0002436!1.74e-14!6;CL:0002427!1.74e-14!6;CL:0002428!1.74e-14!6;CL:0002429!1.74e-14!6;CL:0002433!1.74e-14!6;CL:0002431!1.74e-14!6;CL:0002432!1.74e-14!6;CL:0000553!3.69e-14!6;CL:0000556!3.69e-14!6;CL:0000738!2.51e-13!17;CL:0002087!2.51e-13!17;CL:0000219!2.40e-12!54;CL:0000414!4.11e-10!11;CL:0000063!2.81e-09!66;CL:0000050!3.41e-09!9;CL:0002027!8.61e-08!3;CL:0002006!8.61e-08!3;CL:0002024!8.61e-08!3;CL:0000034!2.31e-07!97;CL:0000049!7.74e-07!19|ontology_enrichment_celltype_v019_2=CL:0000838,9.42e-33,12;CL:0000791,2.12e-32,9;CL:0000789,2.12e-32,9;CL:0002420,2.12e-32,9;CL:0002419,2.12e-32,9;CL:0000790,2.12e-32,9;CL:0000542,3.20e-30,13;CL:0000051,3.20e-30,13;CL:0000084,1.64e-26,11;CL:0000827,1.64e-26,11;CL:0000624,1.38e-25,8;CL:0000738,4.58e-23,17;CL:0002087,4.58e-23,17;CL:0002031,3.58e-20,25;CL:0000988,1.15e-15,32;CL:0002032,1.15e-15,32;CL:0000037,1.15e-15,32;CL:0000837,1.15e-15,32;CL:0002320,1.29e-13,46;CL:0000134,1.29e-13,46;CL:0000893,9.15e-13,6;CL:0002489,9.15e-13,6;CL:0000898,9.15e-13,6;CL:0000809,9.15e-13,6;CL:0000810,9.15e-13,6;CL:0000895,9.15e-13,6;CL:0000808,9.15e-13,6;CL:0000894,9.15e-13,6;CL:0000806,9.15e-13,6;CL:0000807,9.15e-13,6;CL:0000805,9.15e-13,6;CL:0002425,9.15e-13,6;CL:0002436,9.15e-13,6;CL:0002427,9.15e-13,6;CL:0002428,9.15e-13,6;CL:0002429,9.15e-13,6;CL:0002433,9.15e-13,6;CL:0002431,9.15e-13,6;CL:0002432,9.15e-13,6;CL:0000219,1.67e-11,54;CL:0000815,9.82e-10,1;CL:0000792,9.82e-10,1;CL:0000625,2.09e-09,1;CL:0000213,2.52e-09,1;CL:0002078,2.52e-09,1;CL:0000115,2.52e-09,1;CL:0002262,2.52e-09,1;CL:1000398,2.52e-09,1;CL:0000945,3.04e-09,1;CL:0000236,3.04e-09,1;CL:0000826,3.04e-09,1;CL:0000034,1.38e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.02e-22!48;UBERON:0002390!1.98e-22!45;UBERON:0003061!1.98e-22!45;UBERON:0002370!8.06e-20!23;UBERON:0000974!8.06e-20!23;UBERON:0004807!8.06e-20!23;UBERON:0005058!8.06e-20!23;UBERON:0003351!8.06e-20!23;UBERON:0009113!8.06e-20!23;UBERON:0003295!8.06e-20!23;UBERON:0009722!8.06e-20!23;UBERON:0005562!8.06e-20!23;UBERON:0007690!8.06e-20!23;UBERON:0004177!2.58e-19!29;UBERON:0006562!7.57e-19!24;UBERON:0003408!7.57e-19!24;UBERON:0001557!7.57e-19!24;UBERON:0001042!7.57e-19!24;UBERON:0008814!7.57e-19!24;UBERON:0009145!7.57e-19!24;UBERON:0002405!1.97e-18!70;UBERON:0000072!2.31e-16!27;UBERON:0002384!2.67e-15!46;UBERON:0005057!1.23e-13!51;UBERON:0003081!3.96e-12!88;UBERON:0000063!7.85e-12!35;UBERON:0000065!4.92e-11!41;UBERON:0001004!1.10e-10!42;UBERON:0003929!9.31e-10!55;UBERON:0002368!1.32e-08!60;UBERON:0005911!6.51e-08!69;UBERON:0002530!1.23e-07!65;UBERON:0000490!1.85e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.29e-13,46;UBERON:0002394,2.52e-09,1;UBERON:0001281,2.52e-09,1;UBERON:0000353,2.52e-09,1;UBERON:0003497,2.52e-09,1;UBERON:0003909,2.52e-09,1;UBERON:0003928,2.52e-09,1;UBERON:0003835,2.52e-09,1;UBERON:0003513,2.52e-09,1;UBERON:0001280,2.52e-09,1;UBERON:0004647,2.52e-09,1;UBERON:0002294,2.52e-09,1;UBERON:0001173,2.52e-09,1;UBERON:0004912,2.52e-09,1;UBERON:0005171,2.52e-09,1|phase1_expression=0,0,0,0,0,0,0,40.9320935309797,0.84473233291,1.17032263160997,0.34243593645101,0.159544317990673,32.6993394168603,22.2922026168443,0.666219523631325,0.404950534779652,0.699561878128147,1.10411757875383,0.685572168028694,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,30.4652099644765,19.1573465511204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0.679913719975421,1.81936888020755,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0,0.360586348559907,0.295379054349154,1.00966449948148,0.15241361331,0,0.194915761479505,0.962118416403295,0.935015217452552,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:113228356..113228386,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:113228356..113228386,+ | |||
|id=chr13:113228356..113228386,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.55e-22!25;CL:0000791!8.04e-22!9;CL:0000789!8.04e-22!9;CL:0002420!8.04e-22!9;CL:0002419!8.04e-22!9;CL:0000790!8.04e-22!9;CL:0000988!2.95e-21!32;CL:0002032!2.95e-21!32;CL:0000037!2.95e-21!32;CL:0000566!2.95e-21!32;CL:0000837!2.95e-21!32;CL:0000838!8.61e-20!12;CL:0000624!2.05e-19!8;CL:0000542!4.24e-18!13;CL:0000051!4.24e-18!13;CL:0000084!1.62e-17!11;CL:0000827!1.62e-17!11;CL:0002320!2.67e-15!46;CL:0000134!2.67e-15!46;CL:0000893!1.74e-14!6;CL:0002489!1.74e-14!6;CL:0000898!1.74e-14!6;CL:0000809!1.74e-14!6;CL:0000810!1.74e-14!6;CL:0000895!1.74e-14!6;CL:0000808!1.74e-14!6;CL:0000894!1.74e-14!6;CL:0000806!1.74e-14!6;CL:0000807!1.74e-14!6;CL:0000805!1.74e-14!6;CL:0002425!1.74e-14!6;CL:0002436!1.74e-14!6;CL:0002427!1.74e-14!6;CL:0002428!1.74e-14!6;CL:0002429!1.74e-14!6;CL:0002433!1.74e-14!6;CL:0002431!1.74e-14!6;CL:0002432!1.74e-14!6;CL:0000553!3.69e-14!6;CL:0000556!3.69e-14!6;CL:0000738!2.51e-13!17;CL:0002087!2.51e-13!17;CL:0000219!2.40e-12!54;CL:0000414!4.11e-10!11;CL:0000063!2.81e-09!66;CL:0000050!3.41e-09!9;CL:0002027!8.61e-08!3;CL:0002006!8.61e-08!3;CL:0002024!8.61e-08!3;CL:0000034!2.31e-07!97;CL:0000049!7.74e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.42e-33,12;CL:0000791,2.12e-32,9;CL:0000789,2.12e-32,9;CL:0002420,2.12e-32,9;CL:0002419,2.12e-32,9;CL:0000790,2.12e-32,9;CL:0000542,3.20e-30,13;CL:0000051,3.20e-30,13;CL:0000084,1.64e-26,11;CL:0000827,1.64e-26,11;CL:0000624,1.38e-25,8;CL:0000738,4.58e-23,17;CL:0002087,4.58e-23,17;CL:0002031,3.58e-20,25;CL:0000988,1.15e-15,32;CL:0002032,1.15e-15,32;CL:0000037,1.15e-15,32;CL:0000837,1.15e-15,32;CL:0002320,1.29e-13,46;CL:0000134,1.29e-13,46;CL:0000893,9.15e-13,6;CL:0002489,9.15e-13,6;CL:0000898,9.15e-13,6;CL:0000809,9.15e-13,6;CL:0000810,9.15e-13,6;CL:0000895,9.15e-13,6;CL:0000808,9.15e-13,6;CL:0000894,9.15e-13,6;CL:0000806,9.15e-13,6;CL:0000807,9.15e-13,6;CL:0000805,9.15e-13,6;CL:0002425,9.15e-13,6;CL:0002436,9.15e-13,6;CL:0002427,9.15e-13,6;CL:0002428,9.15e-13,6;CL:0002429,9.15e-13,6;CL:0002433,9.15e-13,6;CL:0002431,9.15e-13,6;CL:0002432,9.15e-13,6;CL:0000219,1.67e-11,54;CL:0000815,9.82e-10,1;CL:0000792,9.82e-10,1;CL:0000625,2.09e-09,1;CL:0000213,2.52e-09,1;CL:0002078,2.52e-09,1;CL:0000115,2.52e-09,1;CL:0002262,2.52e-09,1;CL:1000398,2.52e-09,1;CL:0000945,3.04e-09,1;CL:0000236,3.04e-09,1;CL:0000826,3.04e-09,1;CL:0000034,1.38e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.02e-22!48;UBERON:0002390!1.98e-22!45;UBERON:0003061!1.98e-22!45;UBERON:0002370!8.06e-20!23;UBERON:0000974!8.06e-20!23;UBERON:0004807!8.06e-20!23;UBERON:0005058!8.06e-20!23;UBERON:0003351!8.06e-20!23;UBERON:0009113!8.06e-20!23;UBERON:0003295!8.06e-20!23;UBERON:0009722!8.06e-20!23;UBERON:0005562!8.06e-20!23;UBERON:0007690!8.06e-20!23;UBERON:0004177!2.58e-19!29;UBERON:0006562!7.57e-19!24;UBERON:0003408!7.57e-19!24;UBERON:0001557!7.57e-19!24;UBERON:0001042!7.57e-19!24;UBERON:0008814!7.57e-19!24;UBERON:0009145!7.57e-19!24;UBERON:0002405!1.97e-18!70;UBERON:0000072!2.31e-16!27;UBERON:0002384!2.67e-15!46;UBERON:0005057!1.23e-13!51;UBERON:0003081!3.96e-12!88;UBERON:0000063!7.85e-12!35;UBERON:0000065!4.92e-11!41;UBERON:0001004!1.10e-10!42;UBERON:0003929!9.31e-10!55;UBERON:0002368!1.32e-08!60;UBERON:0005911!6.51e-08!69;UBERON:0002530!1.23e-07!65;UBERON:0000490!1.85e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.29e-13,46;UBERON:0002394,2.52e-09,1;UBERON:0001281,2.52e-09,1;UBERON:0000353,2.52e-09,1;UBERON:0003497,2.52e-09,1;UBERON:0003909,2.52e-09,1;UBERON:0003928,2.52e-09,1;UBERON:0003835,2.52e-09,1;UBERON:0003513,2.52e-09,1;UBERON:0001280,2.52e-09,1;UBERON:0004647,2.52e-09,1;UBERON:0002294,2.52e-09,1;UBERON:0001173,2.52e-09,1;UBERON:0004912,2.52e-09,1;UBERON:0005171,2.52e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,40.9320935309797,0.84473233291,1.17032263160997,0.34243593645101,0.159544317990673,32.6993394168603,22.2922026168443,0.666219523631325,0.404950534779652,0.699561878128147,1.10411757875383,0.685572168028694,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,30.4652099644765,19.1573465511204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0.679913719975421,1.81936888020755,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0,0.360586348559907,0.295379054349154,1.00966449948148,0.15241361331,0,0.194915761479505,0.962118416403295,0.935015217452552,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:113228356..113228386,+ | |||
}} |
Revision as of 23:54, 12 September 2013
Short description: | p@chr13:113228356..113228386, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:113228356..113228386, + |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.29e-13 | 46 |
bile duct | 2.52e-09 | 1 |
hepatic sinusoid | 2.52e-09 | 1 |
parenchyma | 2.52e-09 | 1 |
abdomen blood vessel | 2.52e-09 | 1 |
sinusoid | 2.52e-09 | 1 |
digestive system duct | 2.52e-09 | 1 |
abdominal segment blood vessel | 2.52e-09 | 1 |
trunk blood vessel | 2.52e-09 | 1 |
liver parenchyma | 2.52e-09 | 1 |
liver lobule | 2.52e-09 | 1 |
biliary system | 2.52e-09 | 1 |
biliary tree | 2.52e-09 | 1 |
biliary bud | 2.52e-09 | 1 |
hepatic duct | 2.52e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.