FFCP PHASE1:Mm9::chr13:56997135..56997154,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26946|HGNC=|MCL_coexpression_id=1119|UniProt=E9PVJ9,D6RI84|association_with_transcript=0bp_to_ENSMUST00000109871,ENSMUST00000151918_5end|description=CAGE_peak_1_at_Trpc7_5end|id=chr13:56997135..56997154,-|ontology_enrichment_celltype=CL:0000117!5.05e-19!23;CL:0000337!5.05e-19!23;CL:0000540!1.56e-11!33;CL:0000047!1.56e-11!33;CL:0000031!1.56e-11!33;CL:0000404!1.56e-11!33;CL:0000393!1.78e-08!39;CL:0000211!1.78e-08!39;CL:0000221!3.50e-07!44;CL:0000133!3.50e-07!44;CL:0002319!5.75e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.91e-24,23;CL:0000337,3.91e-24,23;CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0000393,1.23e-12,39;CL:0000211,1.23e-12,39;CL:0002319,4.14e-11,43;CL:0000221,9.02e-11,44;CL:0000133,9.02e-11,44;CL:0002608,3.24e-08,3;CL:0002613,3.82e-08,3;CL:0002612,4.75e-08,3;CL:0000120,6.58e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.14e-19!71;UBERON:0003075!4.14e-19!71;UBERON:0007284!4.14e-19!71;UBERON:0001049!5.24e-17!52;UBERON:0005068!5.24e-17!52;UBERON:0006241!5.24e-17!52;UBERON:0007135!5.24e-17!52;UBERON:0000033!1.00e-16!63;UBERON:0001017!5.94e-16!73;UBERON:0005743!5.94e-16!73;UBERON:0004121!1.36e-15!102;UBERON:0000924!1.36e-15!102;UBERON:0006601!1.36e-15!102;UBERON:0000955!1.45e-15!50;UBERON:0006238!1.45e-15!50;UBERON:0000073!4.29e-15!75;UBERON:0001016!4.29e-15!75;UBERON:0002616!9.01e-15!49;UBERON:0003056!2.44e-13!49;UBERON:0002020!1.57e-12!34;UBERON:0003080!5.43e-11!40;UBERON:0002780!2.60e-10!39;UBERON:0001890!2.60e-10!39;UBERON:0006240!2.60e-10!39;UBERON:0002791!5.46e-09!29;UBERON:0003528!5.46e-09!29;UBERON:0001893!5.46e-09!29;UBERON:0007811!5.62e-09!86;UBERON:0002420!1.13e-08!8;UBERON:0007245!1.13e-08!8;UBERON:0010009!1.13e-08!8;UBERON:0010011!1.13e-08!8;UBERON:0000454!1.13e-08!8;UBERON:0003076!2.96e-07!12;UBERON:0003057!2.96e-07!12;UBERON:0000153!4.15e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.03e-27,54;UBERON:0001049,1.31e-25,52;UBERON:0005068,1.31e-25,52;UBERON:0006241,1.31e-25,52;UBERON:0007135,1.31e-25,52;UBERON:0001017,1.70e-25,73;UBERON:0001016,1.25e-24,75;UBERON:0000955,8.58e-22,47;UBERON:0006238,8.58e-22,47;UBERON:0002346,1.83e-21,64;UBERON:0003075,1.83e-21,64;UBERON:0007284,1.83e-21,64;UBERON:0002616,3.42e-20,46;UBERON:0004121,1.85e-19,95;UBERON:0000924,1.85e-19,95;UBERON:0006601,1.85e-19,95;UBERON:0002020,2.62e-19,34;UBERON:0010371,4.87e-18,73;UBERON:0003080,1.70e-15,40;UBERON:0002420,9.52e-15,8;UBERON:0007245,9.52e-15,8;UBERON:0010009,9.52e-15,8;UBERON:0010011,9.52e-15,8;UBERON:0000454,9.52e-15,8;UBERON:0002780,3.89e-14,39;UBERON:0001890,3.89e-14,39;UBERON:0006240,3.89e-14,39;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0003056,2.08e-13,49;UBERON:0000369,4.68e-13,5;UBERON:0002435,4.68e-13,5;UBERON:0000204,4.68e-13,5;UBERON:0010082,4.68e-13,5;UBERON:0010314,5.15e-13,92;UBERON:0003076,1.76e-11,12;UBERON:0003057,1.76e-11,12;UBERON:0001954,1.19e-08,7;UBERON:0003022,1.19e-08,7;UBERON:0002421,1.19e-08,7;UBERON:0000349,1.19e-08,7;UBERON:0002600,1.19e-08,7;UBERON:0000025,2.21e-08,114;UBERON:0001948,3.79e-08,5;UBERON:0002315,3.79e-08,5;UBERON:0002257,4.75e-08,3;UBERON:0004111,1.90e-07,122;UBERON:0002240,8.86e-07,6;UBERON:0005174,8.86e-07,6;UBERON:0001137,8.86e-07,6|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.630974884054146,1.99955689082663,0.441737081903227,2.20483438586917,2.68367318851062,1.83843757322004,3.30347642998166,0.638436690425939,0.768032666281217,1.71452174049252,2.37867873366265,2.6045668527838,0.837548997004143,1.12552522006336,2.44477196442896,3.24091444021034,3.41692033917847,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.608930956624282,0.461230994512117,0.452167921657868,0,0,0,0,0,0,0,0,0,1.75668478206928,1.04723353406728,0.255457055208591,0,0,0,1.49790639404823,4.11750542536764,7.91622418311046,1.04294592115366,1.27857728665165,1.87009240103604,2.43361894601636,0,0,0,0.631325567659422,0,0,0.540186389416048,0.30140963567143,0.408218994907967,0.512454881139399,0.281105173679186,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,2.57261530948211,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0,0,0,0,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0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| ||
|EntrezGene=26946 | |||
|HGNC= | |||
|MCL_coexpression_id=1119 | |||
|UniProt=E9PVJ9,D6RI84 | |||
|association_with_transcript=0bp_to_ENSMUST00000109871,ENSMUST00000151918_5end | |||
|description=CAGE_peak_1_at_Trpc7_5end | |||
|id=chr13:56997135..56997154,- | |||
|ontology_enrichment_celltype=CL:0000117!5.05e-19!23;CL:0000337!5.05e-19!23;CL:0000540!1.56e-11!33;CL:0000047!1.56e-11!33;CL:0000031!1.56e-11!33;CL:0000404!1.56e-11!33;CL:0000393!1.78e-08!39;CL:0000211!1.78e-08!39;CL:0000221!3.50e-07!44;CL:0000133!3.50e-07!44;CL:0002319!5.75e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.91e-24,23;CL:0000337,3.91e-24,23;CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0000393,1.23e-12,39;CL:0000211,1.23e-12,39;CL:0002319,4.14e-11,43;CL:0000221,9.02e-11,44;CL:0000133,9.02e-11,44;CL:0002608,3.24e-08,3;CL:0002613,3.82e-08,3;CL:0002612,4.75e-08,3;CL:0000120,6.58e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.14e-19!71;UBERON:0003075!4.14e-19!71;UBERON:0007284!4.14e-19!71;UBERON:0001049!5.24e-17!52;UBERON:0005068!5.24e-17!52;UBERON:0006241!5.24e-17!52;UBERON:0007135!5.24e-17!52;UBERON:0000033!1.00e-16!63;UBERON:0001017!5.94e-16!73;UBERON:0005743!5.94e-16!73;UBERON:0004121!1.36e-15!102;UBERON:0000924!1.36e-15!102;UBERON:0006601!1.36e-15!102;UBERON:0000955!1.45e-15!50;UBERON:0006238!1.45e-15!50;UBERON:0000073!4.29e-15!75;UBERON:0001016!4.29e-15!75;UBERON:0002616!9.01e-15!49;UBERON:0003056!2.44e-13!49;UBERON:0002020!1.57e-12!34;UBERON:0003080!5.43e-11!40;UBERON:0002780!2.60e-10!39;UBERON:0001890!2.60e-10!39;UBERON:0006240!2.60e-10!39;UBERON:0002791!5.46e-09!29;UBERON:0003528!5.46e-09!29;UBERON:0001893!5.46e-09!29;UBERON:0007811!5.62e-09!86;UBERON:0002420!1.13e-08!8;UBERON:0007245!1.13e-08!8;UBERON:0010009!1.13e-08!8;UBERON:0010011!1.13e-08!8;UBERON:0000454!1.13e-08!8;UBERON:0003076!2.96e-07!12;UBERON:0003057!2.96e-07!12;UBERON:0000153!4.15e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.03e-27,54;UBERON:0001049,1.31e-25,52;UBERON:0005068,1.31e-25,52;UBERON:0006241,1.31e-25,52;UBERON:0007135,1.31e-25,52;UBERON:0001017,1.70e-25,73;UBERON:0001016,1.25e-24,75;UBERON:0000955,8.58e-22,47;UBERON:0006238,8.58e-22,47;UBERON:0002346,1.83e-21,64;UBERON:0003075,1.83e-21,64;UBERON:0007284,1.83e-21,64;UBERON:0002616,3.42e-20,46;UBERON:0004121,1.85e-19,95;UBERON:0000924,1.85e-19,95;UBERON:0006601,1.85e-19,95;UBERON:0002020,2.62e-19,34;UBERON:0010371,4.87e-18,73;UBERON:0003080,1.70e-15,40;UBERON:0002420,9.52e-15,8;UBERON:0007245,9.52e-15,8;UBERON:0010009,9.52e-15,8;UBERON:0010011,9.52e-15,8;UBERON:0000454,9.52e-15,8;UBERON:0002780,3.89e-14,39;UBERON:0001890,3.89e-14,39;UBERON:0006240,3.89e-14,39;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0003056,2.08e-13,49;UBERON:0000369,4.68e-13,5;UBERON:0002435,4.68e-13,5;UBERON:0000204,4.68e-13,5;UBERON:0010082,4.68e-13,5;UBERON:0010314,5.15e-13,92;UBERON:0003076,1.76e-11,12;UBERON:0003057,1.76e-11,12;UBERON:0001954,1.19e-08,7;UBERON:0003022,1.19e-08,7;UBERON:0002421,1.19e-08,7;UBERON:0000349,1.19e-08,7;UBERON:0002600,1.19e-08,7;UBERON:0000025,2.21e-08,114;UBERON:0001948,3.79e-08,5;UBERON:0002315,3.79e-08,5;UBERON:0002257,4.75e-08,3;UBERON:0004111,1.90e-07,122;UBERON:0002240,8.86e-07,6;UBERON:0005174,8.86e-07,6;UBERON:0001137,8.86e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.630974884054146,1.99955689082663,0.441737081903227,2.20483438586917,2.68367318851062,1.83843757322004,3.30347642998166,0.638436690425939,0.768032666281217,1.71452174049252,2.37867873366265,2.6045668527838,0.837548997004143,1.12552522006336,2.44477196442896,3.24091444021034,3.41692033917847,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.608930956624282,0.461230994512117,0.452167921657868,0,0,0,0,0,0,0,0,0,1.75668478206928,1.04723353406728,0.255457055208591,0,0,0,1.49790639404823,4.11750542536764,7.91622418311046,1.04294592115366,1.27857728665165,1.87009240103604,2.43361894601636,0,0,0,0.631325567659422,0,0,0.540186389416048,0.30140963567143,0.408218994907967,0.512454881139399,0.281105173679186,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,2.57261530948211,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0,0,0,0,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0.493647061806363,1.2178597964584,0,0,0,0,0,0,0,0,0.582961673259701,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37016503954128,0,0.675022500231806,0,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,1.60459604795908,1.51618327058278,0.760437899670719,0.188626341386076,0.561849044819294,0.640251524048693,0.804096565378586,0.952587382566147,0.231768651889711,0.192909220463705,1.23625770240992,1.03039244094078,1.02860775715625,0.70990322463735,0.715308569841963,0.290692833264657,0.564656282491984,0.507687647350059,0.365855945745545,1.31534855718921,0.543216455383447,0,0.593175090620871,0.197008964751127,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p1@Trpc7 | |||
}} |
Revision as of 00:53, 13 September 2013
Short description: | p1@Trpc7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trpc7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1119 |
Association with transcript: | 0bp_to_ENSMUST00000109871, ENSMUST00000151918_5end |
EntrezGene: | Trpc7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.91e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.91e-24 | 23 |
neuron | 1.23e-15 | 33 |
neuronal stem cell | 1.23e-15 | 33 |
neuroblast | 1.23e-15 | 33 |
electrically signaling cell | 1.23e-15 | 33 |
electrically responsive cell | 1.23e-12 | 39 |
electrically active cell | 1.23e-12 | 39 |
neural cell | 4.14e-11 | 43 |
ectodermal cell | 9.02e-11 | 44 |
neurectodermal cell | 9.02e-11 | 44 |
hippocampal neuron | 3.24e-08 | 3 |
striatum neuron | 3.82e-08 | 3 |
neuron of the ventral spinal cord | 4.75e-08 | 3 |
granule cell | 6.58e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.