FFCP PHASE1:Mm9::chr13:83860962..83860989,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=609|UniProt=|association_with_transcript=-170bp_to_ENSMUST00000131907_5end|description=CAGE_peak_1_at_ENSMUST00000131907_5end|id=chr13:83860962..83860989,+|ontology_enrichment_celltype=CL:0002319!5.49e-21!43;CL:0000221!4.08e-20!44;CL:0000133!4.08e-20!44;CL:0000540!2.37e-18!33;CL:0000047!2.37e-18!33;CL:0000031!2.37e-18!33;CL:0000404!2.37e-18!33;CL:0000055!2.34e-16!50;CL:0000117!3.94e-15!23;CL:0000337!3.94e-15!23;CL:0000393!3.90e-14!39;CL:0000211!3.90e-14!39;CL:0002321!2.04e-07!70;CL:0000220!2.04e-07!70;CL:0002609!9.39e-07!6|ontology_enrichment_celltype_v019_2=CL:0002319,7.30e-22,43;CL:0000221,4.75e-21,44;CL:0000133,4.75e-21,44;CL:0000540,1.54e-20,33;CL:0000047,1.54e-20,33;CL:0000031,1.54e-20,33;CL:0000404,1.54e-20,33;CL:0000117,1.26e-17,23;CL:0000337,1.26e-17,23;CL:0000393,1.27e-15,39;CL:0000211,1.27e-15,39;CL:0002321,1.52e-08,70;CL:0002609,1.03e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.54e-38!75;UBERON:0001016!6.54e-38!75;UBERON:0001017!1.35e-37!73;UBERON:0005743!1.35e-37!73;UBERON:0004121!2.99e-30!102;UBERON:0000924!2.99e-30!102;UBERON:0006601!2.99e-30!102;UBERON:0002346!2.08e-28!71;UBERON:0003075!2.08e-28!71;UBERON:0007284!2.08e-28!71;UBERON:0001049!4.57e-27!52;UBERON:0005068!4.57e-27!52;UBERON:0006241!4.57e-27!52;UBERON:0007135!4.57e-27!52;UBERON:0000033!2.41e-26!63;UBERON:0002020!1.34e-25!34;UBERON:0000955!9.81e-25!50;UBERON:0006238!9.81e-25!50;UBERON:0003056!1.39e-24!49;UBERON:0002616!7.91e-24!49;UBERON:0002791!3.80e-22!29;UBERON:0003528!3.80e-22!29;UBERON:0001893!3.80e-22!29;UBERON:0003080!1.09e-20!40;UBERON:0002780!3.37e-20!39;UBERON:0001890!3.37e-20!39;UBERON:0006240!3.37e-20!39;UBERON:0000956!9.83e-18!21;UBERON:0001869!9.83e-18!21;UBERON:0000203!9.83e-18!21;UBERON:0007811!2.23e-14!86;UBERON:0002619!2.92e-14!17;UBERON:0000153!6.72e-12!94;UBERON:0002021!3.91e-09!10;UBERON:0000411!3.91e-09!10;UBERON:0001950!3.91e-09!10;UBERON:0003076!7.10e-07!12;UBERON:0003057!7.10e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-38,73;UBERON:0001016,5.42e-37,75;UBERON:0004121,6.21e-34,95;UBERON:0000924,6.21e-34,95;UBERON:0006601,6.21e-34,95;UBERON:0002346,1.02e-33,64;UBERON:0003075,1.02e-33,64;UBERON:0007284,1.02e-33,64;UBERON:0002020,4.89e-30,34;UBERON:0000073,1.01e-27,54;UBERON:0001049,2.89e-27,52;UBERON:0005068,2.89e-27,52;UBERON:0006241,2.89e-27,52;UBERON:0007135,2.89e-27,52;UBERON:0010371,5.00e-27,73;UBERON:0003528,6.06e-26,29;UBERON:0002791,6.06e-26,29;UBERON:0001893,6.06e-26,29;UBERON:0000955,1.63e-23,47;UBERON:0006238,1.63e-23,47;UBERON:0003056,1.63e-23,49;UBERON:0002616,1.68e-22,46;UBERON:0000956,1.03e-20,21;UBERON:0001869,1.03e-20,21;UBERON:0000203,1.03e-20,21;UBERON:0003080,9.30e-20,40;UBERON:0002780,3.45e-19,39;UBERON:0001890,3.45e-19,39;UBERON:0006240,3.45e-19,39;UBERON:0010314,2.16e-17,92;UBERON:0002619,1.35e-16,17;UBERON:0002021,1.58e-10,10;UBERON:0000411,1.58e-10,10;UBERON:0001950,1.58e-10,10;UBERON:0003076,5.37e-08,12;UBERON:0003057,5.37e-08,12;UBERON:0001954,1.72e-07,7;UBERON:0003022,1.72e-07,7;UBERON:0002421,1.72e-07,7;UBERON:0000349,1.72e-07,7;UBERON:0002600,1.72e-07,7|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,11.9913836009246,11.643367684927,7.38833616482277,4.33957907038624,8.62515386189829,0,0,0,0,0,0,19.0177473208022,17.9856932952491,12.6766280701236,1.0165335962074,0.889294796111139,0,0,0,5.09320187881288,12.2949857702897,58.7920101789068,72.2281770074545,64.5697631348743,9.14083150092171,12.589506834242,42.2593257291591,51.3731724657747,37.6879702510109,3.30347642998166,5.10749352340751,6.29786786350598,12.6610836220986,13.9976094711687,15.6274011167028,6.70039197603314,3.37657566019008,8.09830713217094,25.0434297652618,18.5083185038834,22.3679334990361,0.681535739998656,0.377857800533928,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,37.475942017478,37.281513812795,0,0,0,0,7.33974133083631,15.0975198930147,40.5863557324552,23.6401075461496,24.0372529890511,9.55825004973976,15.2506787283692,0,0,0,1.47309299120532,0.130120442962704,2.98872735763515,3.06105620669094,14.7690721479001,20.138803748793,36.8967514420367,27.3609035714408,5.17406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,25.4450837762594,57.6265829323993,0,0,0.213288250535234,0,0.77320476793256,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.470996183524124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,5.27452589664914,0,0,9.78075480190396,11.3227235846025,13.1408272617007,2.62865677747807,5.79276552614225,4.24614796183249,6.07216052512342,6.72188473196017,3.55759000151871,50.1261253618019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.900305470156551,0.129358683782755,0.643011105094777,0,0.356737635204141,0.658196082408484,0,0.23467170806371,0,0,0,0,0,0,0,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.807424709485281,0.335769232728157,0,0,0,0,0,33.885110557024,31.7624413189952,36.092417346682,40.9010573977977,24.6629707117431,26.4387864086395,29.7009900101995,32.4231266321439,32.6262534468627,30.0300980816056,6.43481555021895,6.3843979744165,8.87814749921498,6.56388136084394,6.49800804146745,3.12533964365024,8.22312892865976,5.76898160268904,6.09746498224449,7.83361356467772,6.84394109703647,7.9223063382152,7.21039607518095,7.74704344098918,8.50044940543076,7.1444053692461,4.51948871184936,5.98018583437486,4.94503080963968,7.94874168725746,7.88599280486455,7.27650805253284,5.96090474868302,5.95920308192547,8.37573485696442,6.09225176820071,7.3171189149109,5.78753365163254,6.65440157844723,5.05028044491965,5.69448086996036,5.1222330835293,4.09231043169689,5.11291575913688,2.89359916471712,17.4867404556562,6.55008503647143,3.00819475667618,1.72159498861959,0.220591419119515,0|short_description=p1@ENSMUST00000131907}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=609 | |||
|UniProt= | |||
|association_with_transcript=-170bp_to_ENSMUST00000131907_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000131907_5end | |||
|id=chr13:83860962..83860989,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.49e-21!43;CL:0000221!4.08e-20!44;CL:0000133!4.08e-20!44;CL:0000540!2.37e-18!33;CL:0000047!2.37e-18!33;CL:0000031!2.37e-18!33;CL:0000404!2.37e-18!33;CL:0000055!2.34e-16!50;CL:0000117!3.94e-15!23;CL:0000337!3.94e-15!23;CL:0000393!3.90e-14!39;CL:0000211!3.90e-14!39;CL:0002321!2.04e-07!70;CL:0000220!2.04e-07!70;CL:0002609!9.39e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.30e-22,43;CL:0000221,4.75e-21,44;CL:0000133,4.75e-21,44;CL:0000540,1.54e-20,33;CL:0000047,1.54e-20,33;CL:0000031,1.54e-20,33;CL:0000404,1.54e-20,33;CL:0000117,1.26e-17,23;CL:0000337,1.26e-17,23;CL:0000393,1.27e-15,39;CL:0000211,1.27e-15,39;CL:0002321,1.52e-08,70;CL:0002609,1.03e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.54e-38!75;UBERON:0001016!6.54e-38!75;UBERON:0001017!1.35e-37!73;UBERON:0005743!1.35e-37!73;UBERON:0004121!2.99e-30!102;UBERON:0000924!2.99e-30!102;UBERON:0006601!2.99e-30!102;UBERON:0002346!2.08e-28!71;UBERON:0003075!2.08e-28!71;UBERON:0007284!2.08e-28!71;UBERON:0001049!4.57e-27!52;UBERON:0005068!4.57e-27!52;UBERON:0006241!4.57e-27!52;UBERON:0007135!4.57e-27!52;UBERON:0000033!2.41e-26!63;UBERON:0002020!1.34e-25!34;UBERON:0000955!9.81e-25!50;UBERON:0006238!9.81e-25!50;UBERON:0003056!1.39e-24!49;UBERON:0002616!7.91e-24!49;UBERON:0002791!3.80e-22!29;UBERON:0003528!3.80e-22!29;UBERON:0001893!3.80e-22!29;UBERON:0003080!1.09e-20!40;UBERON:0002780!3.37e-20!39;UBERON:0001890!3.37e-20!39;UBERON:0006240!3.37e-20!39;UBERON:0000956!9.83e-18!21;UBERON:0001869!9.83e-18!21;UBERON:0000203!9.83e-18!21;UBERON:0007811!2.23e-14!86;UBERON:0002619!2.92e-14!17;UBERON:0000153!6.72e-12!94;UBERON:0002021!3.91e-09!10;UBERON:0000411!3.91e-09!10;UBERON:0001950!3.91e-09!10;UBERON:0003076!7.10e-07!12;UBERON:0003057!7.10e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-38,73;UBERON:0001016,5.42e-37,75;UBERON:0004121,6.21e-34,95;UBERON:0000924,6.21e-34,95;UBERON:0006601,6.21e-34,95;UBERON:0002346,1.02e-33,64;UBERON:0003075,1.02e-33,64;UBERON:0007284,1.02e-33,64;UBERON:0002020,4.89e-30,34;UBERON:0000073,1.01e-27,54;UBERON:0001049,2.89e-27,52;UBERON:0005068,2.89e-27,52;UBERON:0006241,2.89e-27,52;UBERON:0007135,2.89e-27,52;UBERON:0010371,5.00e-27,73;UBERON:0003528,6.06e-26,29;UBERON:0002791,6.06e-26,29;UBERON:0001893,6.06e-26,29;UBERON:0000955,1.63e-23,47;UBERON:0006238,1.63e-23,47;UBERON:0003056,1.63e-23,49;UBERON:0002616,1.68e-22,46;UBERON:0000956,1.03e-20,21;UBERON:0001869,1.03e-20,21;UBERON:0000203,1.03e-20,21;UBERON:0003080,9.30e-20,40;UBERON:0002780,3.45e-19,39;UBERON:0001890,3.45e-19,39;UBERON:0006240,3.45e-19,39;UBERON:0010314,2.16e-17,92;UBERON:0002619,1.35e-16,17;UBERON:0002021,1.58e-10,10;UBERON:0000411,1.58e-10,10;UBERON:0001950,1.58e-10,10;UBERON:0003076,5.37e-08,12;UBERON:0003057,5.37e-08,12;UBERON:0001954,1.72e-07,7;UBERON:0003022,1.72e-07,7;UBERON:0002421,1.72e-07,7;UBERON:0000349,1.72e-07,7;UBERON:0002600,1.72e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,11.9913836009246,11.643367684927,7.38833616482277,4.33957907038624,8.62515386189829,0,0,0,0,0,0,19.0177473208022,17.9856932952491,12.6766280701236,1.0165335962074,0.889294796111139,0,0,0,5.09320187881288,12.2949857702897,58.7920101789068,72.2281770074545,64.5697631348743,9.14083150092171,12.589506834242,42.2593257291591,51.3731724657747,37.6879702510109,3.30347642998166,5.10749352340751,6.29786786350598,12.6610836220986,13.9976094711687,15.6274011167028,6.70039197603314,3.37657566019008,8.09830713217094,25.0434297652618,18.5083185038834,22.3679334990361,0.681535739998656,0.377857800533928,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,37.475942017478,37.281513812795,0,0,0,0,7.33974133083631,15.0975198930147,40.5863557324552,23.6401075461496,24.0372529890511,9.55825004973976,15.2506787283692,0,0,0,1.47309299120532,0.130120442962704,2.98872735763515,3.06105620669094,14.7690721479001,20.138803748793,36.8967514420367,27.3609035714408,5.17406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,25.4450837762594,57.6265829323993,0,0,0.213288250535234,0,0.77320476793256,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.470996183524124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,5.27452589664914,0,0,9.78075480190396,11.3227235846025,13.1408272617007,2.62865677747807,5.79276552614225,4.24614796183249,6.07216052512342,6.72188473196017,3.55759000151871,50.1261253618019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.900305470156551,0.129358683782755,0.643011105094777,0,0.356737635204141,0.658196082408484,0,0.23467170806371,0,0,0,0,0,0,0,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.807424709485281,0.335769232728157,0,0,0,0,0,33.885110557024,31.7624413189952,36.092417346682,40.9010573977977,24.6629707117431,26.4387864086395,29.7009900101995,32.4231266321439,32.6262534468627,30.0300980816056,6.43481555021895,6.3843979744165,8.87814749921498,6.56388136084394,6.49800804146745,3.12533964365024,8.22312892865976,5.76898160268904,6.09746498224449,7.83361356467772,6.84394109703647,7.9223063382152,7.21039607518095,7.74704344098918,8.50044940543076,7.1444053692461,4.51948871184936,5.98018583437486,4.94503080963968,7.94874168725746,7.88599280486455,7.27650805253284,5.96090474868302,5.95920308192547,8.37573485696442,6.09225176820071,7.3171189149109,5.78753365163254,6.65440157844723,5.05028044491965,5.69448086996036,5.1222330835293,4.09231043169689,5.11291575913688,2.89359916471712,17.4867404556562,6.55008503647143,3.00819475667618,1.72159498861959,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000131907 | |||
}} |
Revision as of 01:11, 13 September 2013
Short description: | p1@ENSMUST00000131907 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000131907_5end |
Coexpression cluster: | MCL_coexpression_mm9:609 |
Association with transcript: | -170bp_to_ENSMUST00000131907_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.30e-22 | 43 |
ectodermal cell | 4.75e-21 | 44 |
neurectodermal cell | 4.75e-21 | 44 |
neuron | 1.54e-20 | 33 |
neuronal stem cell | 1.54e-20 | 33 |
neuroblast | 1.54e-20 | 33 |
electrically signaling cell | 1.54e-20 | 33 |
CNS neuron (sensu Vertebrata) | 1.26e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-17 | 23 |
electrically responsive cell | 1.27e-15 | 39 |
electrically active cell | 1.27e-15 | 39 |
embryonic cell | 1.52e-08 | 70 |
neuron of cerebral cortex | 1.03e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.