FFCP PHASE1:Mm9::chr14:13178294..13178303,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54713|HGNC=|MCL_coexpression_id=76|UniProt=|association_with_transcript=54bp_to_uc007sft.2_5end|description=CAGE_peak_7_at_Fezf2_5end|id=chr14:13178294..13178303,-|ontology_enrichment_celltype=CL:0002609!6.58e-17!6;CL:0002608!5.44e-09!3|ontology_enrichment_celltype_v019_2=CL:0002609,2.53e-52,6;CL:0002608,1.93e-17,3;CL:0000117,5.21e-14,23;CL:0000337,5.21e-14,23;CL:0000540,7.33e-10,33;CL:0000047,7.33e-10,33;CL:0000031,7.33e-10,33;CL:0000404,7.33e-10,33;CL:0000393,2.20e-08,39;CL:0000211,2.20e-08,39;CL:0002319,1.26e-07,43;CL:0000221,1.86e-07,44;CL:0000133,1.86e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.26e-26!21;UBERON:0001869!1.26e-26!21;UBERON:0000203!1.26e-26!21;UBERON:0003056!2.10e-21!49;UBERON:0002791!6.15e-21!29;UBERON:0003528!6.15e-21!29;UBERON:0001893!6.15e-21!29;UBERON:0002780!1.37e-18!39;UBERON:0001890!1.37e-18!39;UBERON:0006240!1.37e-18!39;UBERON:0003080!5.11e-18!40;UBERON:0002619!2.32e-17!17;UBERON:0002020!2.73e-17!34;UBERON:0007811!2.69e-16!86;UBERON:0000153!9.43e-16!94;UBERON:0000033!1.67e-15!63;UBERON:0002616!6.40e-14!49;UBERON:0000955!1.48e-13!50;UBERON:0006238!1.48e-13!50;UBERON:0001954!2.08e-13!7;UBERON:0003022!2.08e-13!7;UBERON:0002421!2.08e-13!7;UBERON:0000349!2.08e-13!7;UBERON:0002600!2.08e-13!7;UBERON:0002346!3.52e-13!71;UBERON:0003075!3.52e-13!71;UBERON:0007284!3.52e-13!71;UBERON:0001049!7.15e-13!52;UBERON:0005068!7.15e-13!52;UBERON:0006241!7.15e-13!52;UBERON:0007135!7.15e-13!52;UBERON:0001017!5.68e-08!73;UBERON:0005743!5.68e-08!73;UBERON:0000073!1.19e-07!75;UBERON:0001016!1.19e-07!75;UBERON:0004121!1.19e-07!102;UBERON:0000924!1.19e-07!102;UBERON:0006601!1.19e-07!102;UBERON:0000064!4.09e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.30e-29,21;UBERON:0001869,3.30e-29,21;UBERON:0000203,3.30e-29,21;UBERON:0003528,2.99e-21,29;UBERON:0002791,2.99e-21,29;UBERON:0001893,2.99e-21,29;UBERON:0002020,3.59e-18,34;UBERON:0001954,1.76e-16,7;UBERON:0003022,1.76e-16,7;UBERON:0002421,1.76e-16,7;UBERON:0000349,1.76e-16,7;UBERON:0002600,1.76e-16,7;UBERON:0002780,7.07e-16,39;UBERON:0001890,7.07e-16,39;UBERON:0006240,7.07e-16,39;UBERON:0003080,1.74e-15,40;UBERON:0002616,1.70e-13,46;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0003056,1.11e-12,49;UBERON:0002619,4.53e-12,17;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0000073,1.59e-11,54;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0010314,8.41e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31806759387129,2.97013064329719,2.94454945891935,0,0,0.244981598429908,1.0543001812006,1.83843757322004,0,0,0,0,0.274462930807229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p7@Fezf2}} | ||
|EntrezGene=54713 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt= | |||
|association_with_transcript=54bp_to_uc007sft.2_5end | |||
|description=CAGE_peak_7_at_Fezf2_5end | |||
|id=chr14:13178294..13178303,- | |||
|ontology_enrichment_celltype=CL:0002609!6.58e-17!6;CL:0002608!5.44e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.53e-52,6;CL:0002608,1.93e-17,3;CL:0000117,5.21e-14,23;CL:0000337,5.21e-14,23;CL:0000540,7.33e-10,33;CL:0000047,7.33e-10,33;CL:0000031,7.33e-10,33;CL:0000404,7.33e-10,33;CL:0000393,2.20e-08,39;CL:0000211,2.20e-08,39;CL:0002319,1.26e-07,43;CL:0000221,1.86e-07,44;CL:0000133,1.86e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.26e-26!21;UBERON:0001869!1.26e-26!21;UBERON:0000203!1.26e-26!21;UBERON:0003056!2.10e-21!49;UBERON:0002791!6.15e-21!29;UBERON:0003528!6.15e-21!29;UBERON:0001893!6.15e-21!29;UBERON:0002780!1.37e-18!39;UBERON:0001890!1.37e-18!39;UBERON:0006240!1.37e-18!39;UBERON:0003080!5.11e-18!40;UBERON:0002619!2.32e-17!17;UBERON:0002020!2.73e-17!34;UBERON:0007811!2.69e-16!86;UBERON:0000153!9.43e-16!94;UBERON:0000033!1.67e-15!63;UBERON:0002616!6.40e-14!49;UBERON:0000955!1.48e-13!50;UBERON:0006238!1.48e-13!50;UBERON:0001954!2.08e-13!7;UBERON:0003022!2.08e-13!7;UBERON:0002421!2.08e-13!7;UBERON:0000349!2.08e-13!7;UBERON:0002600!2.08e-13!7;UBERON:0002346!3.52e-13!71;UBERON:0003075!3.52e-13!71;UBERON:0007284!3.52e-13!71;UBERON:0001049!7.15e-13!52;UBERON:0005068!7.15e-13!52;UBERON:0006241!7.15e-13!52;UBERON:0007135!7.15e-13!52;UBERON:0001017!5.68e-08!73;UBERON:0005743!5.68e-08!73;UBERON:0000073!1.19e-07!75;UBERON:0001016!1.19e-07!75;UBERON:0004121!1.19e-07!102;UBERON:0000924!1.19e-07!102;UBERON:0006601!1.19e-07!102;UBERON:0000064!4.09e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.30e-29,21;UBERON:0001869,3.30e-29,21;UBERON:0000203,3.30e-29,21;UBERON:0003528,2.99e-21,29;UBERON:0002791,2.99e-21,29;UBERON:0001893,2.99e-21,29;UBERON:0002020,3.59e-18,34;UBERON:0001954,1.76e-16,7;UBERON:0003022,1.76e-16,7;UBERON:0002421,1.76e-16,7;UBERON:0000349,1.76e-16,7;UBERON:0002600,1.76e-16,7;UBERON:0002780,7.07e-16,39;UBERON:0001890,7.07e-16,39;UBERON:0006240,7.07e-16,39;UBERON:0003080,1.74e-15,40;UBERON:0002616,1.70e-13,46;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0003056,1.11e-12,49;UBERON:0002619,4.53e-12,17;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0000073,1.59e-11,54;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31806759387129,2.97013064329719,2.94454945891935,0,0,0.244981598429908,1.0543001812006,1.83843757322004,0,0,0,0,0.274462930807229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p7@Fezf2 | |||
}} |
Revision as of 01:40, 13 September 2013
Short description: | p7@Fezf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fezf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 54bp_to_uc007sft.2_5end |
EntrezGene: | Fezf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.53e-52 | 6 |
hippocampal neuron | 1.93e-17 | 3 |
CNS neuron (sensu Vertebrata) | 5.21e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.21e-14 | 23 |
neuron | 7.33e-10 | 33 |
neuronal stem cell | 7.33e-10 | 33 |
neuroblast | 7.33e-10 | 33 |
electrically signaling cell | 7.33e-10 | 33 |
electrically responsive cell | 2.20e-08 | 39 |
electrically active cell | 2.20e-08 | 39 |
neural cell | 1.26e-07 | 43 |
ectodermal cell | 1.86e-07 | 44 |
neurectodermal cell | 1.86e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.30e-29 | 21 |
cerebral hemisphere | 3.30e-29 | 21 |
pallium | 3.30e-29 | 21 |
brain grey matter | 2.99e-21 | 29 |
regional part of telencephalon | 2.99e-21 | 29 |
telencephalon | 2.99e-21 | 29 |
gray matter | 3.59e-18 | 34 |
Ammon's horn | 1.76e-16 | 7 |
lobe parts of cerebral cortex | 1.76e-16 | 7 |
hippocampal formation | 1.76e-16 | 7 |
limbic system | 1.76e-16 | 7 |
limbic lobe | 1.76e-16 | 7 |
regional part of forebrain | 7.07e-16 | 39 |
forebrain | 7.07e-16 | 39 |
future forebrain | 7.07e-16 | 39 |
anterior neural tube | 1.74e-15 | 40 |
regional part of brain | 1.70e-13 | 46 |
brain | 3.25e-13 | 47 |
future brain | 3.25e-13 | 47 |
pre-chordal neural plate | 1.11e-12 | 49 |
regional part of cerebral cortex | 4.53e-12 | 17 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
regional part of nervous system | 1.59e-11 | 54 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.