FFCP PHASE1:Mm9::chr14:28047593..28047604,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=34|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:28047593..28047604,-|id=chr14:28047593..28047604,-|ontology_enrichment_celltype=CL:0000791!4.23e-34!9;CL:0000789!4.23e-34!9;CL:0002420!4.23e-34!9;CL:0002419!4.23e-34!9;CL:0000790!4.23e-34!9;CL:0000838!7.13e-31!12;CL:0000624!2.13e-30!8;CL:0000988!1.78e-28!32;CL:0002032!1.78e-28!32;CL:0000037!1.78e-28!32;CL:0000566!1.78e-28!32;CL:0000837!1.78e-28!32;CL:0000542!2.22e-28!13;CL:0000051!2.22e-28!13;CL:0000084!1.15e-27!11;CL:0000827!1.15e-27!11;CL:0000893!8.98e-23!6;CL:0002489!8.98e-23!6;CL:0000898!8.98e-23!6;CL:0000809!8.98e-23!6;CL:0000810!8.98e-23!6;CL:0000895!8.98e-23!6;CL:0000808!8.98e-23!6;CL:0000894!8.98e-23!6;CL:0000806!8.98e-23!6;CL:0000807!8.98e-23!6;CL:0000805!8.98e-23!6;CL:0002425!8.98e-23!6;CL:0002436!8.98e-23!6;CL:0002427!8.98e-23!6;CL:0002428!8.98e-23!6;CL:0002429!8.98e-23!6;CL:0002433!8.98e-23!6;CL:0002431!8.98e-23!6;CL:0002432!8.98e-23!6;CL:0000738!2.46e-21!17;CL:0002087!2.46e-21!17;CL:0002320!5.95e-19!46;CL:0000134!5.95e-19!46;CL:0000219!1.02e-15!54;CL:0002031!5.38e-14!25;CL:0000063!2.46e-12!66;CL:0000034!1.48e-11!97;CL:0000144!1.38e-08!121;CL:0000012!1.38e-08!121;CL:0000723!3.81e-08!91;CL:0000048!3.81e-08!91;CL:0000049!5.66e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,5.74e-20,32;CL:0002032,5.74e-20,32;CL:0000037,5.74e-20,32;CL:0000837,5.74e-20,32;CL:0000791,7.44e-19,9;CL:0000789,7.44e-19,9;CL:0002420,7.44e-19,9;CL:0002419,7.44e-19,9;CL:0000790,7.44e-19,9;CL:0000084,1.94e-15,11;CL:0000827,1.94e-15,11;CL:0000838,3.72e-14,12;CL:0000624,5.69e-14,8;CL:0002320,1.31e-13,46;CL:0000134,1.31e-13,46;CL:0000542,4.55e-13,13;CL:0000051,4.55e-13,13;CL:0000219,1.90e-11,54;CL:0000034,1.06e-10,97;CL:0000738,5.43e-10,17;CL:0002087,5.43e-10,17;CL:0000049,1.03e-08,19;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000625,6.57e-08,1;CL:0002031,8.99e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.95e-19!46;UBERON:0002370!2.33e-07!23;UBERON:0000974!2.33e-07!23;UBERON:0004807!2.33e-07!23;UBERON:0005058!2.33e-07!23;UBERON:0003351!2.33e-07!23;UBERON:0009113!2.33e-07!23;UBERON:0003295!2.33e-07!23;UBERON:0009722!2.33e-07!23;UBERON:0005562!2.33e-07!23;UBERON:0007690!2.33e-07!23;UBERON:0006562!5.11e-07!24;UBERON:0003408!5.11e-07!24;UBERON:0001557!5.11e-07!24;UBERON:0001042!5.11e-07!24;UBERON:0008814!5.11e-07!24;UBERON:0009145!5.11e-07!24;UBERON:0002390!7.00e-07!45;UBERON:0003061!7.00e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.31e-13,46|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,3.66050677594334,2.10658073689794,0.513653904676515,0.319088635981346,0.684802919724823,0.611942816932982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07371423320129,1.79970819298022,2.03312363316904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754420319023592,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.728511669576,11.056164733569,7.87739850685216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:28047593..28047604,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:28047593..28047604,- | |||
|id=chr14:28047593..28047604,- | |||
|ontology_enrichment_celltype=CL:0000791!4.23e-34!9;CL:0000789!4.23e-34!9;CL:0002420!4.23e-34!9;CL:0002419!4.23e-34!9;CL:0000790!4.23e-34!9;CL:0000838!7.13e-31!12;CL:0000624!2.13e-30!8;CL:0000988!1.78e-28!32;CL:0002032!1.78e-28!32;CL:0000037!1.78e-28!32;CL:0000566!1.78e-28!32;CL:0000837!1.78e-28!32;CL:0000542!2.22e-28!13;CL:0000051!2.22e-28!13;CL:0000084!1.15e-27!11;CL:0000827!1.15e-27!11;CL:0000893!8.98e-23!6;CL:0002489!8.98e-23!6;CL:0000898!8.98e-23!6;CL:0000809!8.98e-23!6;CL:0000810!8.98e-23!6;CL:0000895!8.98e-23!6;CL:0000808!8.98e-23!6;CL:0000894!8.98e-23!6;CL:0000806!8.98e-23!6;CL:0000807!8.98e-23!6;CL:0000805!8.98e-23!6;CL:0002425!8.98e-23!6;CL:0002436!8.98e-23!6;CL:0002427!8.98e-23!6;CL:0002428!8.98e-23!6;CL:0002429!8.98e-23!6;CL:0002433!8.98e-23!6;CL:0002431!8.98e-23!6;CL:0002432!8.98e-23!6;CL:0000738!2.46e-21!17;CL:0002087!2.46e-21!17;CL:0002320!5.95e-19!46;CL:0000134!5.95e-19!46;CL:0000219!1.02e-15!54;CL:0002031!5.38e-14!25;CL:0000063!2.46e-12!66;CL:0000034!1.48e-11!97;CL:0000144!1.38e-08!121;CL:0000012!1.38e-08!121;CL:0000723!3.81e-08!91;CL:0000048!3.81e-08!91;CL:0000049!5.66e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.74e-20,32;CL:0002032,5.74e-20,32;CL:0000037,5.74e-20,32;CL:0000837,5.74e-20,32;CL:0000791,7.44e-19,9;CL:0000789,7.44e-19,9;CL:0002420,7.44e-19,9;CL:0002419,7.44e-19,9;CL:0000790,7.44e-19,9;CL:0000084,1.94e-15,11;CL:0000827,1.94e-15,11;CL:0000838,3.72e-14,12;CL:0000624,5.69e-14,8;CL:0002320,1.31e-13,46;CL:0000134,1.31e-13,46;CL:0000542,4.55e-13,13;CL:0000051,4.55e-13,13;CL:0000219,1.90e-11,54;CL:0000034,1.06e-10,97;CL:0000738,5.43e-10,17;CL:0002087,5.43e-10,17;CL:0000049,1.03e-08,19;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000625,6.57e-08,1;CL:0002031,8.99e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.95e-19!46;UBERON:0002370!2.33e-07!23;UBERON:0000974!2.33e-07!23;UBERON:0004807!2.33e-07!23;UBERON:0005058!2.33e-07!23;UBERON:0003351!2.33e-07!23;UBERON:0009113!2.33e-07!23;UBERON:0003295!2.33e-07!23;UBERON:0009722!2.33e-07!23;UBERON:0005562!2.33e-07!23;UBERON:0007690!2.33e-07!23;UBERON:0006562!5.11e-07!24;UBERON:0003408!5.11e-07!24;UBERON:0001557!5.11e-07!24;UBERON:0001042!5.11e-07!24;UBERON:0008814!5.11e-07!24;UBERON:0009145!5.11e-07!24;UBERON:0002390!7.00e-07!45;UBERON:0003061!7.00e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.31e-13,46 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,3.66050677594334,2.10658073689794,0.513653904676515,0.319088635981346,0.684802919724823,0.611942816932982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07371423320129,1.79970819298022,2.03312363316904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754420319023592,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.728511669576,11.056164733569,7.87739850685216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:28047593..28047604,- | |||
}} |
Revision as of 01:52, 13 September 2013
Short description: | p@chr14:28047593..28047604, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:28047593..28047604, - |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.74e-20 | 32 |
hematopoietic oligopotent progenitor cell | 5.74e-20 | 32 |
hematopoietic stem cell | 5.74e-20 | 32 |
hematopoietic multipotent progenitor cell | 5.74e-20 | 32 |
mature alpha-beta T cell | 7.44e-19 | 9 |
alpha-beta T cell | 7.44e-19 | 9 |
immature T cell | 7.44e-19 | 9 |
mature T cell | 7.44e-19 | 9 |
immature alpha-beta T cell | 7.44e-19 | 9 |
T cell | 1.94e-15 | 11 |
pro-T cell | 1.94e-15 | 11 |
lymphoid lineage restricted progenitor cell | 3.72e-14 | 12 |
CD4-positive, alpha-beta T cell | 5.69e-14 | 8 |
connective tissue cell | 1.31e-13 | 46 |
mesenchymal cell | 1.31e-13 | 46 |
lymphocyte | 4.55e-13 | 13 |
common lymphoid progenitor | 4.55e-13 | 13 |
motile cell | 1.90e-11 | 54 |
stem cell | 1.06e-10 | 97 |
leukocyte | 5.43e-10 | 17 |
nongranular leukocyte | 5.43e-10 | 17 |
common myeloid progenitor | 1.03e-08 | 19 |
regulatory T cell | 4.10e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.10e-08 | 1 |
CD8-positive, alpha-beta T cell | 6.57e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 8.99e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.31e-13 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.