FFCP PHASE1:Hg19::chr4:186733311..186733322,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24098|TSSclassifier=S|UniProt=|association_with_transcript=40bp_to_ENST00000393523_5end|coexpression_cluster_id=C56|description=CAGE_peak_16_at_SORBS2_5end|id=chr4:186733311..186733322,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002586;7.66e-09;3|ontology_enrichment_celltype_v019_2=CL:0002586,4.88e-09,3;CL:0000149,7.39e-07,4|ontology_enrichment_development_v019=UBERON:0006601;1.64e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.76e-07;2|ontology_enrichment_disease_v019_2=DOID:114,3.77e-07,2|ontology_enrichment_uberon=UBERON:0007023!6.05e-44!115;UBERON:0005743!5.31e-35!86;UBERON:0002780!1.73e-33!41;UBERON:0001890!1.73e-33!41;UBERON:0006240!1.73e-33!41;UBERON:0003080!2.25e-32!42;UBERON:0000073!3.25e-32!94;UBERON:0001016!3.25e-32!94;UBERON:0001017!6.45e-31!82;UBERON:0003056!3.04e-30!61;UBERON:0001049!4.82e-30!57;UBERON:0005068!4.82e-30!57;UBERON:0006241!4.82e-30!57;UBERON:0007135!4.82e-30!57;UBERON:0003075!1.06e-29!86;UBERON:0007284!1.06e-29!86;UBERON:0000955!8.33e-28!69;UBERON:0006238!8.33e-28!69;UBERON:0002346!1.61e-27!90;UBERON:0001869!6.70e-27!32;UBERON:0002616!7.37e-27!59;UBERON:0001893!2.13e-26!34;UBERON:0002791!2.89e-25!33;UBERON:0002020!2.72e-24!34;UBERON:0003528!2.72e-24!34;UBERON:0000153!5.60e-24!129;UBERON:0007811!5.60e-24!129;UBERON:0000033!5.76e-23!123;UBERON:0000956!2.69e-21!25;UBERON:0000203!2.69e-21!25;UBERON:0002619!3.79e-21!22;UBERON:0004121!8.77e-20!169;UBERON:0001950!4.77e-19!20;UBERON:0000924!8.53e-19!173;UBERON:0006601!8.53e-19!173;UBERON:0000481!2.01e-12!347;UBERON:0000025!4.65e-11!194;UBERON:0000062!2.69e-10!511;UBERON:0000477!3.30e-10!286;UBERON:0004111!3.65e-10!241;UBERON:0000119!2.30e-09!312;UBERON:0000483!2.53e-09!309;UBERON:0001894!1.35e-08!7;UBERON:0006222!1.35e-08!7;UBERON:0000475!1.93e-08!365;UBERON:0000064!2.27e-08!219;UBERON:0001871!6.68e-08!7;UBERON:0000200!7.93e-08!6;UBERON:0000922!2.60e-07!612;UBERON:0000349!2.69e-07!5;UBERON:0002420!4.33e-07!9;UBERON:0007245!4.33e-07!9;UBERON:0010009!4.33e-07!9;UBERON:0010011!4.33e-07!9;UBERON:0000454!4.33e-07!9;UBERON:0001872!5.82e-07!5;UBERON:0000468!7.24e-07!659|ontology_enrichment_uberon_v019=UBERON:0001869;6.44e-36;32!UBERON:0001893;1.30e-33;34!UBERON:0002791;4.56e-33;32!UBERON:0002619;2.11e-32;22!UBERON:0002780;3.03e-32;41!UBERON:0001890;3.03e-32;41!UBERON:0003528;6.87e-30;34!UBERON:0002020;6.87e-30;34!UBERON:0001950;2.53e-28;20!UBERON:0000956;4.31e-28;25!UBERON:0000203;4.31e-28;25!UBERON:0000073;3.24e-20;53!UBERON:0002616;3.24e-20;53!UBERON:0001017;3.85e-19;75!UBERON:0000955;1.85e-17;68!UBERON:0002420;4.95e-14;9!UBERON:0007245;4.95e-14;9!UBERON:0010009;4.95e-14;9!UBERON:0010011;4.95e-14;9!UBERON:0000454;4.95e-14;9!UBERON:0001016;1.81e-13;83!UBERON:0000349;2.86e-13;5!UBERON:0001872;3.96e-13;5!UBERON:0000369;1.50e-11;4!UBERON:0002435;1.50e-11;4!UBERON:0000204;1.50e-11;4!UBERON:0003296;4.35e-11;4!UBERON:0010133;4.35e-11;4!UBERON:0007023;3.01e-10;114!UBERON:0001871;1.20e-09;6!UBERON:0009663;1.25e-09;7!UBERON:0001894;1.65e-09;7!UBERON:0000966;3.87e-09;5!UBERON:0005388;3.87e-09;5!UBERON:0001802;3.87e-09;5!UBERON:0005383;6.70e-09;3!UBERON:0005382;6.70e-09;3!UBERON:0001781;7.66e-09;3!UBERON:0001782;7.66e-09;3!UBERON:0007100;6.17e-08;25!UBERON:0000125;2.15e-07;9!UBERON:0002308;2.15e-07;9!UBERON:0000200;2.41e-07;6!UBERON:0010314;3.52e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0002780,8.11e-46,41;UBERON:0001890,8.11e-46,41;UBERON:0003080,8.11e-46,41;UBERON:0006240,8.11e-46,41;UBERON:0003056,7.91e-44,61;UBERON:0001869,1.75e-40,32;UBERON:0003075,4.22e-39,82;UBERON:0007284,4.22e-39,82;UBERON:0001893,9.03e-38,34;UBERON:0000955,2.39e-37,68;UBERON:0006238,2.39e-37,68;UBERON:0002791,7.51e-37,32;UBERON:0002346,8.49e-37,86;UBERON:0001049,1.54e-36,56;UBERON:0005068,1.54e-36,56;UBERON:0006241,1.54e-36,56;UBERON:0007135,1.54e-36,56;UBERON:0007023,2.22e-36,114;UBERON:0000073,2.77e-36,53;UBERON:0002616,2.77e-36,53;UBERON:0003528,2.29e-34,34;UBERON:0002020,2.29e-34,34;UBERON:0001017,5.92e-34,81;UBERON:0002619,5.79e-33,22;UBERON:0001016,2.04e-31,89;UBERON:0001950,1.08e-28,20;UBERON:0010371,1.27e-28,104;UBERON:0000956,1.39e-28,25;UBERON:0000203,1.39e-28,25;UBERON:0010314,5.01e-28,132;UBERON:0004121,8.71e-22,171;UBERON:0000924,8.71e-22,171;UBERON:0006601,8.71e-22,171;UBERON:0002420,3.14e-14,9;UBERON:0007245,3.14e-14,9;UBERON:0010009,3.14e-14,9;UBERON:0010011,3.14e-14,9;UBERON:0000454,3.14e-14,9;UBERON:0000349,1.09e-13,5;UBERON:0011216,2.07e-13,223;UBERON:0000025,2.23e-13,192;UBERON:0001872,5.53e-13,5;UBERON:0000369,1.02e-11,4;UBERON:0002435,1.02e-11,4;UBERON:0000204,1.02e-11,4;UBERON:0010082,1.02e-11,4;UBERON:0003296,7.51e-11,4;UBERON:0010133,7.51e-11,4;UBERON:0004111,9.37e-11,240;UBERON:0000483,7.60e-10,306;UBERON:0001871,8.80e-10,6;UBERON:0009663,1.10e-09,7;UBERON:0000119,1.24e-09,309;UBERON:0001894,2.60e-09,7;UBERON:0006222,2.60e-09,7;UBERON:0005383,4.62e-09,3;UBERON:0005382,4.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2827210363,0.488965776731466,0,0,0,0|short_description=p16@SORBS2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENST00000393523_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_16_at_SORBS2_5end | |||
|id=chr4:186733311..186733322,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;7.66e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.88e-09,3;CL:0000149,7.39e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.77e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-44!115;UBERON:0005743!5.31e-35!86;UBERON:0002780!1.73e-33!41;UBERON:0001890!1.73e-33!41;UBERON:0006240!1.73e-33!41;UBERON:0003080!2.25e-32!42;UBERON:0000073!3.25e-32!94;UBERON:0001016!3.25e-32!94;UBERON:0001017!6.45e-31!82;UBERON:0003056!3.04e-30!61;UBERON:0001049!4.82e-30!57;UBERON:0005068!4.82e-30!57;UBERON:0006241!4.82e-30!57;UBERON:0007135!4.82e-30!57;UBERON:0003075!1.06e-29!86;UBERON:0007284!1.06e-29!86;UBERON:0000955!8.33e-28!69;UBERON:0006238!8.33e-28!69;UBERON:0002346!1.61e-27!90;UBERON:0001869!6.70e-27!32;UBERON:0002616!7.37e-27!59;UBERON:0001893!2.13e-26!34;UBERON:0002791!2.89e-25!33;UBERON:0002020!2.72e-24!34;UBERON:0003528!2.72e-24!34;UBERON:0000153!5.60e-24!129;UBERON:0007811!5.60e-24!129;UBERON:0000033!5.76e-23!123;UBERON:0000956!2.69e-21!25;UBERON:0000203!2.69e-21!25;UBERON:0002619!3.79e-21!22;UBERON:0004121!8.77e-20!169;UBERON:0001950!4.77e-19!20;UBERON:0000924!8.53e-19!173;UBERON:0006601!8.53e-19!173;UBERON:0000481!2.01e-12!347;UBERON:0000025!4.65e-11!194;UBERON:0000062!2.69e-10!511;UBERON:0000477!3.30e-10!286;UBERON:0004111!3.65e-10!241;UBERON:0000119!2.30e-09!312;UBERON:0000483!2.53e-09!309;UBERON:0001894!1.35e-08!7;UBERON:0006222!1.35e-08!7;UBERON:0000475!1.93e-08!365;UBERON:0000064!2.27e-08!219;UBERON:0001871!6.68e-08!7;UBERON:0000200!7.93e-08!6;UBERON:0000922!2.60e-07!612;UBERON:0000349!2.69e-07!5;UBERON:0002420!4.33e-07!9;UBERON:0007245!4.33e-07!9;UBERON:0010009!4.33e-07!9;UBERON:0010011!4.33e-07!9;UBERON:0000454!4.33e-07!9;UBERON:0001872!5.82e-07!5;UBERON:0000468!7.24e-07!659 | |||
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|short_description=p16@SORBS2 | |||
}} |
Revision as of 10:21, 13 September 2013
Short description: | p16@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_SORBS2_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 40bp_to_ENST00000393523_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.88e-09 | 3 |
visual pigment cell | 7.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.77e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.