FFCP PHASE1:Mm9::chr15:5066634..5066678,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100502825,67281|HGNC=|MCL_coexpression_id=81|UniProt=Q9D823|association_with_transcript=21bp_to_ENSMUST00000045356,NM_026069,uc007vcs.2_5end|description=CAGE_peak_1_at_Gm13826_5end,CAGE_peak_1_at_Rpl37_5end|id=chr15:5066634..5066678,+|ontology_enrichment_celltype=CL:0000063!1.47e-20!66;CL:0000144!4.42e-20!121;CL:0000012!4.42e-20!121;CL:0002371!1.37e-18!118;CL:0000548!2.85e-17!115;CL:0000004!2.85e-17!115;CL:0000255!2.85e-17!115;CL:0000034!2.03e-16!97;CL:0000988!1.92e-15!32;CL:0002032!1.92e-15!32;CL:0000037!1.92e-15!32;CL:0000566!1.92e-15!32;CL:0000837!1.92e-15!32;CL:0000723!1.10e-13!91;CL:0000048!1.10e-13!91;CL:0002320!1.66e-12!46;CL:0000134!1.66e-12!46;CL:0002031!1.71e-12!25;CL:0000219!3.63e-09!54;CL:0000838!1.34e-08!12;CL:0000049!2.28e-08!19;CL:0000542!2.40e-08!13;CL:0000051!2.40e-08!13;CL:0000738!4.24e-08!17;CL:0002087!4.24e-08!17;CL:0000084!6.70e-08!11;CL:0000827!6.70e-08!11;CL:0000791!4.38e-07!9;CL:0000789!4.38e-07!9;CL:0002420!4.38e-07!9;CL:0002419!4.38e-07!9;CL:0000790!4.38e-07!9;CL:0000763!8.63e-07!16;CL:0000066!9.43e-07!25|ontology_enrichment_celltype_v019_2=CL:0000034,2.04e-16,97;CL:0000988,1.92e-15,32;CL:0002032,1.92e-15,32;CL:0000037,1.92e-15,32;CL:0000837,1.92e-15,32;CL:0000723,1.11e-13,91;CL:0000048,1.11e-13,91;CL:0002320,1.66e-12,46;CL:0000134,1.66e-12,46;CL:0002031,1.71e-12,25;CL:0000219,3.63e-09,54;CL:0000838,1.34e-08,12;CL:0000049,2.28e-08,19;CL:0000542,2.40e-08,13;CL:0000051,2.40e-08,13;CL:0000738,4.24e-08,17;CL:0002087,4.24e-08,17;CL:0000084,6.70e-08,11;CL:0000827,6.70e-08,11;CL:0000791,4.38e-07,9;CL:0000789,4.38e-07,9;CL:0002420,4.38e-07,9;CL:0002419,4.38e-07,9;CL:0000790,4.38e-07,9;CL:0000763,8.63e-07,16;CL:0000066,9.43e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.66e-12!46;UBERON:0002193!3.46e-08!48;UBERON:0002390!7.39e-08!45;UBERON:0003061!7.39e-08!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-12,46;UBERON:0002193,3.46e-08,48;UBERON:0002405,3.46e-08,48;UBERON:0002390,7.39e-08,45;UBERON:0003061,7.39e-08,45|phase1_expression=20.979498970728,5.23463111459042,12.2849794635175,12.0985684522732,16.5295590882295,16.9558064631009,41.8166626665991,53.7153025516957,117.41779427449,93.3917460024754,98.2791137614399,70.8376771878587,82.6899525567724,65.3904610094101,7.66152452176024,55.883173799592,72.0548734471991,83.1242805718956,77.0583116864252,89.9706061811824,4.42225108785563,10.2269679736912,100.56191881849,41.7580223490791,50.0112232726431,14.9300310669905,16.3689558540448,13.1437451938392,33.8241686632346,16.1299283046356,20.1774764696327,37.4668097341182,20.2971379902908,63.3926724061755,26.285497397366,41.2261920489061,31.2379115081425,18.8339233831608,21.8773896466664,20.4174260149781,14.1175557127443,18.442228093878,25.7320487106511,11.9601977076798,9.7321853970734,11.0128051297009,2.34717403304412,5.45062890951116,4.61340983742391,3.4997381833371,5.45947044338914,2.87505128729943,123.487998058494,100.099975597566,106.877828127304,6.43148590089868,6.01720223871389,4.64104883049698,10.9250888864183,11.6378015439847,6.33831403506179,5.76035704517525,1.77858959222228,5.39939830368839,8.89979726310277,10.6572017241915,5.09320187881288,7.30014780110954,7.77672092313582,8.23536223823313,9.04397333810943,12.5686433137674,9.718215801871,9.92175473641128,7.85932862349538,0.919218786610021,4.40463523997555,5.87361755191863,6.14426133024974,9.10015385338338,7.77644970620482,9.37644067002168,10.3297709630511,3.93933827022176,8.86229837105499,7.66034322231536,8.82704420954438,9.69277118291563,36.3485727999283,25.2409010756664,44.6391312600584,40.4399222181252,11.5595126730318,6.47643829965381,3.24888208723835,2.68816132258401,1.96622188184453,5.45377032249785,113.006912002248,113.77534299233,26.3377194982393,51.3305909657271,10.1922095882658,21.3320010945999,85.7304522404408,90.7028318400853,104.138035673045,3.65388415100992,4.91981978929626,6.67989625791711,7.63335437770998,7.91610243611567,5.30415643688935,7.08396410597326,5.64425794251383,6.03199638382442,3.21353458054686,3.7595832799177,5.30766331169925,6.14714029800155,4.85851340612866,5.81850303762267,0,5.85561594023094,7.74952815209784,5.62005521458901,43.7325204446609,79.7870632221232,44.6016497026457,6.14141621559773,3.20250421973039,10.6806199295935,8.51739168942155,9.46147192122223,4.57133698031032,6.65189178577806,4.48093200941392,6.71797641294502,5.81262344397452,4.8401626853889,6.8963834770233,6.43725892413724,3.78130472591233,7.68594570962147,10.8178033650611,7.81493693737584,7.12133106653939,11.6416516832557,6.03590380211958,7.94245536704841,7.5658983390498,6.1374805079721,7.22922847986555,7.66154766348766,5.55611768301447,9.35461054046918,35.812872552975,51.469581422943,15.6289924667576,6.21377317606506,7.97388603935727,7.38254451990161,5.44512891845984,7.47704080640135,7.25055430570678,5.58081467400979,8.58474884478781,5.3712057488898,4.77223564749093,6.895033491322,3.64809642956351,4.67839959761063,4.17145219052996,3.75777972529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| ||
|EntrezGene=100502825,67281 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|UniProt=Q9D823 | |||
|association_with_transcript=21bp_to_ENSMUST00000045356,NM_026069,uc007vcs.2_5end | |||
|description=CAGE_peak_1_at_Gm13826_5end,CAGE_peak_1_at_Rpl37_5end | |||
|id=chr15:5066634..5066678,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.47e-20!66;CL:0000144!4.42e-20!121;CL:0000012!4.42e-20!121;CL:0002371!1.37e-18!118;CL:0000548!2.85e-17!115;CL:0000004!2.85e-17!115;CL:0000255!2.85e-17!115;CL:0000034!2.03e-16!97;CL:0000988!1.92e-15!32;CL:0002032!1.92e-15!32;CL:0000037!1.92e-15!32;CL:0000566!1.92e-15!32;CL:0000837!1.92e-15!32;CL:0000723!1.10e-13!91;CL:0000048!1.10e-13!91;CL:0002320!1.66e-12!46;CL:0000134!1.66e-12!46;CL:0002031!1.71e-12!25;CL:0000219!3.63e-09!54;CL:0000838!1.34e-08!12;CL:0000049!2.28e-08!19;CL:0000542!2.40e-08!13;CL:0000051!2.40e-08!13;CL:0000738!4.24e-08!17;CL:0002087!4.24e-08!17;CL:0000084!6.70e-08!11;CL:0000827!6.70e-08!11;CL:0000791!4.38e-07!9;CL:0000789!4.38e-07!9;CL:0002420!4.38e-07!9;CL:0002419!4.38e-07!9;CL:0000790!4.38e-07!9;CL:0000763!8.63e-07!16;CL:0000066!9.43e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.04e-16,97;CL:0000988,1.92e-15,32;CL:0002032,1.92e-15,32;CL:0000037,1.92e-15,32;CL:0000837,1.92e-15,32;CL:0000723,1.11e-13,91;CL:0000048,1.11e-13,91;CL:0002320,1.66e-12,46;CL:0000134,1.66e-12,46;CL:0002031,1.71e-12,25;CL:0000219,3.63e-09,54;CL:0000838,1.34e-08,12;CL:0000049,2.28e-08,19;CL:0000542,2.40e-08,13;CL:0000051,2.40e-08,13;CL:0000738,4.24e-08,17;CL:0002087,4.24e-08,17;CL:0000084,6.70e-08,11;CL:0000827,6.70e-08,11;CL:0000791,4.38e-07,9;CL:0000789,4.38e-07,9;CL:0002420,4.38e-07,9;CL:0002419,4.38e-07,9;CL:0000790,4.38e-07,9;CL:0000763,8.63e-07,16;CL:0000066,9.43e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.66e-12!46;UBERON:0002193!3.46e-08!48;UBERON:0002390!7.39e-08!45;UBERON:0003061!7.39e-08!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-12,46;UBERON:0002193,3.46e-08,48;UBERON:0002405,3.46e-08,48;UBERON:0002390,7.39e-08,45;UBERON:0003061,7.39e-08,45 | |||
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| |||
|short_description=p1@Gm13826,p1@Rpl37 | |||
}} |
Revision as of 10:32, 13 September 2013
Short description: | p1@Gm13826, p1@Rpl37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm13826_5end, CAGE_peak_1_at_Rpl37_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | 21bp_to_ENSMUST00000045356, NM_026069, uc007vcs.2_5end |
EntrezGene: | 100502825,67281 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.04e-16 | 97 |
hematopoietic cell | 1.92e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.92e-15 | 32 |
hematopoietic stem cell | 1.92e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.92e-15 | 32 |
somatic stem cell | 1.11e-13 | 91 |
multi fate stem cell | 1.11e-13 | 91 |
connective tissue cell | 1.66e-12 | 46 |
mesenchymal cell | 1.66e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 1.71e-12 | 25 |
motile cell | 3.63e-09 | 54 |
lymphoid lineage restricted progenitor cell | 1.34e-08 | 12 |
common myeloid progenitor | 2.28e-08 | 19 |
lymphocyte | 2.40e-08 | 13 |
common lymphoid progenitor | 2.40e-08 | 13 |
leukocyte | 4.24e-08 | 17 |
nongranular leukocyte | 4.24e-08 | 17 |
T cell | 6.70e-08 | 11 |
pro-T cell | 6.70e-08 | 11 |
mature alpha-beta T cell | 4.38e-07 | 9 |
alpha-beta T cell | 4.38e-07 | 9 |
immature T cell | 4.38e-07 | 9 |
mature T cell | 4.38e-07 | 9 |
immature alpha-beta T cell | 4.38e-07 | 9 |
myeloid cell | 8.63e-07 | 16 |
epithelial cell | 9.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.66e-12 | 46 |
hemolymphoid system | 3.46e-08 | 48 |
immune system | 3.46e-08 | 48 |
hematopoietic system | 7.39e-08 | 45 |
blood island | 7.39e-08 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.