FFCP PHASE1:Mm9::chr16:17646606..17646623,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72315|HGNC=|MCL_coexpression_id=204|UniProt=E9Q9U8|association_with_transcript=43bp_to_ENSMUST00000056962,NM_001166164,uc012abv.1_5end|description=CAGE_peak_2_at_Ccdc74a_5end|id=chr16:17646606..17646623,+|ontology_enrichment_celltype=CL:0000221!4.58e-08!44;CL:0000133!4.58e-08!44;CL:0002319!1.08e-07!43;CL:0000117!3.16e-07!23;CL:0000337!3.16e-07!23;CL:0000055!5.35e-07!50|ontology_enrichment_celltype_v019_2=CL:0002453,1.95e-11,8;CL:0000221,7.86e-09,44;CL:0000133,7.86e-09,44;CL:0000333,9.94e-09,10;CL:0000095,9.94e-09,10;CL:0000243,9.94e-09,10;CL:0000123,9.94e-09,10;CL:0000125,9.94e-09,10;CL:0000030,9.94e-09,10;CL:0000339,9.94e-09,10;CL:0000128,1.32e-08,6;CL:0000126,1.32e-08,6;CL:0000127,1.32e-08,6;CL:0002319,3.09e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.20e-22!102;UBERON:0000924!4.20e-22!102;UBERON:0006601!4.20e-22!102;UBERON:0000033!1.17e-21!63;UBERON:0001049!1.14e-20!52;UBERON:0005068!1.14e-20!52;UBERON:0006241!1.14e-20!52;UBERON:0007135!1.14e-20!52;UBERON:0001017!3.25e-20!73;UBERON:0005743!3.25e-20!73;UBERON:0000073!8.32e-20!75;UBERON:0001016!8.32e-20!75;UBERON:0002616!1.91e-19!49;UBERON:0000955!1.67e-18!50;UBERON:0006238!1.67e-18!50;UBERON:0002346!2.12e-18!71;UBERON:0003075!2.12e-18!71;UBERON:0007284!2.12e-18!71;UBERON:0003056!2.69e-17!49;UBERON:0003080!3.02e-14!40;UBERON:0002780!8.29e-14!39;UBERON:0001890!8.29e-14!39;UBERON:0006240!8.29e-14!39;UBERON:0002020!1.72e-13!34;UBERON:0002791!1.68e-11!29;UBERON:0003528!1.68e-11!29;UBERON:0001893!1.68e-11!29;UBERON:0007811!7.16e-11!86;UBERON:0000153!1.02e-10!94;UBERON:0000956!2.41e-08!21;UBERON:0001869!2.41e-08!21;UBERON:0000203!2.41e-08!21;UBERON:0002619!4.95e-08!17;UBERON:0003076!2.67e-07!12;UBERON:0003057!2.67e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.82e-26,95;UBERON:0000924,8.82e-26,95;UBERON:0006601,8.82e-26,95;UBERON:0001017,3.86e-25,73;UBERON:0000073,6.82e-25,54;UBERON:0001016,4.16e-24,75;UBERON:0001049,3.40e-23,52;UBERON:0005068,3.40e-23,52;UBERON:0006241,3.40e-23,52;UBERON:0007135,3.40e-23,52;UBERON:0010371,4.02e-23,73;UBERON:0002346,8.39e-22,64;UBERON:0003075,8.39e-22,64;UBERON:0007284,8.39e-22,64;UBERON:0002616,2.17e-20,46;UBERON:0000955,9.56e-20,47;UBERON:0006238,9.56e-20,47;UBERON:0002020,1.48e-15,34;UBERON:0003056,7.36e-15,49;UBERON:0003080,1.89e-14,40;UBERON:0010314,3.52e-14,92;UBERON:0003528,5.34e-14,29;UBERON:0002791,5.34e-14,29;UBERON:0001893,5.34e-14,29;UBERON:0002780,1.01e-13,39;UBERON:0001890,1.01e-13,39;UBERON:0006240,1.01e-13,39;UBERON:0002619,4.31e-10,17;UBERON:0003076,5.62e-10,12;UBERON:0003057,5.62e-10,12;UBERON:0000956,5.29e-09,21;UBERON:0001869,5.29e-09,21;UBERON:0000203,5.29e-09,21;UBERON:0002021,1.88e-08,10;UBERON:0000411,1.88e-08,10;UBERON:0001950,1.88e-08,10;UBERON:0004733,3.42e-08,6;UBERON:0004732,3.42e-08,6;UBERON:0002028,3.42e-08,6;UBERON:0007277,3.42e-08,6;UBERON:0000025,9.62e-08,114;UBERON:0004111,9.87e-08,122|phase1_expression=1.92178616525753,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0.174840804837995,1.33243904726265,0.809901069559304,3.49780939064073,0,0,0,1.7008658030214,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,4.69434806608824,2.18025156380447,4.83309602015838,4.47188767870852,1.81982348112971,7.18762821824858,0,0,0,0,0.286533439938757,1.03134418455488,1.41621522601718,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0.7104801149461,16.7776061890307,53.0221261343745,0.311068836925433,0.405017814995072,0.420649922702764,5.14171771926846,4.63823935998388,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,2.93680877595932,2.30409799884365,1.58263545276233,0.365950574409639,1.04182674111352,1.3959149950069,3.37657566019008,2.90316670775939,1.17851434189467,0.711858403995515,0.559198337475902,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,1.87473354835864,2.59786004602869,2.12003744706204,1.54927761754349,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.470354828542819,0,1.97755974187499,0,0,0.323533699894818,0.220841518460394,0,0,4.9772735491963,4.81727425670947,0,0,0,0,1.49790639404823,1.37250180845588,2.26177833803156,3.12883776346098,3.83573185995496,3.32460871295296,1.62241263067758,0.407357455401265,0.746441823660558,1.76905930903572,0.631325567659422,0.780722657776222,1.14951052216736,1.98068342785884,0.60281927134286,2.51735046859913,0.768682321709099,0.937017245597288,1.29351685369508,0.215567992932842,0,0.175951124163949,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,3.99550902271842,1.9551876352064,0,0.264450566663544,0,0,0.257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| ||
|EntrezGene=72315 | |||
|HGNC= | |||
|MCL_coexpression_id=204 | |||
|UniProt=E9Q9U8 | |||
|association_with_transcript=43bp_to_ENSMUST00000056962,NM_001166164,uc012abv.1_5end | |||
|description=CAGE_peak_2_at_Ccdc74a_5end | |||
|id=chr16:17646606..17646623,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.58e-08!44;CL:0000133!4.58e-08!44;CL:0002319!1.08e-07!43;CL:0000117!3.16e-07!23;CL:0000337!3.16e-07!23;CL:0000055!5.35e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.95e-11,8;CL:0000221,7.86e-09,44;CL:0000133,7.86e-09,44;CL:0000333,9.94e-09,10;CL:0000095,9.94e-09,10;CL:0000243,9.94e-09,10;CL:0000123,9.94e-09,10;CL:0000125,9.94e-09,10;CL:0000030,9.94e-09,10;CL:0000339,9.94e-09,10;CL:0000128,1.32e-08,6;CL:0000126,1.32e-08,6;CL:0000127,1.32e-08,6;CL:0002319,3.09e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.20e-22!102;UBERON:0000924!4.20e-22!102;UBERON:0006601!4.20e-22!102;UBERON:0000033!1.17e-21!63;UBERON:0001049!1.14e-20!52;UBERON:0005068!1.14e-20!52;UBERON:0006241!1.14e-20!52;UBERON:0007135!1.14e-20!52;UBERON:0001017!3.25e-20!73;UBERON:0005743!3.25e-20!73;UBERON:0000073!8.32e-20!75;UBERON:0001016!8.32e-20!75;UBERON:0002616!1.91e-19!49;UBERON:0000955!1.67e-18!50;UBERON:0006238!1.67e-18!50;UBERON:0002346!2.12e-18!71;UBERON:0003075!2.12e-18!71;UBERON:0007284!2.12e-18!71;UBERON:0003056!2.69e-17!49;UBERON:0003080!3.02e-14!40;UBERON:0002780!8.29e-14!39;UBERON:0001890!8.29e-14!39;UBERON:0006240!8.29e-14!39;UBERON:0002020!1.72e-13!34;UBERON:0002791!1.68e-11!29;UBERON:0003528!1.68e-11!29;UBERON:0001893!1.68e-11!29;UBERON:0007811!7.16e-11!86;UBERON:0000153!1.02e-10!94;UBERON:0000956!2.41e-08!21;UBERON:0001869!2.41e-08!21;UBERON:0000203!2.41e-08!21;UBERON:0002619!4.95e-08!17;UBERON:0003076!2.67e-07!12;UBERON:0003057!2.67e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.82e-26,95;UBERON:0000924,8.82e-26,95;UBERON:0006601,8.82e-26,95;UBERON:0001017,3.86e-25,73;UBERON:0000073,6.82e-25,54;UBERON:0001016,4.16e-24,75;UBERON:0001049,3.40e-23,52;UBERON:0005068,3.40e-23,52;UBERON:0006241,3.40e-23,52;UBERON:0007135,3.40e-23,52;UBERON:0010371,4.02e-23,73;UBERON:0002346,8.39e-22,64;UBERON:0003075,8.39e-22,64;UBERON:0007284,8.39e-22,64;UBERON:0002616,2.17e-20,46;UBERON:0000955,9.56e-20,47;UBERON:0006238,9.56e-20,47;UBERON:0002020,1.48e-15,34;UBERON:0003056,7.36e-15,49;UBERON:0003080,1.89e-14,40;UBERON:0010314,3.52e-14,92;UBERON:0003528,5.34e-14,29;UBERON:0002791,5.34e-14,29;UBERON:0001893,5.34e-14,29;UBERON:0002780,1.01e-13,39;UBERON:0001890,1.01e-13,39;UBERON:0006240,1.01e-13,39;UBERON:0002619,4.31e-10,17;UBERON:0003076,5.62e-10,12;UBERON:0003057,5.62e-10,12;UBERON:0000956,5.29e-09,21;UBERON:0001869,5.29e-09,21;UBERON:0000203,5.29e-09,21;UBERON:0002021,1.88e-08,10;UBERON:0000411,1.88e-08,10;UBERON:0001950,1.88e-08,10;UBERON:0004733,3.42e-08,6;UBERON:0004732,3.42e-08,6;UBERON:0002028,3.42e-08,6;UBERON:0007277,3.42e-08,6;UBERON:0000025,9.62e-08,114;UBERON:0004111,9.87e-08,122 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0.174840804837995,1.33243904726265,0.809901069559304,3.49780939064073,0,0,0,1.7008658030214,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,4.69434806608824,2.18025156380447,4.83309602015838,4.47188767870852,1.81982348112971,7.18762821824858,0,0,0,0,0.286533439938757,1.03134418455488,1.41621522601718,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0.7104801149461,16.7776061890307,53.0221261343745,0.311068836925433,0.405017814995072,0.420649922702764,5.14171771926846,4.63823935998388,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,2.93680877595932,2.30409799884365,1.58263545276233,0.365950574409639,1.04182674111352,1.3959149950069,3.37657566019008,2.90316670775939,1.17851434189467,0.711858403995515,0.559198337475902,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,1.87473354835864,2.59786004602869,2.12003744706204,1.54927761754349,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.470354828542819,0,1.97755974187499,0,0,0.323533699894818,0.220841518460394,0,0,4.9772735491963,4.81727425670947,0,0,0,0,1.49790639404823,1.37250180845588,2.26177833803156,3.12883776346098,3.83573185995496,3.32460871295296,1.62241263067758,0.407357455401265,0.746441823660558,1.76905930903572,0.631325567659422,0.780722657776222,1.14951052216736,1.98068342785884,0.60281927134286,2.51735046859913,0.768682321709099,0.937017245597288,1.29351685369508,0.215567992932842,0,0.175951124163949,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,3.99550902271842,1.9551876352064,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,0,0,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0,0.704070744865506,0.670025029767263,1.42826184531608,1.17080188714679,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,6.39293554924747,3.58717770196152,2.40825884981688,1.52375192569864,1.3114795630134,0,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.425820255624806,0.35613120733451,0.651547837414304,0,0,0,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0.720244376125241,1.16422815404479,0.428674070063185,0.354680467284547,0.535106452806212,0.329098041204242,2.74018454203139,0,0,0,0.8244312647074,0.161464426695906,0.422190474497091,0.358117032009409,0.656563598980245,0,2.78137953015765,1.36696704638282,0.412773735926445,0.185194527369712,0.565105371014073,1.0935538217682,0.686334519619568,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0,0,0,5.07323644815771,0.299033092087958,0.330916980914195,0.583353565032143,0.129159823477731,0,0,0,0,2.41584120826006,2.01621004380506,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0,2.25900737046827,2.30162618253588,1.14579102687879,3.26521046453006,2.05524755931193,0.755393897389701,2.70009000092722,1.80128481289688,1.35942722695261,1.55328093525546,0.207574695168353,0.399024873401031,0.170733605754134,0.486213434136588,0.838452650511929,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.640251524048693,0.574354689556133,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.658765662907314,0.423073039458382,0.548783918618318,0.789209134313529,0,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.499621155875892,0,0.429742108096597,1.14772999241306,0.220591419119515,0.927471342481686 | |||
|short_description=p2@Ccdc74a | |||
}} |
Revision as of 12:04, 13 September 2013
Short description: | p2@Ccdc74a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc74a_5end |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | 43bp_to_ENSMUST00000056962, NM_001166164, uc012abv.1_5end |
EntrezGene: | Ccdc74a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.95e-11 | 8 |
ectodermal cell | 7.86e-09 | 44 |
neurectodermal cell | 7.86e-09 | 44 |
migratory neural crest cell | 9.94e-09 | 10 |
neuron associated cell | 9.94e-09 | 10 |
glial cell (sensu Vertebrata) | 9.94e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 9.94e-09 | 10 |
glial cell | 9.94e-09 | 10 |
glioblast | 9.94e-09 | 10 |
glioblast (sensu Vertebrata) | 9.94e-09 | 10 |
oligodendrocyte | 1.32e-08 | 6 |
macroglial cell | 1.32e-08 | 6 |
astrocyte | 1.32e-08 | 6 |
neural cell | 3.09e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.