FFCP PHASE1:Mm9::chr16:48772258..48772270,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77647|HGNC=|MCL_coexpression_id=785|UniProt=Q3UU67|association_with_transcript=-7bp_to_ENSMUST00000071647,ENSMUST00000099715_5end|description=CAGE_peak_5_at_Trat1_5end|id=chr16:48772258..48772270,-|ontology_enrichment_celltype=CL:0000084!2.51e-27!11;CL:0000827!2.51e-27!11;CL:0000838!7.48e-25!12;CL:0000791!5.64e-23!9;CL:0000789!5.64e-23!9;CL:0002420!5.64e-23!9;CL:0002419!5.64e-23!9;CL:0000790!5.64e-23!9;CL:0000542!9.29e-23!13;CL:0000051!9.29e-23!13;CL:0000624!6.24e-21!8;CL:0000738!7.57e-17!17;CL:0002087!7.57e-17!17;CL:0000893!1.96e-16!6;CL:0002489!1.96e-16!6;CL:0000898!1.96e-16!6;CL:0000809!1.96e-16!6;CL:0000810!1.96e-16!6;CL:0000895!1.96e-16!6;CL:0000808!1.96e-16!6;CL:0000894!1.96e-16!6;CL:0000806!1.96e-16!6;CL:0000807!1.96e-16!6;CL:0000805!1.96e-16!6;CL:0002425!1.96e-16!6;CL:0002436!1.96e-16!6;CL:0002427!1.96e-16!6;CL:0002428!1.96e-16!6;CL:0002429!1.96e-16!6;CL:0002433!1.96e-16!6;CL:0002431!1.96e-16!6;CL:0002432!1.96e-16!6;CL:0002031!6.36e-15!25;CL:0000988!4.95e-11!32;CL:0002032!4.95e-11!32;CL:0000037!4.95e-11!32;CL:0000566!4.95e-11!32;CL:0000837!4.95e-11!32;CL:0002320!7.77e-07!46;CL:0000134!7.77e-07!46|ontology_enrichment_celltype_v019_2=CL:0000624,2.05e-21,8;CL:0000893,1.96e-20,6;CL:0002489,1.96e-20,6;CL:0000898,1.96e-20,6;CL:0000809,1.96e-20,6;CL:0000810,1.96e-20,6;CL:0000895,1.96e-20,6;CL:0000808,1.96e-20,6;CL:0000894,1.96e-20,6;CL:0000806,1.96e-20,6;CL:0000807,1.96e-20,6;CL:0000805,1.96e-20,6;CL:0002425,1.96e-20,6;CL:0002436,1.96e-20,6;CL:0002427,1.96e-20,6;CL:0002428,1.96e-20,6;CL:0002429,1.96e-20,6;CL:0002433,1.96e-20,6;CL:0002431,1.96e-20,6;CL:0002432,1.96e-20,6;CL:0000791,5.42e-19,9;CL:0000789,5.42e-19,9;CL:0002420,5.42e-19,9;CL:0002419,5.42e-19,9;CL:0000790,5.42e-19,9;CL:0000084,1.83e-15,11;CL:0000827,1.83e-15,11;CL:0000838,3.86e-14,12;CL:0000542,5.11e-13,13;CL:0000051,5.11e-13,13;CL:0000738,7.62e-10,17;CL:0002087,7.62e-10,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!6.08e-39!23;UBERON:0000974!6.08e-39!23;UBERON:0004807!6.08e-39!23;UBERON:0005058!6.08e-39!23;UBERON:0003351!6.08e-39!23;UBERON:0009113!6.08e-39!23;UBERON:0003295!6.08e-39!23;UBERON:0009722!6.08e-39!23;UBERON:0005562!6.08e-39!23;UBERON:0007690!6.08e-39!23;UBERON:0006562!3.97e-37!24;UBERON:0003408!3.97e-37!24;UBERON:0001557!3.97e-37!24;UBERON:0001042!3.97e-37!24;UBERON:0008814!3.97e-37!24;UBERON:0009145!3.97e-37!24;UBERON:0004177!2.04e-36!29;UBERON:0000072!1.72e-32!27;UBERON:0000063!1.22e-26!35;UBERON:0002193!1.26e-26!48;UBERON:0002390!2.99e-26!45;UBERON:0003061!2.99e-26!45;UBERON:0005057!1.21e-20!51;UBERON:0000065!7.88e-20!41;UBERON:0001004!3.00e-19!42;UBERON:0002405!3.10e-18!70;UBERON:0003929!2.44e-15!55;UBERON:0002368!1.15e-13!60;UBERON:0003081!3.30e-13!88;UBERON:0002530!2.99e-12!65;UBERON:0000064!3.43e-12!99;UBERON:0000490!5.41e-12!66;UBERON:0005911!2.87e-11!69;UBERON:0000949!1.33e-10!72;UBERON:0001041!3.68e-09!92;UBERON:0000077!1.98e-08!97;UBERON:0007811!3.95e-07!86;UBERON:0000153!5.22e-07!94;UBERON:0002384!7.77e-07!46;UBERON:0004921!8.38e-07!126;UBERON:0004185!8.38e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.93e-57,23;UBERON:0000974,6.93e-57,23;UBERON:0004807,6.93e-57,23;UBERON:0005058,6.93e-57,23;UBERON:0003351,6.93e-57,23;UBERON:0009113,6.93e-57,23;UBERON:0003295,6.93e-57,23;UBERON:0009722,6.93e-57,23;UBERON:0005562,6.93e-57,23;UBERON:0007690,6.93e-57,23;UBERON:0006562,2.00e-54,24;UBERON:0003408,2.00e-54,24;UBERON:0001557,2.00e-54,24;UBERON:0001042,2.00e-54,24;UBERON:0008814,2.00e-54,24;UBERON:0009145,2.00e-54,24;UBERON:0000072,3.92e-48,27;UBERON:0004177,1.17e-44,29;UBERON:0005057,1.17e-44,29;UBERON:0000077,1.29e-36,35;UBERON:0007811,1.55e-35,36;UBERON:0000065,6.38e-31,41;UBERON:0001004,3.95e-30,42;UBERON:0000153,2.25e-29,43;UBERON:0002390,5.77e-28,45;UBERON:0003061,5.77e-28,45;UBERON:0002193,4.53e-26,48;UBERON:0002405,4.53e-26,48;UBERON:0003929,2.40e-25,55;UBERON:0002368,4.96e-23,60;UBERON:0002530,4.52e-21,65;UBERON:0000490,1.03e-20,66;UBERON:0005911,1.05e-19,69;UBERON:0000949,8.82e-19,72;UBERON:0001041,1.19e-16,80;UBERON:0003081,2.79e-13,87;UBERON:0004921,6.56e-11,114;UBERON:0001007,1.12e-10,116;UBERON:0001555,1.12e-10,116;UBERON:0007026,1.12e-10,116;UBERON:0004119,1.89e-10,118;UBERON:0000925,1.89e-10,118;UBERON:0006595,1.89e-10,118;UBERON:0000926,6.52e-09,120;UBERON:0004120,6.52e-09,120;UBERON:0006603,6.52e-09,120;UBERON:0001048,7.05e-09,134|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,3.23814060948833,5.38348410540585,6.50628279256919,4.70655738072485,0.513602189793617,1.13646523144697,0,0,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=77647 | |||
|HGNC= | |||
|MCL_coexpression_id=785 | |||
|UniProt=Q3UU67 | |||
|association_with_transcript=-7bp_to_ENSMUST00000071647,ENSMUST00000099715_5end | |||
|description=CAGE_peak_5_at_Trat1_5end | |||
|id=chr16:48772258..48772270,- | |||
|ontology_enrichment_celltype=CL:0000084!2.51e-27!11;CL:0000827!2.51e-27!11;CL:0000838!7.48e-25!12;CL:0000791!5.64e-23!9;CL:0000789!5.64e-23!9;CL:0002420!5.64e-23!9;CL:0002419!5.64e-23!9;CL:0000790!5.64e-23!9;CL:0000542!9.29e-23!13;CL:0000051!9.29e-23!13;CL:0000624!6.24e-21!8;CL:0000738!7.57e-17!17;CL:0002087!7.57e-17!17;CL:0000893!1.96e-16!6;CL:0002489!1.96e-16!6;CL:0000898!1.96e-16!6;CL:0000809!1.96e-16!6;CL:0000810!1.96e-16!6;CL:0000895!1.96e-16!6;CL:0000808!1.96e-16!6;CL:0000894!1.96e-16!6;CL:0000806!1.96e-16!6;CL:0000807!1.96e-16!6;CL:0000805!1.96e-16!6;CL:0002425!1.96e-16!6;CL:0002436!1.96e-16!6;CL:0002427!1.96e-16!6;CL:0002428!1.96e-16!6;CL:0002429!1.96e-16!6;CL:0002433!1.96e-16!6;CL:0002431!1.96e-16!6;CL:0002432!1.96e-16!6;CL:0002031!6.36e-15!25;CL:0000988!4.95e-11!32;CL:0002032!4.95e-11!32;CL:0000037!4.95e-11!32;CL:0000566!4.95e-11!32;CL:0000837!4.95e-11!32;CL:0002320!7.77e-07!46;CL:0000134!7.77e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.05e-21,8;CL:0000893,1.96e-20,6;CL:0002489,1.96e-20,6;CL:0000898,1.96e-20,6;CL:0000809,1.96e-20,6;CL:0000810,1.96e-20,6;CL:0000895,1.96e-20,6;CL:0000808,1.96e-20,6;CL:0000894,1.96e-20,6;CL:0000806,1.96e-20,6;CL:0000807,1.96e-20,6;CL:0000805,1.96e-20,6;CL:0002425,1.96e-20,6;CL:0002436,1.96e-20,6;CL:0002427,1.96e-20,6;CL:0002428,1.96e-20,6;CL:0002429,1.96e-20,6;CL:0002433,1.96e-20,6;CL:0002431,1.96e-20,6;CL:0002432,1.96e-20,6;CL:0000791,5.42e-19,9;CL:0000789,5.42e-19,9;CL:0002420,5.42e-19,9;CL:0002419,5.42e-19,9;CL:0000790,5.42e-19,9;CL:0000084,1.83e-15,11;CL:0000827,1.83e-15,11;CL:0000838,3.86e-14,12;CL:0000542,5.11e-13,13;CL:0000051,5.11e-13,13;CL:0000738,7.62e-10,17;CL:0002087,7.62e-10,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.08e-39!23;UBERON:0000974!6.08e-39!23;UBERON:0004807!6.08e-39!23;UBERON:0005058!6.08e-39!23;UBERON:0003351!6.08e-39!23;UBERON:0009113!6.08e-39!23;UBERON:0003295!6.08e-39!23;UBERON:0009722!6.08e-39!23;UBERON:0005562!6.08e-39!23;UBERON:0007690!6.08e-39!23;UBERON:0006562!3.97e-37!24;UBERON:0003408!3.97e-37!24;UBERON:0001557!3.97e-37!24;UBERON:0001042!3.97e-37!24;UBERON:0008814!3.97e-37!24;UBERON:0009145!3.97e-37!24;UBERON:0004177!2.04e-36!29;UBERON:0000072!1.72e-32!27;UBERON:0000063!1.22e-26!35;UBERON:0002193!1.26e-26!48;UBERON:0002390!2.99e-26!45;UBERON:0003061!2.99e-26!45;UBERON:0005057!1.21e-20!51;UBERON:0000065!7.88e-20!41;UBERON:0001004!3.00e-19!42;UBERON:0002405!3.10e-18!70;UBERON:0003929!2.44e-15!55;UBERON:0002368!1.15e-13!60;UBERON:0003081!3.30e-13!88;UBERON:0002530!2.99e-12!65;UBERON:0000064!3.43e-12!99;UBERON:0000490!5.41e-12!66;UBERON:0005911!2.87e-11!69;UBERON:0000949!1.33e-10!72;UBERON:0001041!3.68e-09!92;UBERON:0000077!1.98e-08!97;UBERON:0007811!3.95e-07!86;UBERON:0000153!5.22e-07!94;UBERON:0002384!7.77e-07!46;UBERON:0004921!8.38e-07!126;UBERON:0004185!8.38e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.93e-57,23;UBERON:0000974,6.93e-57,23;UBERON:0004807,6.93e-57,23;UBERON:0005058,6.93e-57,23;UBERON:0003351,6.93e-57,23;UBERON:0009113,6.93e-57,23;UBERON:0003295,6.93e-57,23;UBERON:0009722,6.93e-57,23;UBERON:0005562,6.93e-57,23;UBERON:0007690,6.93e-57,23;UBERON:0006562,2.00e-54,24;UBERON:0003408,2.00e-54,24;UBERON:0001557,2.00e-54,24;UBERON:0001042,2.00e-54,24;UBERON:0008814,2.00e-54,24;UBERON:0009145,2.00e-54,24;UBERON:0000072,3.92e-48,27;UBERON:0004177,1.17e-44,29;UBERON:0005057,1.17e-44,29;UBERON:0000077,1.29e-36,35;UBERON:0007811,1.55e-35,36;UBERON:0000065,6.38e-31,41;UBERON:0001004,3.95e-30,42;UBERON:0000153,2.25e-29,43;UBERON:0002390,5.77e-28,45;UBERON:0003061,5.77e-28,45;UBERON:0002193,4.53e-26,48;UBERON:0002405,4.53e-26,48;UBERON:0003929,2.40e-25,55;UBERON:0002368,4.96e-23,60;UBERON:0002530,4.52e-21,65;UBERON:0000490,1.03e-20,66;UBERON:0005911,1.05e-19,69;UBERON:0000949,8.82e-19,72;UBERON:0001041,1.19e-16,80;UBERON:0003081,2.79e-13,87;UBERON:0004921,6.56e-11,114;UBERON:0001007,1.12e-10,116;UBERON:0001555,1.12e-10,116;UBERON:0007026,1.12e-10,116;UBERON:0004119,1.89e-10,118;UBERON:0000925,1.89e-10,118;UBERON:0006595,1.89e-10,118;UBERON:0000926,6.52e-09,120;UBERON:0004120,6.52e-09,120;UBERON:0006603,6.52e-09,120;UBERON:0001048,7.05e-09,134 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,3.23814060948833,5.38348410540585,6.50628279256919,4.70655738072485,0.513602189793617,1.13646523144697,0,0,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16011120628178,0,0.205421914329655,1.03936658382236,1.07416017400489,2.78153896693771,1.44234539423963,1.32920574457119,2.3222283488074,1.82896335972,2.82313318383153,2.72882066071307,2.21287235772758,2.80504565235765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Trat1 | |||
}} |
Revision as of 12:49, 13 September 2013
Short description: | p5@Trat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Trat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:785 |
Association with transcript: | -7bp_to_ENSMUST00000071647, ENSMUST00000099715_5end |
EntrezGene: | Trat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.