FFCP PHASE1:Hg19::chr5:121414004..121414025,-: Difference between revisions
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{{FFCP | 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184408,18.1687431831047,13.6940476170855,63.6406495851874,45.5270211315553,43.8888796503288,35.9643508954232,30.3955998051871,65.5071240297544,47.5530963519025,18.5353720745152,12.6784772163293,68.4834905863909,21.1300293513511,31.6679794466527,33.9373036688911,50.8536524791093,132.32768245107,45.1138503164029,103.912859805142,31.8326543846678,12.462000288886,60.0614715809604,22.9269388593815,31.2682118810788,37.7171856296655,69.8550681603291,48.8639340529313,4.25713276884717,61.2212142363226,95.1662240654116,5.69209760648573,8.39843328587959,0.288666338176536,2.68120910214315,0,1.60044461320525,0,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0,1.23087398947712,0,0,0,0,3.07667176470977,0,0.111443384277478,0,14.3246690842614,2.07875276582847,2.15012491469462,0,0.140669416410513,48.3079779799412,0,0,5.18044769452781,1.38141957765574,0,0.306806047506464,0,223.015384353516,0.898683511473268,0,0,3.55116260292961,0,145.589457089474,0,0.278304294485554,0,0,0,2.89999830173917,1.0241410345695,0,0,0,5.83209226766509,1.38899995946634,0,0.120596438625408,0,0,0.886642856860642,0.658156191461918,2.39664619741778,18.96162922189,1.15425387755696,2.73460934032803,0,0,0.217294743844016,8.93203247249374,20.5178609220172,1.06606955203727,0,0,0,0,0,0,0,0,0,1.30586246527318,0.565412285735763,0,0.995261931078505,1.76915129006678,4.27721101453538,0,0,0,0,9.63093176758547,0,0,0,0,0.394584402849391,2.41981432097328,3.67287313956588,9.85710642204412,0,0.207376382794494,0,0,0.627865836814451,0,0.853828638089378,0,0.347119476670262,0.0979923974143777,2.00236175134926,1.39781334593624,478.293156303566,0.677294319023596,1.82723292715464,1.97077096927702,1.74580229679155,0,7.00540296419651,6.44097045839729,2.38457534043588,0.126621591911757,0,0,1.70762395791482,3.9961921916426,0,0,0.171594997861965,0,0.99402028452346,0,17.6675467895698,21.338980647716,5.09991088181609,4.04530825862126,0.600420288709789,0.136905378891993,0,232.503103808197,0,1.39641200636127,1.14580212005842,7.89660327034495,1.19807400299395,0.429226048136571,0.223171457441873,3.22480667936286,227.349226515257,0,5.6723891261201,4.12079291905832,5.19007287677224,0.196854963029498,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.182248669974074,0.335434687599266,1.26089131678717,3.93409411012486,106.233938538523,0,1.91915197319445,1.42939065274673,1.32418394073086,0,117.830913580556,114.941458329769,60.0920742601313,3.59190574687462,0,9.88250526355446,3.62598692864402,0.146552233678082,1.32506888912221,0.129282956361551,0,0.171086837884329,0,3.73755943986931,8.80344108558129,1.65695622138878,0.992332043623902,0,0,0,1.08803560673895,1.7548292581589,3.67614692116154,2.29510841496863,0,0,0.122026264901963,0,0,0,0.807253238237985,3.597064508342,0.499921631848426,0,0,4.47005057426526,0,0,45.074950471836,63.5700202784451,120.94767780757,17.6144794905833,31.4459877190719,36.482260085458,58.3542174412155,32.9683413803861,16.6317804623575,11.2369913992122,38.8684111879434,88.1614099840665,32.294695030262,54.7412194349929,136.376799568251,102.783777176912,94.5120360592504,168.315903778608,52.4863245834014,30.7324234052325,34.1565571395113,99.7672583738761,204.22319090239,8.80061082258938,78.2942207816768,87.2181175903731,118.613804334932,1.15571898244382,4.50327341887344,0.260994291965212,17.456356264445,64.5947703363497,6.11841761266169,42.8022330184755,8.33763907334625,21.4898368587133,62.1945793729501,43.019830534414,29.2270422329816,0,0.690860683462397,16.4084376335786,0.138258436151731,0,0,0,1.31043939538565,55.0531315608331,0,0,0,0,10.7828031177699,0.920529751259204,0.139879507719444,4.97661808026378,1.40683808434017,0,0.786329709279482,1.63814457288021,1.18812770967818,1.06287460050841,0,4.46915934378595,193.982653898585,0.0788617450012534,0,35.2675943690684,27.8683384391412,0.256916900385838,0,0,0,0.756215088665154,0.138314504928436,0.322951291263702,0,0,0.943757786781923,0,0.808679663052368,231.117549853103,1.3807198521202,6.56423532983707,1.65462722368366,48.4092164888448,0,0,5.56824519534329,0,0.135075169236789,0,0,0.19024743058172,0.546974809018219,0.548257766857182,0,2.63806866539431,5.87707167142138,0,0,0,0.227662191351298,3.01588058552972,0,18.863681038116,0.40781839786099,0.0657727735628491,0.236387681767936,0.111231401892069,1.25588948560822,0,0,2.73947616152849,0.431855182437243,58.7634576101072,0.500335809236594,0.158013611732727,0,0.347716544605159,8.81882501203278,4.76597177574985,5.63370974410035,6.91259661814092,0.430227358820278,7.45491604602562,9.03262090447071,0.423387050190929,0.4582137370881,13.0286681979014,0.955538938977433,0.671132590786754,0,0,0,1.43727929598746,8.11870101936739,14.085618798715,0,0,0,0,0.549702583727146,0,1.08043821351123,3.0598338470554,0,0.735444965261716,0.235676547101626,0.785233868459781,0,8.453114551668,170.606823146568,2.06764619555678,1.03132620757723,0,0.357107877211315,0.705789743431384,0.0802413666891683,4.3820183294791,0,0,0.157771562193185,0,1.30905207102113,2.645134202577,81.4669089785185,125.711770987746,236.646729481713,0.252332849670158,0.218531143927391,3.54755802832024,0,0,0.0918948995348449,0,1.81868875723775,0,0,0.103432995861895,0.639701945702943,6.90386851244847,0.0645889098360061,3.1037357147929,47.8803053219219,1.14564884900697,3.84022659020617,1.08858373948481,3.08009970976753,0.404112318087525,4.44677673434593,8.98182962674236,2.76771113277313,4.26909383510862,17.3765054058246,2.33545525477126,21.1176848163109,1.22241444182866,3.66206560484165,1.33151354837103,1.20764276154616,0|short_description=p3@LOX}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6664 | |||
|TSSclassifier=S | |||
|UniProt=P28300 | |||
|association_with_transcript=-24bp_to_ENST00000231004_5end | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_3_at_LOX_5end | |||
|id=chr5:121414004..121414025,- | |||
|ontology_enrichment_celltype=CL:0000055!7.65e-46!180;CL:0000057!1.42e-25!75;CL:0000222!1.17e-24!119;CL:0000680!3.46e-18!57;CL:0000056!3.46e-18!57;CL:0000355!3.46e-18!57;CL:0000187!3.78e-17!54;CL:0000183!6.07e-17!59;CL:0000192!8.84e-16!42;CL:0000514!8.84e-16!42;CL:0000220!5.04e-15!246;CL:0000393!8.20e-15!60;CL:0000211!8.20e-15!60;CL:0002321!1.51e-14!248;CL:0000359!1.52e-13!32;CL:0000144!3.01e-12!625;CL:0002620!4.96e-11!23;CL:0002371!1.77e-10!591;CL:0000548!5.06e-09!679;CL:0000004!5.06e-09!679;CL:0000255!5.06e-09!679;CL:0000012!8.03e-09!682;CL:0002334!3.23e-08!12;CL:0000213!2.23e-07!57;CL:0000215!2.23e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.32e-13;32!CL:0000192;2.37e-12;43!CL:0000057;2.87e-11;73!CL:0002620;3.16e-11;23!CL:0000187;2.48e-10;55!CL:0000134;4.09e-09;55!CL:0002334;9.64e-09;12!CL:0000048;1.09e-08;58!CL:0002320;1.53e-08;188!CL:0000723;1.75e-08;61!CL:0000393;2.02e-08;61!CL:0000211;2.02e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.38e-28,76;CL:0000222,9.86e-26,121;CL:0000680,1.21e-19,58;CL:0000056,1.21e-19,58;CL:0000355,1.21e-19,58;CL:0000187,1.59e-18,55;CL:0000192,4.97e-17,43;CL:0000514,4.97e-17,43;CL:0000393,5.12e-16,61;CL:0000211,5.12e-16,61;CL:0000359,1.80e-14,32;CL:0002321,4.21e-12,250;CL:0002620,3.08e-11,23;CL:0000048,4.34e-11,427;CL:0000723,5.23e-10,433;CL:0000034,1.93e-09,441;CL:0002334,9.85e-09,12;CL:0000213,1.85e-07,58;CL:0000215,1.85e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.37e-12;43!CL:0000355;1.39e-10;58!CL:0000222;2.15e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!4.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.61e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.64e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.14e-21!79;UBERON:0007798!1.14e-21!79;UBERON:0000914!1.93e-20!83;UBERON:0002329!1.93e-20!83;UBERON:0003077!1.93e-20!83;UBERON:0003059!1.93e-20!83;UBERON:0007282!1.93e-20!83;UBERON:0009618!1.93e-20!83;UBERON:0007285!1.93e-20!83;UBERON:0004290!2.04e-19!70;UBERON:0004872!4.33e-19!84;UBERON:0000055!7.33e-18!69;UBERON:0001134!2.59e-17!61;UBERON:0002036!2.59e-17!61;UBERON:0003082!2.59e-17!61;UBERON:0005256!3.35e-17!143;UBERON:0002385!9.18e-17!63;UBERON:0001015!9.18e-17!63;UBERON:0000383!9.18e-17!63;UBERON:0001981!1.07e-16!60;UBERON:0007500!1.07e-16!60;UBERON:0004537!1.07e-16!60;UBERON:0006965!1.07e-16!60;UBERON:0000486!1.42e-16!82;UBERON:0003914!4.74e-16!118;UBERON:0004535!2.14e-15!110;UBERON:0001637!5.34e-15!42;UBERON:0003509!5.34e-15!42;UBERON:0004572!5.34e-15!42;UBERON:0001009!7.29e-15!113;UBERON:0000490!4.04e-14!138;UBERON:0004573!1.24e-12!33;UBERON:0004571!1.24e-12!33;UBERON:0002100!1.64e-11!216;UBERON:0000475!3.32e-10!365;UBERON:0000119!4.43e-09!312;UBERON:0000468!1.14e-08!659;UBERON:0000483!1.55e-08!309;UBERON:0003104!1.86e-08!238;UBERON:0009142!1.86e-08!238;UBERON:0000477!3.10e-08!286;UBERON:0000481!6.78e-08!347;UBERON:0000947!7.23e-08!21;UBERON:0010191!7.23e-08!21;UBERON:0002199!3.19e-07!45;UBERON:0002416!3.19e-07!45;UBERON:0003102!8.79e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.44e-12;33!UBERON:0004571;3.44e-12;33!UBERON:0001637;1.45e-11;42!UBERON:0003509;1.45e-11;42!UBERON:0004572;1.45e-11;42!UBERON:0007500;3.20e-10;56!UBERON:0001981;3.20e-10;56!UBERON:0004537;3.20e-10;56!UBERON:0002049;8.46e-10;75!UBERON:0007798;8.46e-10;75!UBERON:0000055;1.69e-09;65!UBERON:0002384;9.12e-09;198!UBERON:0000947;2.35e-08;21!UBERON:0010191;2.35e-08;21!UBERON:0003914;1.69e-07;74 | |||
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| |||
|short_description=p3@LOX | |||
}} |
Revision as of 12:52, 13 September 2013
Short description: | p3@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOX_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | -24bp_to_ENST00000231004_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | P28300 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.38e-28 | 76 |
mesodermal cell | 9.86e-26 | 121 |
muscle precursor cell | 1.21e-19 | 58 |
myoblast | 1.21e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-19 | 58 |
muscle cell | 1.59e-18 | 55 |
smooth muscle cell | 4.97e-17 | 43 |
smooth muscle myoblast | 4.97e-17 | 43 |
electrically responsive cell | 5.12e-16 | 61 |
electrically active cell | 5.12e-16 | 61 |
vascular associated smooth muscle cell | 1.80e-14 | 32 |
embryonic cell | 4.21e-12 | 250 |
skin fibroblast | 3.08e-11 | 23 |
multi fate stem cell | 4.34e-11 | 427 |
somatic stem cell | 5.23e-10 | 433 |
stem cell | 1.93e-09 | 441 |
preadipocyte | 9.85e-09 | 12 |
lining cell | 1.85e-07 | 58 |
barrier cell | 1.85e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.64e-07 | 14 |
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