FFCP PHASE1:Mm9::chr17:24670654..24670677,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=328778|HGNC=|MCL_coexpression_id=414|UniProt=Q504M8,Q8BNU1,Q148R0|association_with_transcript=14bp_to_ENSMUST00000035797,ENSMUST00000061764,NM_177375,uc008awu.2_5end|description=CAGE_peak_1_at_Rab26_5end|id=chr17:24670654..24670677,-|ontology_enrichment_celltype=CL:0000117!5.81e-08!23;CL:0000337!5.81e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.26e-08,23;CL:0000337,5.26e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.84e-18!52;UBERON:0005068!5.84e-18!52;UBERON:0006241!5.84e-18!52;UBERON:0007135!5.84e-18!52;UBERON:0000955!2.54e-17!50;UBERON:0006238!2.54e-17!50;UBERON:0002616!9.22e-17!49;UBERON:0001017!1.96e-15!73;UBERON:0005743!1.96e-15!73;UBERON:0000033!4.22e-15!63;UBERON:0002020!6.66e-15!34;UBERON:0000073!1.54e-14!75;UBERON:0001016!1.54e-14!75;UBERON:0003080!6.55e-14!40;UBERON:0002780!2.30e-13!39;UBERON:0001890!2.30e-13!39;UBERON:0006240!2.30e-13!39;UBERON:0002791!1.35e-12!29;UBERON:0003528!1.35e-12!29;UBERON:0001893!1.35e-12!29;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0004121!4.53e-11!102;UBERON:0000924!4.53e-11!102;UBERON:0006601!4.53e-11!102;UBERON:0003056!1.09e-10!49;UBERON:0002619!2.14e-09!17;UBERON:0001045!4.25e-09!13;UBERON:0000956!4.71e-09!21;UBERON:0001869!4.71e-09!21;UBERON:0000203!4.71e-09!21;UBERON:0001264!6.27e-09!12;UBERON:0003922!6.27e-09!12;UBERON:0002114!6.27e-09!12;UBERON:0003923!6.27e-09!12;UBERON:0003924!6.27e-09!12;UBERON:0003921!6.27e-09!12;UBERON:0007811!8.29e-09!86;UBERON:0000153!2.20e-08!94;UBERON:0002021!1.60e-07!10;UBERON:0000411!1.60e-07!10;UBERON:0001950!1.60e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.02e-24,54;UBERON:0001049,2.52e-22,52;UBERON:0005068,2.52e-22,52;UBERON:0006241,2.52e-22,52;UBERON:0007135,2.52e-22,52;UBERON:0001017,2.00e-21,73;UBERON:0001016,2.52e-20,75;UBERON:0000955,4.00e-19,47;UBERON:0006238,4.00e-19,47;UBERON:0002616,2.23e-18,46;UBERON:0002020,8.09e-18,34;UBERON:0003080,3.40e-16,40;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0002346,9.26e-16,64;UBERON:0003075,9.26e-16,64;UBERON:0007284,9.26e-16,64;UBERON:0002780,1.85e-15,39;UBERON:0001890,1.85e-15,39;UBERON:0006240,1.85e-15,39;UBERON:0010371,1.02e-14,73;UBERON:0003528,1.24e-14,29;UBERON:0002791,1.24e-14,29;UBERON:0001893,1.24e-14,29;UBERON:0001264,5.88e-12,12;UBERON:0003056,1.13e-11,49;UBERON:0002619,1.19e-11,17;UBERON:0002021,5.60e-10,10;UBERON:0000411,5.60e-10,10;UBERON:0001950,5.60e-10,10;UBERON:0000956,8.97e-10,21;UBERON:0001869,8.97e-10,21;UBERON:0000203,8.97e-10,21;UBERON:0010314,2.50e-08,92;UBERON:0007023,6.37e-07,51;UBERON:0002075,7.71e-07,19;UBERON:0003076,7.81e-07,12;UBERON:0003057,7.81e-07,12|phase1_expression=1.44133962394315,2.44282785347553,4.09499315450582,0,0,0.671517087647559,1.40167584357315,0,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0.42438965179803,3.656861476496,0,0,2.87986361028132,2.75291137280604,5.7423196411502,1.7230479846363,1.939241094173,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,1.74420125104357,2.41654801007919,3.30530828426282,1.1198913730029,2.87505128729943,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0,0.606949382578793,2.64495489636016,1.90149421051854,0,0,0.449949858640699,0,0,1.19840044207362,1.15265491596466,0.622137673850866,0.270011876663381,0.841299845405528,14.2825492201902,13.2521124570968,0.857435594504678,1.82106394934649,6.43453150627015,29.731287869835,16.0886045987337,15.9750794586493,2.90149833006426,2.47016637726506,4.16730696445408,18.7052609330925,25.3243174514256,27.350886352049,9.42811473515737,7.11858403995515,3.16879057903011,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,1.68533304158102,0,0,0,1.26759077799012,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,1.02765491747154,1.55362730188303,1.03909497345377,0.520455980298408,0,0.461230994512117,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0,0,0,1.86391761218122,5.85561594023094,6.91174132484402,5.36459815938042,0,1.19980546198682,0,18.8736205650077,26.992535566299,2.38743269014442,31.8098505951866,35.2887331115856,12.6750707181332,26.76980840618,0.305518091550949,10.5745925018579,55.0935613385411,0.631325567659422,0.130120442962704,0.459804208866946,0,0.753524089178575,0.272145996605311,0,0.187403449119458,1.03481348295606,0,0.378212160335639,1.75951124163949,1.31517439456545,0.556094498451196,0.348252166522167,0,0.995171334092466,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0.402619256281115,32.8052319760039,2.6755199218614,3.63460661282178,0,0.426576501070468,0.232236671860439,1.67527699718721,1.21010114774006,1.77902435075896,1.14135375667535,2.37264530772256,1.15289268306808,0.502670417600539,1.39269530428806,4.09424582950152,5.39291645192533,0,1.59313018603494,0.379335801906163,0.34274553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| ||
|EntrezGene=328778 | |||
|HGNC= | |||
|MCL_coexpression_id=414 | |||
|UniProt=Q504M8,Q8BNU1,Q148R0 | |||
|association_with_transcript=14bp_to_ENSMUST00000035797,ENSMUST00000061764,NM_177375,uc008awu.2_5end | |||
|description=CAGE_peak_1_at_Rab26_5end | |||
|id=chr17:24670654..24670677,- | |||
|ontology_enrichment_celltype=CL:0000117!5.81e-08!23;CL:0000337!5.81e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.26e-08,23;CL:0000337,5.26e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.84e-18!52;UBERON:0005068!5.84e-18!52;UBERON:0006241!5.84e-18!52;UBERON:0007135!5.84e-18!52;UBERON:0000955!2.54e-17!50;UBERON:0006238!2.54e-17!50;UBERON:0002616!9.22e-17!49;UBERON:0001017!1.96e-15!73;UBERON:0005743!1.96e-15!73;UBERON:0000033!4.22e-15!63;UBERON:0002020!6.66e-15!34;UBERON:0000073!1.54e-14!75;UBERON:0001016!1.54e-14!75;UBERON:0003080!6.55e-14!40;UBERON:0002780!2.30e-13!39;UBERON:0001890!2.30e-13!39;UBERON:0006240!2.30e-13!39;UBERON:0002791!1.35e-12!29;UBERON:0003528!1.35e-12!29;UBERON:0001893!1.35e-12!29;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0004121!4.53e-11!102;UBERON:0000924!4.53e-11!102;UBERON:0006601!4.53e-11!102;UBERON:0003056!1.09e-10!49;UBERON:0002619!2.14e-09!17;UBERON:0001045!4.25e-09!13;UBERON:0000956!4.71e-09!21;UBERON:0001869!4.71e-09!21;UBERON:0000203!4.71e-09!21;UBERON:0001264!6.27e-09!12;UBERON:0003922!6.27e-09!12;UBERON:0002114!6.27e-09!12;UBERON:0003923!6.27e-09!12;UBERON:0003924!6.27e-09!12;UBERON:0003921!6.27e-09!12;UBERON:0007811!8.29e-09!86;UBERON:0000153!2.20e-08!94;UBERON:0002021!1.60e-07!10;UBERON:0000411!1.60e-07!10;UBERON:0001950!1.60e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.02e-24,54;UBERON:0001049,2.52e-22,52;UBERON:0005068,2.52e-22,52;UBERON:0006241,2.52e-22,52;UBERON:0007135,2.52e-22,52;UBERON:0001017,2.00e-21,73;UBERON:0001016,2.52e-20,75;UBERON:0000955,4.00e-19,47;UBERON:0006238,4.00e-19,47;UBERON:0002616,2.23e-18,46;UBERON:0002020,8.09e-18,34;UBERON:0003080,3.40e-16,40;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0002346,9.26e-16,64;UBERON:0003075,9.26e-16,64;UBERON:0007284,9.26e-16,64;UBERON:0002780,1.85e-15,39;UBERON:0001890,1.85e-15,39;UBERON:0006240,1.85e-15,39;UBERON:0010371,1.02e-14,73;UBERON:0003528,1.24e-14,29;UBERON:0002791,1.24e-14,29;UBERON:0001893,1.24e-14,29;UBERON:0001264,5.88e-12,12;UBERON:0003056,1.13e-11,49;UBERON:0002619,1.19e-11,17;UBERON:0002021,5.60e-10,10;UBERON:0000411,5.60e-10,10;UBERON:0001950,5.60e-10,10;UBERON:0000956,8.97e-10,21;UBERON:0001869,8.97e-10,21;UBERON:0000203,8.97e-10,21;UBERON:0010314,2.50e-08,92;UBERON:0007023,6.37e-07,51;UBERON:0002075,7.71e-07,19;UBERON:0003076,7.81e-07,12;UBERON:0003057,7.81e-07,12 | |||
|phase1_expression=1.44133962394315,2.44282785347553,4.09499315450582,0,0,0.671517087647559,1.40167584357315,0,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0.42438965179803,3.656861476496,0,0,2.87986361028132,2.75291137280604,5.7423196411502,1.7230479846363,1.939241094173,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,1.74420125104357,2.41654801007919,3.30530828426282,1.1198913730029,2.87505128729943,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0,0.606949382578793,2.64495489636016,1.90149421051854,0,0,0.449949858640699,0,0,1.19840044207362,1.15265491596466,0.622137673850866,0.270011876663381,0.841299845405528,14.2825492201902,13.2521124570968,0.857435594504678,1.82106394934649,6.43453150627015,29.731287869835,16.0886045987337,15.9750794586493,2.90149833006426,2.47016637726506,4.16730696445408,18.7052609330925,25.3243174514256,27.350886352049,9.42811473515737,7.11858403995515,3.16879057903011,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,1.68533304158102,0,0,0,1.26759077799012,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,1.02765491747154,1.55362730188303,1.03909497345377,0.520455980298408,0,0.461230994512117,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0,0,0,1.86391761218122,5.85561594023094,6.91174132484402,5.36459815938042,0,1.19980546198682,0,18.8736205650077,26.992535566299,2.38743269014442,31.8098505951866,35.2887331115856,12.6750707181332,26.76980840618,0.305518091550949,10.5745925018579,55.0935613385411,0.631325567659422,0.130120442962704,0.459804208866946,0,0.753524089178575,0.272145996605311,0,0.187403449119458,1.03481348295606,0,0.378212160335639,1.75951124163949,1.31517439456545,0.556094498451196,0.348252166522167,0,0.995171334092466,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0.402619256281115,32.8052319760039,2.6755199218614,3.63460661282178,0,0.426576501070468,0.232236671860439,1.67527699718721,1.21010114774006,1.77902435075896,1.14135375667535,2.37264530772256,1.15289268306808,0.502670417600539,1.39269530428806,4.09424582950152,5.39291645192533,0,1.59313018603494,0.379335801906163,0.342745537829186,0,0,0.969762435838129,0.701358198903186,0.442655759869801,0.442830443938806,0,0.246794327843601,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,1.11642284300551,0,0,0.358794827043824,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.578596234326046,0,0,2.45882136509518,1.10374698521893,9.47248480927973,11.6039569726281,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,17.9939937196212,0.283880170416537,0.35613120733451,0,0.494910368917606,94.2490482213736,5.09839335925461,12.6975893925195,39.2298565892268,56.1073596473468,45.1929667477573,28.4271122485043,37.0804404067056,33.8672509465485,67.9479029562004,87.497445117249,99.0101215182594,4.76615448055303,0,0.388076051348264,1.07168517515796,0.709360934569094,1.24858172321449,1.81003922662333,2.13125464380219,0.704015124191131,1.48282449604674,9.48272111636336,0,0.322928853391811,0.422190474497091,0.238744688006273,0.164140899745061,3.49777003955821,8.52956389248344,0.683483523191411,2.68302928352189,0.185194527369712,0.188368457004691,0.27338845544205,0,0.339956859987711,0.419854356970974,0.138199973804424,7.63736494412091,0.158167996790568,1.21991680276109,1.29606408986162,0,1.09181281873089,0.944050424693745,0.661227645802687,0,0.648074866458964,16.776161453347,0,0.448549638131936,0.165458490457098,0.388902376688095,0.645799117388655,1.35164900392623,0.117357238645754,0.13020438484395,2.83120229949419,0.483168241652012,0.864090018773596,0.316011120628178,0,0.205421914329655,0.649604114888975,0.716106782669926,0.39736270956253,0.120195449519969,0.590758108698309,0.302899349844443,0.381034033274999,0.806609481094724,0.682205165178267,0.481059208201647,0.467507608726276,1.13365191807606,1.33191572024439,0.897138566094757,0.839423081820392,0.386379188064381,0.93841237725591,0.549454872801795,0,7.02200945649509,20.8958181768315,22.0956113523445,20.0513429703789,17.8727309637435,36.309373547844,44.5682399459923,43.2014400148356,51.7869383707854,43.9548136714678,40.9030646283938,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0,0.735374033800057,1.33348036680969,0.412070114477788,0.962757628775446,0.505394423527595,0.50695859978048,0.943131706930381,0.37456602987953,0.512201219238954,0.459483751644906,2.85776214769844,0.811190281613988,0.77163688185482,0,0.883193520806384,0.685738504770831,1.24233064311536,0,0.436039249896986,0.470546902076653,0.846146078916765,0.73171189149109,0.526139422875686,0.814824683075171,0,0.711810108745045,0.689531376628944,1.22769312950907,0.619747364743864,0.771626443924566,1.49886346762768,0.935726433781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| |||
|short_description=p1@Rab26 | |||
}} |
Revision as of 13:42, 13 September 2013
Short description: | p1@Rab26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab26_5end |
Coexpression cluster: | MCL_coexpression_mm9:414 |
Association with transcript: | 14bp_to_ENSMUST00000035797, ENSMUST00000061764, NM_177375, uc008awu.2_5end |
EntrezGene: | Rab26 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.26e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.26e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.