FFCP PHASE1:Mm9::chr17:35399790..35399799,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:35399790..35399799,-|id=chr17:35399790..35399799,-|ontology_enrichment_celltype=CL:0000624!1.50e-14!8;CL:0000063!5.61e-14!66;CL:0000893!1.39e-13!6;CL:0002489!1.39e-13!6;CL:0000898!1.39e-13!6;CL:0000809!1.39e-13!6;CL:0000810!1.39e-13!6;CL:0000895!1.39e-13!6;CL:0000808!1.39e-13!6;CL:0000894!1.39e-13!6;CL:0000806!1.39e-13!6;CL:0000807!1.39e-13!6;CL:0000805!1.39e-13!6;CL:0002425!1.39e-13!6;CL:0002436!1.39e-13!6;CL:0002427!1.39e-13!6;CL:0002428!1.39e-13!6;CL:0002429!1.39e-13!6;CL:0002433!1.39e-13!6;CL:0002431!1.39e-13!6;CL:0002432!1.39e-13!6;CL:0000791!7.26e-13!9;CL:0000789!7.26e-13!9;CL:0002420!7.26e-13!9;CL:0002419!7.26e-13!9;CL:0000790!7.26e-13!9;CL:0000838!1.14e-12!12;CL:0000988!1.83e-12!32;CL:0002032!1.83e-12!32;CL:0000037!1.83e-12!32;CL:0000566!1.83e-12!32;CL:0000837!1.83e-12!32;CL:0000542!1.26e-11!13;CL:0000051!1.26e-11!13;CL:0000738!1.94e-11!17;CL:0002087!1.94e-11!17;CL:0000084!2.05e-10!11;CL:0000827!2.05e-10!11;CL:0000144!7.29e-10!121;CL:0000012!7.29e-10!121;CL:0002320!1.38e-09!46;CL:0000134!1.38e-09!46;CL:0002031!3.30e-09!25;CL:0000034!1.90e-08!97;CL:0000219!8.66e-08!54;CL:0002371!4.94e-07!118|ontology_enrichment_celltype_v019_2=CL:0000213,1.16e-18,1;CL:0002078,1.16e-18,1;CL:0000115,1.16e-18,1;CL:0002262,1.16e-18,1;CL:1000398,1.16e-18,1;CL:0000815,1.74e-18,1;CL:0000792,1.74e-18,1;CL:0002476,4.13e-10,2;CL:0000738,5.72e-10,17;CL:0002087,5.72e-10,17;CL:0000624,1.32e-09,8;CL:0000791,1.20e-08,9;CL:0000789,1.20e-08,9;CL:0002420,1.20e-08,9;CL:0002419,1.20e-08,9;CL:0000790,1.20e-08,9;CL:0000084,3.00e-07,11;CL:0000827,3.00e-07,11;CL:0000215,4.17e-07,3;CL:0002031,5.13e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.38e-09!46|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.16e-18,1;UBERON:0001281,1.16e-18,1;UBERON:0000353,1.16e-18,1;UBERON:0003497,1.16e-18,1;UBERON:0003909,1.16e-18,1;UBERON:0003928,1.16e-18,1;UBERON:0003835,1.16e-18,1;UBERON:0003513,1.16e-18,1;UBERON:0001280,1.16e-18,1;UBERON:0004647,1.16e-18,1;UBERON:0002294,1.16e-18,1;UBERON:0001173,1.16e-18,1;UBERON:0004912,1.16e-18,1;UBERON:0005171,1.16e-18,1|phase1_expression=0,0,0,0,0,0.16787927191189,0,1.16210991097419,0.703943610758334,0.936258105287974,0,0.159544317990673,0.171200729931206,1.04904482902797,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0.498703936075477,0.408338712524738,0.418531630736908,0,0,9.41170380849623,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:35399790..35399799,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:35399790..35399799,- | |||
|id=chr17:35399790..35399799,- | |||
|ontology_enrichment_celltype=CL:0000624!1.50e-14!8;CL:0000063!5.61e-14!66;CL:0000893!1.39e-13!6;CL:0002489!1.39e-13!6;CL:0000898!1.39e-13!6;CL:0000809!1.39e-13!6;CL:0000810!1.39e-13!6;CL:0000895!1.39e-13!6;CL:0000808!1.39e-13!6;CL:0000894!1.39e-13!6;CL:0000806!1.39e-13!6;CL:0000807!1.39e-13!6;CL:0000805!1.39e-13!6;CL:0002425!1.39e-13!6;CL:0002436!1.39e-13!6;CL:0002427!1.39e-13!6;CL:0002428!1.39e-13!6;CL:0002429!1.39e-13!6;CL:0002433!1.39e-13!6;CL:0002431!1.39e-13!6;CL:0002432!1.39e-13!6;CL:0000791!7.26e-13!9;CL:0000789!7.26e-13!9;CL:0002420!7.26e-13!9;CL:0002419!7.26e-13!9;CL:0000790!7.26e-13!9;CL:0000838!1.14e-12!12;CL:0000988!1.83e-12!32;CL:0002032!1.83e-12!32;CL:0000037!1.83e-12!32;CL:0000566!1.83e-12!32;CL:0000837!1.83e-12!32;CL:0000542!1.26e-11!13;CL:0000051!1.26e-11!13;CL:0000738!1.94e-11!17;CL:0002087!1.94e-11!17;CL:0000084!2.05e-10!11;CL:0000827!2.05e-10!11;CL:0000144!7.29e-10!121;CL:0000012!7.29e-10!121;CL:0002320!1.38e-09!46;CL:0000134!1.38e-09!46;CL:0002031!3.30e-09!25;CL:0000034!1.90e-08!97;CL:0000219!8.66e-08!54;CL:0002371!4.94e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.16e-18,1;CL:0002078,1.16e-18,1;CL:0000115,1.16e-18,1;CL:0002262,1.16e-18,1;CL:1000398,1.16e-18,1;CL:0000815,1.74e-18,1;CL:0000792,1.74e-18,1;CL:0002476,4.13e-10,2;CL:0000738,5.72e-10,17;CL:0002087,5.72e-10,17;CL:0000624,1.32e-09,8;CL:0000791,1.20e-08,9;CL:0000789,1.20e-08,9;CL:0002420,1.20e-08,9;CL:0002419,1.20e-08,9;CL:0000790,1.20e-08,9;CL:0000084,3.00e-07,11;CL:0000827,3.00e-07,11;CL:0000215,4.17e-07,3;CL:0002031,5.13e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.38e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.16e-18,1;UBERON:0001281,1.16e-18,1;UBERON:0000353,1.16e-18,1;UBERON:0003497,1.16e-18,1;UBERON:0003909,1.16e-18,1;UBERON:0003928,1.16e-18,1;UBERON:0003835,1.16e-18,1;UBERON:0003513,1.16e-18,1;UBERON:0001280,1.16e-18,1;UBERON:0004647,1.16e-18,1;UBERON:0002294,1.16e-18,1;UBERON:0001173,1.16e-18,1;UBERON:0004912,1.16e-18,1;UBERON:0005171,1.16e-18,1 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,1.16210991097419,0.703943610758334,0.936258105287974,0,0.159544317990673,0.171200729931206,1.04904482902797,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0.498703936075477,0.408338712524738,0.418531630736908,0,0,9.41170380849623,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:35399790..35399799,- | |||
}} |
Revision as of 14:23, 13 September 2013
Short description: | p@chr17:35399790..35399799, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:35399790..35399799, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.16e-18 | 1 |
meso-epithelial cell | 1.16e-18 | 1 |
endothelial cell | 1.16e-18 | 1 |
endothelial cell of sinusoid | 1.16e-18 | 1 |
endothelial cell of hepatic sinusoid | 1.16e-18 | 1 |
regulatory T cell | 1.74e-18 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.74e-18 | 1 |
bone marrow macrophage | 4.13e-10 | 2 |
leukocyte | 5.72e-10 | 17 |
nongranular leukocyte | 5.72e-10 | 17 |
CD4-positive, alpha-beta T cell | 1.32e-09 | 8 |
mature alpha-beta T cell | 1.20e-08 | 9 |
alpha-beta T cell | 1.20e-08 | 9 |
immature T cell | 1.20e-08 | 9 |
mature T cell | 1.20e-08 | 9 |
immature alpha-beta T cell | 1.20e-08 | 9 |
T cell | 3.00e-07 | 11 |
pro-T cell | 3.00e-07 | 11 |
barrier cell | 4.17e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 5.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.16e-18 | 1 |
hepatic sinusoid | 1.16e-18 | 1 |
parenchyma | 1.16e-18 | 1 |
abdomen blood vessel | 1.16e-18 | 1 |
sinusoid | 1.16e-18 | 1 |
digestive system duct | 1.16e-18 | 1 |
abdominal segment blood vessel | 1.16e-18 | 1 |
trunk blood vessel | 1.16e-18 | 1 |
liver parenchyma | 1.16e-18 | 1 |
liver lobule | 1.16e-18 | 1 |
biliary system | 1.16e-18 | 1 |
biliary tree | 1.16e-18 | 1 |
biliary bud | 1.16e-18 | 1 |
hepatic duct | 1.16e-18 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.