FFCP PHASE1:Mm9::chr17:44090189..44090225,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53901|HGNC=|MCL_coexpression_id=20|UniProt=Q9JHG2,Q543P2|association_with_transcript=49bp_to_ENSMUST00000044792,NM_030598,uc008cpq.1_5end|description=CAGE_peak_1_at_Rcan2_5end|id=chr17:44090189..44090225,+|ontology_enrichment_celltype=CL:0000221!4.82e-14!44;CL:0000133!4.82e-14!44;CL:0002319!8.87e-14!43;CL:0000055!1.16e-11!50;CL:0000117!1.97e-11!23;CL:0000337!1.97e-11!23;CL:0000540!4.70e-11!33;CL:0000047!4.70e-11!33;CL:0000031!4.70e-11!33;CL:0000404!4.70e-11!33;CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.73e-15,44;CL:0000133,3.73e-15,44;CL:0002319,7.54e-15,43;CL:0000117,5.82e-13,23;CL:0000337,5.82e-13,23;CL:0000540,1.04e-11,33;CL:0000047,1.04e-11,33;CL:0000031,1.04e-11,33;CL:0000404,1.04e-11,33;CL:0000393,5.91e-10,39;CL:0000211,5.91e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.80e-29!75;UBERON:0001016!7.80e-29!75;UBERON:0001017!3.05e-28!73;UBERON:0005743!3.05e-28!73;UBERON:0004121!3.61e-28!102;UBERON:0000924!3.61e-28!102;UBERON:0006601!3.61e-28!102;UBERON:0002346!3.99e-25!71;UBERON:0003075!3.99e-25!71;UBERON:0007284!3.99e-25!71;UBERON:0000033!1.90e-23!63;UBERON:0001049!4.75e-22!52;UBERON:0005068!4.75e-22!52;UBERON:0006241!4.75e-22!52;UBERON:0007135!4.75e-22!52;UBERON:0000955!5.36e-21!50;UBERON:0006238!5.36e-21!50;UBERON:0002616!2.09e-20!49;UBERON:0003056!7.09e-18!49;UBERON:0002020!6.75e-17!34;UBERON:0003080!5.20e-15!40;UBERON:0002780!2.53e-14!39;UBERON:0001890!2.53e-14!39;UBERON:0006240!2.53e-14!39;UBERON:0002791!5.76e-14!29;UBERON:0003528!5.76e-14!29;UBERON:0001893!5.76e-14!29;UBERON:0000153!5.02e-10!94;UBERON:0007811!7.53e-10!86;UBERON:0000956!1.97e-09!21;UBERON:0001869!1.97e-09!21;UBERON:0000203!1.97e-09!21;UBERON:0002619!1.14e-08!17;UBERON:0000468!4.85e-08!333;UBERON:0003076!6.76e-08!12;UBERON:0003057!6.76e-08!12;UBERON:0002021!2.23e-07!10;UBERON:0000411!2.23e-07!10;UBERON:0001950!2.23e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-31,75;UBERON:0001017,6.59e-31,73;UBERON:0004121,3.14e-29,95;UBERON:0000924,3.14e-29,95;UBERON:0006601,3.14e-29,95;UBERON:0002346,9.15e-27,64;UBERON:0003075,9.15e-27,64;UBERON:0007284,9.15e-27,64;UBERON:0000073,2.02e-26,54;UBERON:0001049,1.02e-24,52;UBERON:0005068,1.02e-24,52;UBERON:0006241,1.02e-24,52;UBERON:0007135,1.02e-24,52;UBERON:0010314,8.97e-23,92;UBERON:0010371,6.01e-22,73;UBERON:0000955,5.34e-21,47;UBERON:0006238,5.34e-21,47;UBERON:0002616,2.46e-20,46;UBERON:0003056,6.20e-20,49;UBERON:0002020,2.82e-19,34;UBERON:0003080,1.26e-16,40;UBERON:0003528,6.89e-16,29;UBERON:0002791,6.89e-16,29;UBERON:0001893,6.89e-16,29;UBERON:0002780,7.71e-16,39;UBERON:0001890,7.71e-16,39;UBERON:0006240,7.71e-16,39;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0002619,8.99e-10,17;UBERON:0003076,7.01e-09,12;UBERON:0003057,7.01e-09,12;UBERON:0002021,2.78e-08,10;UBERON:0000411,2.78e-08,10;UBERON:0001950,2.78e-08,10|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,18.28430738248,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,2.93993100536592,3.30384153891027,5.47673941043627,24.2007923582296,5.27246838562732,3.4997381833371,7.55926676776958,5.75010257459886,0,0,0,0.257259436035947,0.286533439938757,0,44.3073049282519,58.1890077199236,43.1005354384202,0,0,0.449949858640699,0.988866362566974,0.7104801149461,9.28760342607055,5.37905627450176,2.28117147078651,4.86021377994086,3.57552434297349,64.5571224752596,53.4501869102905,5.75706756310284,4.40889166683887,2.75765635983006,281.896655358435,159.609172606485,161.747679518824,46.0283144178377,43.6396059983494,39.5894161623138,172.535093382853,125.496062037065,121.16901048701,86.915432714732,85.4230084794618,68.5949960637106,1.96888102666279,28.1126203597242,0,0,0,0.539703191637817,0,0,6.46044332606059,0.170430322578058,0,0,5.63373679106722,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0.742210695324124,3.12273588179045,6.39377504455497,5.5347719341454,5.12456977878917,3.17489509266403,0.376999773989026,0,0.578397427679647,0.884610551949874,1.61766849947409,3.97514733228708,1.93950101254089,1.86391761218122,60.6056249813903,51.7333365829234,0,0,0,0,204.464222787583,146.857693504779,10.6806199295935,107.423429878827,78.2489299430811,158.750066043504,103.347684574162,0.611036183101898,3.23458123586242,0,16.414464759145,1.30120442962704,2.29902104433473,3.96136685571768,8.74087943447147,12.3826428455417,17.6796933993093,13.5867500611607,28.9747775227698,0.646703978798527,1.51284864134255,2.28736461413134,1.31517439456545,0.834141747676794,2.089512999133,2.88094990971121,0.398068533636986,0,0,0,2.27838349789052,1.87620847984877,3.78130329068131,4.26140524053378,3.34499193970586,3.85667782218446,1.62773761325285,1.87791380979733,1.5179494507732,0.822799249567402,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,1.34206418760372,67.2927835405207,18.7286394530298,0,0,0.639864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| ||
|EntrezGene=53901 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q9JHG2,Q543P2 | |||
|association_with_transcript=49bp_to_ENSMUST00000044792,NM_030598,uc008cpq.1_5end | |||
|description=CAGE_peak_1_at_Rcan2_5end | |||
|id=chr17:44090189..44090225,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.82e-14!44;CL:0000133!4.82e-14!44;CL:0002319!8.87e-14!43;CL:0000055!1.16e-11!50;CL:0000117!1.97e-11!23;CL:0000337!1.97e-11!23;CL:0000540!4.70e-11!33;CL:0000047!4.70e-11!33;CL:0000031!4.70e-11!33;CL:0000404!4.70e-11!33;CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.73e-15,44;CL:0000133,3.73e-15,44;CL:0002319,7.54e-15,43;CL:0000117,5.82e-13,23;CL:0000337,5.82e-13,23;CL:0000540,1.04e-11,33;CL:0000047,1.04e-11,33;CL:0000031,1.04e-11,33;CL:0000404,1.04e-11,33;CL:0000393,5.91e-10,39;CL:0000211,5.91e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.80e-29!75;UBERON:0001016!7.80e-29!75;UBERON:0001017!3.05e-28!73;UBERON:0005743!3.05e-28!73;UBERON:0004121!3.61e-28!102;UBERON:0000924!3.61e-28!102;UBERON:0006601!3.61e-28!102;UBERON:0002346!3.99e-25!71;UBERON:0003075!3.99e-25!71;UBERON:0007284!3.99e-25!71;UBERON:0000033!1.90e-23!63;UBERON:0001049!4.75e-22!52;UBERON:0005068!4.75e-22!52;UBERON:0006241!4.75e-22!52;UBERON:0007135!4.75e-22!52;UBERON:0000955!5.36e-21!50;UBERON:0006238!5.36e-21!50;UBERON:0002616!2.09e-20!49;UBERON:0003056!7.09e-18!49;UBERON:0002020!6.75e-17!34;UBERON:0003080!5.20e-15!40;UBERON:0002780!2.53e-14!39;UBERON:0001890!2.53e-14!39;UBERON:0006240!2.53e-14!39;UBERON:0002791!5.76e-14!29;UBERON:0003528!5.76e-14!29;UBERON:0001893!5.76e-14!29;UBERON:0000153!5.02e-10!94;UBERON:0007811!7.53e-10!86;UBERON:0000956!1.97e-09!21;UBERON:0001869!1.97e-09!21;UBERON:0000203!1.97e-09!21;UBERON:0002619!1.14e-08!17;UBERON:0000468!4.85e-08!333;UBERON:0003076!6.76e-08!12;UBERON:0003057!6.76e-08!12;UBERON:0002021!2.23e-07!10;UBERON:0000411!2.23e-07!10;UBERON:0001950!2.23e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-31,75;UBERON:0001017,6.59e-31,73;UBERON:0004121,3.14e-29,95;UBERON:0000924,3.14e-29,95;UBERON:0006601,3.14e-29,95;UBERON:0002346,9.15e-27,64;UBERON:0003075,9.15e-27,64;UBERON:0007284,9.15e-27,64;UBERON:0000073,2.02e-26,54;UBERON:0001049,1.02e-24,52;UBERON:0005068,1.02e-24,52;UBERON:0006241,1.02e-24,52;UBERON:0007135,1.02e-24,52;UBERON:0010314,8.97e-23,92;UBERON:0010371,6.01e-22,73;UBERON:0000955,5.34e-21,47;UBERON:0006238,5.34e-21,47;UBERON:0002616,2.46e-20,46;UBERON:0003056,6.20e-20,49;UBERON:0002020,2.82e-19,34;UBERON:0003080,1.26e-16,40;UBERON:0003528,6.89e-16,29;UBERON:0002791,6.89e-16,29;UBERON:0001893,6.89e-16,29;UBERON:0002780,7.71e-16,39;UBERON:0001890,7.71e-16,39;UBERON:0006240,7.71e-16,39;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0002619,8.99e-10,17;UBERON:0003076,7.01e-09,12;UBERON:0003057,7.01e-09,12;UBERON:0002021,2.78e-08,10;UBERON:0000411,2.78e-08,10;UBERON:0001950,2.78e-08,10 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,18.28430738248,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,2.93993100536592,3.30384153891027,5.47673941043627,24.2007923582296,5.27246838562732,3.4997381833371,7.55926676776958,5.75010257459886,0,0,0,0.257259436035947,0.286533439938757,0,44.3073049282519,58.1890077199236,43.1005354384202,0,0,0.449949858640699,0.988866362566974,0.7104801149461,9.28760342607055,5.37905627450176,2.28117147078651,4.86021377994086,3.57552434297349,64.5571224752596,53.4501869102905,5.75706756310284,4.40889166683887,2.75765635983006,281.896655358435,159.609172606485,161.747679518824,46.0283144178377,43.6396059983494,39.5894161623138,172.535093382853,125.496062037065,121.16901048701,86.915432714732,85.4230084794618,68.5949960637106,1.96888102666279,28.1126203597242,0,0,0,0.539703191637817,0,0,6.46044332606059,0.170430322578058,0,0,5.63373679106722,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0.742210695324124,3.12273588179045,6.39377504455497,5.5347719341454,5.12456977878917,3.17489509266403,0.376999773989026,0,0.578397427679647,0.884610551949874,1.61766849947409,3.97514733228708,1.93950101254089,1.86391761218122,60.6056249813903,51.7333365829234,0,0,0,0,204.464222787583,146.857693504779,10.6806199295935,107.423429878827,78.2489299430811,158.750066043504,103.347684574162,0.611036183101898,3.23458123586242,0,16.414464759145,1.30120442962704,2.29902104433473,3.96136685571768,8.74087943447147,12.3826428455417,17.6796933993093,13.5867500611607,28.9747775227698,0.646703978798527,1.51284864134255,2.28736461413134,1.31517439456545,0.834141747676794,2.089512999133,2.88094990971121,0.398068533636986,0,0,0,2.27838349789052,1.87620847984877,3.78130329068131,4.26140524053378,3.34499193970586,3.85667782218446,1.62773761325285,1.87791380979733,1.5179494507732,0.822799249567402,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,1.34206418760372,67.2927835405207,18.7286394530298,0,0,0.639864751605702,0.696710015581316,0.644337306610467,0.403367049246685,1.33426826306922,0.190225626112559,0.474529061544512,0.164698954724011,1.00534083520108,0.397912944082302,0.19496408711912,0,0.648414149624083,0.796565093017469,0.189667900953082,1.14248512609729,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,1.70542270593436,1.14075483509418,0.509235257325564,0,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,3.01582567878545,0.54390568381871,0,0,237.293772001957,193.282071190543,35.0820783106085,3.02965112645248,0.631016438832513,0.390438744296638,4.52389135238878,2.15071918157297,3.34198011123591,3.96307143104365,2.83367491172426,2.04579100537918,2.76701444562566,61.0510501201433,2.12910127812403,0.35613120733451,0.488660878060728,2.63952196756057,0,0.485561272309963,0,0.565815239267694,1.18120757152309,0.614870295887855,1.29214146584111,0.363533729477506,0.712994756769443,1.26414703174326,0,0,6.80879211507576,1.26042765821917,1.03486947026204,1.28602221018955,0.532020700926821,1.07021290561242,1.81003922662333,2.13125464380219,0,0,0.220528398054962,0.16488625294148,0.807322133479528,0.422190474497091,0.358117032009409,0.164140899745061,0,258.29744570064,0.170870880797853,0.412773735926445,1.11116716421827,0.376736914009382,0,0,0,0,0,0,0.632671987162271,1.62655573701479,0.972048067396211,1.04544148007234,0.655087691238533,1.21377911746339,0.743881101528023,1.04702376793612,1.29614973291793,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,2.0405734525369,0,0.0897138566094757,0.167884616364078,1.15913756419314,0.375364950902364,0.36630324853453,0,1.00314420807073,79.6300098090064,84.2395182808134,80.2053718815155,66.6790347493508,95.9115527678899,104.244357839779,81.6777225280485,103.123555538346,104.222754066367,109.765186091386,4.4628559461196,7.58147259461959,10.9269507682646,8.0225216632537,13.2056292455629,8.64064489715066,5.55616819504038,8.85950746127245,7.38114182061175,6.57012750585873,8.11133759648767,5.47016390019621,3.93294331373506,5.8262888688431,6.31790158511746,5.23923060411381,5.91010062318763,5.98018583437486,5.76920261124629,7.80154276712306,7.54312355247914,5.32427418478012,6.91464950847231,8.1393993314104,6.96409415073447,7.1922416707925,5.48783918618318,7.89209134313529,7.19761803383067,6.17256498823512,5.57584585183618,5.1222330835293,6.95692773388472,5.57772628269478,5.98010494041538,12.2407183189594,7.48581147025307,5.58664740525576,4.3996316375834,3.97064554415128,7.18790290423307 | |||
|short_description=p1@Rcan2 | |||
}} |
Revision as of 14:34, 13 September 2013
Short description: | p1@Rcan2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rcan2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 49bp_to_ENSMUST00000044792, NM_030598, uc008cpq.1_5end |
EntrezGene: | Rcan2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.73e-15 | 44 |
neurectodermal cell | 3.73e-15 | 44 |
neural cell | 7.54e-15 | 43 |
CNS neuron (sensu Vertebrata) | 5.82e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.82e-13 | 23 |
neuron | 1.04e-11 | 33 |
neuronal stem cell | 1.04e-11 | 33 |
neuroblast | 1.04e-11 | 33 |
electrically signaling cell | 1.04e-11 | 33 |
electrically responsive cell | 5.91e-10 | 39 |
electrically active cell | 5.91e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.