FFCP PHASE1:Mm9::chr17:66699008..66699012,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1403|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:66699008..66699012,-|id=chr17:66699008..66699012,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.51e-11!71;UBERON:0003075!9.51e-11!71;UBERON:0007284!9.51e-11!71;UBERON:0003056!6.54e-09!49;UBERON:0000033!1.56e-08!63|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.05e-14,10;UBERON:0000411,4.05e-14,10;UBERON:0001950,4.05e-14,10;UBERON:0002346,1.12e-09,64;UBERON:0003075,1.12e-09,64;UBERON:0007284,1.12e-09,64;UBERON:0003056,1.92e-09,49;UBERON:0002616,1.14e-08,46;UBERON:0000956,1.71e-08,21;UBERON:0001869,1.71e-08,21;UBERON:0000203,1.71e-08,21;UBERON:0000955,1.92e-08,47;UBERON:0006238,1.92e-08,47;UBERON:0010371,3.62e-08,73;UBERON:0002619,4.46e-08,17;UBERON:0001049,1.89e-07,52;UBERON:0005068,1.89e-07,52;UBERON:0006241,1.89e-07,52;UBERON:0007135,1.89e-07,52;UBERON:0000073,4.19e-07,54;UBERON:0002780,7.99e-07,39;UBERON:0001890,7.99e-07,39;UBERON:0006240,7.99e-07,39;UBERON:0002048,9.60e-07,14;UBERON:0000117,9.60e-07,14;UBERON:0000171,9.60e-07,14;UBERON:0000170,9.60e-07,14;UBERON:0005597,9.60e-07,14;UBERON:0000118,9.60e-07,14|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0.220868540951614,0.367472397644862,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.823120949949934,0,0.494389935468748,0,0,0.323533699894818,0.220841518460394,0,0,4.39171195517321,3.97948742945565,0,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0.125654352112864,1.04294592115366,0.767146371990992,0.20778804455956,1.1356888414743,0.203678727700633,0,0.252722758433675,1.05220927943237,0.650602214813519,0.689706313300419,0.540186389416048,0.452114453507145,1.15662048557257,0.896796041993948,0.562210347358373,3.10444044886819,0,0,0,0,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0.205809224758569,0,0,2.13288250535234,0,0.515469845288373,0.201683524623343,0,0,0.474529061544512,0.494096864172033,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.350679099451593,0.379419222745544,0.885660887877613,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,1.17080188714679,0.630540576424764,1.10732344824387,0.478364305972461,1.63863314715738,0.518054945597687,1.88043776155965,0,0,0,0,0.321101179975584,0.468846746368813,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,0,0.642642632843614,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0,0.540183282093931,0.258717367565509,1.28602221018955,0.886701168211368,0.713475270408282,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0,0,0.556275906031529,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.216010681643603,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.129159823477731,1.01373675294467,0.58678619322877,0.39061315453185,1.25831213310853,0.241584120826006,0.864090018773596,0,0.608175645870493,0.308132871494482,0.51968329191118,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0,0,0,0.62799699626633,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,1.00314420807073,2.25900737046827,0.920650473014354,0.572895513439397,1.71853182343688,1.37016503954128,1.5107877947794,0,1.80128481289688,1.35942722695261,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.231768651889711,0,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0,0.581385666529314,0.470546902076653,0.676916863133412,0.914639864363863,0.263069711437843,0.271608227691724,0,0.118635018124174,0.394017929502254,0.40923104316968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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1403 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:66699008..66699012,- | |||
|id=chr17:66699008..66699012,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.51e-11!71;UBERON:0003075!9.51e-11!71;UBERON:0007284!9.51e-11!71;UBERON:0003056!6.54e-09!49;UBERON:0000033!1.56e-08!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.05e-14,10;UBERON:0000411,4.05e-14,10;UBERON:0001950,4.05e-14,10;UBERON:0002346,1.12e-09,64;UBERON:0003075,1.12e-09,64;UBERON:0007284,1.12e-09,64;UBERON:0003056,1.92e-09,49;UBERON:0002616,1.14e-08,46;UBERON:0000956,1.71e-08,21;UBERON:0001869,1.71e-08,21;UBERON:0000203,1.71e-08,21;UBERON:0000955,1.92e-08,47;UBERON:0006238,1.92e-08,47;UBERON:0010371,3.62e-08,73;UBERON:0002619,4.46e-08,17;UBERON:0001049,1.89e-07,52;UBERON:0005068,1.89e-07,52;UBERON:0006241,1.89e-07,52;UBERON:0007135,1.89e-07,52;UBERON:0000073,4.19e-07,54;UBERON:0002780,7.99e-07,39;UBERON:0001890,7.99e-07,39;UBERON:0006240,7.99e-07,39;UBERON:0002048,9.60e-07,14;UBERON:0000117,9.60e-07,14;UBERON:0000171,9.60e-07,14;UBERON:0000170,9.60e-07,14;UBERON:0005597,9.60e-07,14;UBERON:0000118,9.60e-07,14 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0.220868540951614,0.367472397644862,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.823120949949934,0,0.494389935468748,0,0,0.323533699894818,0.220841518460394,0,0,4.39171195517321,3.97948742945565,0,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0.125654352112864,1.04294592115366,0.767146371990992,0.20778804455956,1.1356888414743,0.203678727700633,0,0.252722758433675,1.05220927943237,0.650602214813519,0.689706313300419,0.540186389416048,0.452114453507145,1.15662048557257,0.896796041993948,0.562210347358373,3.10444044886819,0,0,0,0,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0.210289948564127,0.205809224758569,0,0,2.13288250535234,0,0.515469845288373,0.201683524623343,0,0,0.474529061544512,0.494096864172033,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0.610953983535943,0.387904974335251,0.350679099451593,0.379419222745544,0.885660887877613,0.627994911365499,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,1.17080188714679,0.630540576424764,1.10732344824387,0.478364305972461,1.63863314715738,0.518054945597687,1.88043776155965,0,0,0,0,0.321101179975584,0.468846746368813,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,0,0.642642632843614,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0,0.540183282093931,0.258717367565509,1.28602221018955,0.886701168211368,0.713475270408282,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0,0,0.556275906031529,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.216010681643603,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.129159823477731,1.01373675294467,0.58678619322877,0.39061315453185,1.25831213310853,0.241584120826006,0.864090018773596,0,0.608175645870493,0.308132871494482,0.51968329191118,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0,0,0,0.62799699626633,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,1.00314420807073,2.25900737046827,0.920650473014354,0.572895513439397,1.71853182343688,1.37016503954128,1.5107877947794,0,1.80128481289688,1.35942722695261,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.231768651889711,0,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0,0.581385666529314,0.470546902076653,0.676916863133412,0.914639864363863,0.263069711437843,0.271608227691724,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0,0.499621155875892,0.701794825336225,0,0,0,0.231867835620421 | |||
|short_description=p@chr17:66699008..66699012,- | |||
}} |
Revision as of 15:08, 13 September 2013
Short description: | p@chr17:66699008..66699012, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:66699008..66699012, - |
Coexpression cluster: | MCL_coexpression_mm9:1403 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.05e-14 | 10 |
visual cortex | 4.05e-14 | 10 |
neocortex | 4.05e-14 | 10 |
neurectoderm | 1.12e-09 | 64 |
neural plate | 1.12e-09 | 64 |
presumptive neural plate | 1.12e-09 | 64 |
pre-chordal neural plate | 1.92e-09 | 49 |
regional part of brain | 1.14e-08 | 46 |
cerebral cortex | 1.71e-08 | 21 |
cerebral hemisphere | 1.71e-08 | 21 |
pallium | 1.71e-08 | 21 |
brain | 1.92e-08 | 47 |
future brain | 1.92e-08 | 47 |
ecto-epithelium | 3.62e-08 | 73 |
regional part of cerebral cortex | 4.46e-08 | 17 |
neural tube | 1.89e-07 | 52 |
neural rod | 1.89e-07 | 52 |
future spinal cord | 1.89e-07 | 52 |
neural keel | 1.89e-07 | 52 |
regional part of nervous system | 4.19e-07 | 54 |
regional part of forebrain | 7.99e-07 | 39 |
forebrain | 7.99e-07 | 39 |
future forebrain | 7.99e-07 | 39 |
lung | 9.60e-07 | 14 |
respiratory tube | 9.60e-07 | 14 |
respiration organ | 9.60e-07 | 14 |
pair of lungs | 9.60e-07 | 14 |
lung primordium | 9.60e-07 | 14 |
lung bud | 9.60e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.