FFCP PHASE1:Mm9::chr18:35931228..35931253,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56550|HGNC=|MCL_coexpression_id=484|UniProt=P62838|association_with_transcript=-2bp_to_ENSMUST00000167406_5end|description=CAGE_peak_4_at_Ube2d2_5end|id=chr18:35931228..35931253,+|ontology_enrichment_celltype=CL:0000063!1.89e-26!66;CL:0000144!7.77e-16!121;CL:0000012!7.77e-16!121;CL:0002371!2.56e-14!118;CL:0000988!1.41e-13!32;CL:0002032!1.41e-13!32;CL:0000037!1.41e-13!32;CL:0000566!1.41e-13!32;CL:0000837!1.41e-13!32;CL:0000548!5.91e-13!115;CL:0000004!5.91e-13!115;CL:0000255!5.91e-13!115;CL:0002320!2.28e-12!46;CL:0000134!2.28e-12!46;CL:0002031!2.61e-12!25;CL:0000066!3.00e-12!25;CL:0002076!3.31e-12!15;CL:0000219!1.13e-11!54;CL:0000838!3.75e-11!12;CL:0000084!3.16e-10!11;CL:0000827!3.16e-10!11;CL:0000542!6.11e-10!13;CL:0000051!6.11e-10!13;CL:0000738!1.67e-09!17;CL:0002087!1.67e-09!17;CL:0000791!2.01e-09!9;CL:0000789!2.01e-09!9;CL:0002420!2.01e-09!9;CL:0002419!2.01e-09!9;CL:0000790!2.01e-09!9;CL:0000223!4.08e-09!20;CL:0000624!1.76e-08!8;CL:0002563!6.92e-08!9;CL:0002251!6.92e-08!9;CL:0000034!2.44e-07!97;CL:0000075!7.23e-07!7|ontology_enrichment_celltype_v019_2=CL:0000988,2.07e-19,32;CL:0002032,2.07e-19,32;CL:0000037,2.07e-19,32;CL:0000837,2.07e-19,32;CL:0000066,2.57e-19,25;CL:0002031,1.75e-18,25;CL:0002076,4.57e-18,15;CL:0002320,6.25e-17,46;CL:0000134,6.25e-17,46;CL:0000219,7.86e-16,54;CL:0000838,7.34e-15,12;CL:0000223,2.18e-14,20;CL:0000791,9.46e-14,9;CL:0000789,9.46e-14,9;CL:0002420,9.46e-14,9;CL:0002419,9.46e-14,9;CL:0000790,9.46e-14,9;CL:0000738,1.54e-13,17;CL:0002087,1.54e-13,17;CL:0000542,1.79e-13,13;CL:0000051,1.79e-13,13;CL:0000084,1.92e-13,11;CL:0000827,1.92e-13,11;CL:0000034,2.86e-13,97;CL:0000624,2.71e-12,8;CL:0002563,2.26e-11,9;CL:0002251,2.26e-11,9;CL:0000075,8.46e-10,7;CL:0000893,1.66e-09,6;CL:0002489,1.66e-09,6;CL:0000898,1.66e-09,6;CL:0000809,1.66e-09,6;CL:0000810,1.66e-09,6;CL:0000895,1.66e-09,6;CL:0000808,1.66e-09,6;CL:0000894,1.66e-09,6;CL:0000806,1.66e-09,6;CL:0000807,1.66e-09,6;CL:0000805,1.66e-09,6;CL:0002425,1.66e-09,6;CL:0002436,1.66e-09,6;CL:0002427,1.66e-09,6;CL:0002428,1.66e-09,6;CL:0002429,1.66e-09,6;CL:0002433,1.66e-09,6;CL:0002431,1.66e-09,6;CL:0002432,1.66e-09,6;CL:0000723,3.66e-09,91;CL:0000048,3.66e-09,91;CL:0000239,4.36e-09,6;CL:0000677,4.36e-09,6;CL:0000584,4.36e-09,6;CL:0000049,5.10e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.28e-12!46;UBERON:0000344!1.11e-10!15;UBERON:0004923!5.85e-09!24;UBERON:0000485!6.87e-09!11;UBERON:0001242!7.33e-09!13;UBERON:0000060!7.33e-09!13;UBERON:0001262!7.33e-09!13;UBERON:0004786!7.33e-09!13;UBERON:0002193!5.20e-08!48;UBERON:0003350!6.92e-08!9;UBERON:0004808!6.92e-08!9;UBERON:0001277!6.92e-08!9;UBERON:0002390!3.93e-07!45;UBERON:0003061!3.93e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.25e-17,46;UBERON:0000344,4.84e-16,15;UBERON:0001242,3.27e-13,13;UBERON:0001262,3.27e-13,13;UBERON:0004786,3.27e-13,13;UBERON:0000485,6.35e-13,11;UBERON:0003350,2.26e-11,9;UBERON:0004808,2.26e-11,9;UBERON:0001277,2.26e-11,9;UBERON:0004923,1.29e-08,24|phase1_expression=4.00372117761985,12.563114675017,11.8299802241279,29.9439569193762,29.0519523368881,8.72972213941827,20.3242997318107,26.3411579820816,29.56563165185,43.3019373695688,17.4642327590015,19.9430397488341,11.641649635322,16.4350356547715,0,14.9831697868471,24.4846657344851,14.1957974411207,14.3970155286026,14.429248161133,0.0850432901510698,0.0992909512008853,18.5451850288644,27.0387194520857,21.7938817013812,11.4846392823004,14.6459078694085,10.7735616342945,18.0522248483555,6.80481350351813,8.86922042621219,8.25539875497521,0,0,2.02196133825892,5.15327400611326,3.87921776898501,3.34825304589526,3.1253413780952,1.0470474879476,1.17646297606203,2.73218193983378,2.42755176515577,0,0,0,0.782391344348039,0,0,0,0,0,23.9929126662563,19.5847778343063,25.5431287348273,0,0,0,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,13.4792624133068,11.1090193356975,10.4351215932604,21.5105969245347,0,0,0,0,0,0,10.1316541795119,12.7202246823722,3.23939865486365,7.69958864485907,5.09610479413291,7.11066703153331,17.7522653629196,18.4952701796822,20.7265022456061,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,4.91242010474273,5.39912457894067,4.44745794755726,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,5.91900186363845,0,0,0,0,0,0,0,0.232533944750408,0,0,0.329119699826961,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,19.6028669121054,10.8781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,5.43930975980337,4.05859211738608,3.31679937130617,0,0.316335993581135,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0.537080087002444,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,32.4099491926134,17.8530574652857,30.05134632917,0.19318959403219,0,0,0,0,0,0,0,7.73339320546594,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Ube2d2}} | ||
|EntrezGene=56550 | |||
|HGNC= | |||
|MCL_coexpression_id=484 | |||
|UniProt=P62838 | |||
|association_with_transcript=-2bp_to_ENSMUST00000167406_5end | |||
|description=CAGE_peak_4_at_Ube2d2_5end | |||
|id=chr18:35931228..35931253,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.89e-26!66;CL:0000144!7.77e-16!121;CL:0000012!7.77e-16!121;CL:0002371!2.56e-14!118;CL:0000988!1.41e-13!32;CL:0002032!1.41e-13!32;CL:0000037!1.41e-13!32;CL:0000566!1.41e-13!32;CL:0000837!1.41e-13!32;CL:0000548!5.91e-13!115;CL:0000004!5.91e-13!115;CL:0000255!5.91e-13!115;CL:0002320!2.28e-12!46;CL:0000134!2.28e-12!46;CL:0002031!2.61e-12!25;CL:0000066!3.00e-12!25;CL:0002076!3.31e-12!15;CL:0000219!1.13e-11!54;CL:0000838!3.75e-11!12;CL:0000084!3.16e-10!11;CL:0000827!3.16e-10!11;CL:0000542!6.11e-10!13;CL:0000051!6.11e-10!13;CL:0000738!1.67e-09!17;CL:0002087!1.67e-09!17;CL:0000791!2.01e-09!9;CL:0000789!2.01e-09!9;CL:0002420!2.01e-09!9;CL:0002419!2.01e-09!9;CL:0000790!2.01e-09!9;CL:0000223!4.08e-09!20;CL:0000624!1.76e-08!8;CL:0002563!6.92e-08!9;CL:0002251!6.92e-08!9;CL:0000034!2.44e-07!97;CL:0000075!7.23e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.07e-19,32;CL:0002032,2.07e-19,32;CL:0000037,2.07e-19,32;CL:0000837,2.07e-19,32;CL:0000066,2.57e-19,25;CL:0002031,1.75e-18,25;CL:0002076,4.57e-18,15;CL:0002320,6.25e-17,46;CL:0000134,6.25e-17,46;CL:0000219,7.86e-16,54;CL:0000838,7.34e-15,12;CL:0000223,2.18e-14,20;CL:0000791,9.46e-14,9;CL:0000789,9.46e-14,9;CL:0002420,9.46e-14,9;CL:0002419,9.46e-14,9;CL:0000790,9.46e-14,9;CL:0000738,1.54e-13,17;CL:0002087,1.54e-13,17;CL:0000542,1.79e-13,13;CL:0000051,1.79e-13,13;CL:0000084,1.92e-13,11;CL:0000827,1.92e-13,11;CL:0000034,2.86e-13,97;CL:0000624,2.71e-12,8;CL:0002563,2.26e-11,9;CL:0002251,2.26e-11,9;CL:0000075,8.46e-10,7;CL:0000893,1.66e-09,6;CL:0002489,1.66e-09,6;CL:0000898,1.66e-09,6;CL:0000809,1.66e-09,6;CL:0000810,1.66e-09,6;CL:0000895,1.66e-09,6;CL:0000808,1.66e-09,6;CL:0000894,1.66e-09,6;CL:0000806,1.66e-09,6;CL:0000807,1.66e-09,6;CL:0000805,1.66e-09,6;CL:0002425,1.66e-09,6;CL:0002436,1.66e-09,6;CL:0002427,1.66e-09,6;CL:0002428,1.66e-09,6;CL:0002429,1.66e-09,6;CL:0002433,1.66e-09,6;CL:0002431,1.66e-09,6;CL:0002432,1.66e-09,6;CL:0000723,3.66e-09,91;CL:0000048,3.66e-09,91;CL:0000239,4.36e-09,6;CL:0000677,4.36e-09,6;CL:0000584,4.36e-09,6;CL:0000049,5.10e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.28e-12!46;UBERON:0000344!1.11e-10!15;UBERON:0004923!5.85e-09!24;UBERON:0000485!6.87e-09!11;UBERON:0001242!7.33e-09!13;UBERON:0000060!7.33e-09!13;UBERON:0001262!7.33e-09!13;UBERON:0004786!7.33e-09!13;UBERON:0002193!5.20e-08!48;UBERON:0003350!6.92e-08!9;UBERON:0004808!6.92e-08!9;UBERON:0001277!6.92e-08!9;UBERON:0002390!3.93e-07!45;UBERON:0003061!3.93e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.25e-17,46;UBERON:0000344,4.84e-16,15;UBERON:0001242,3.27e-13,13;UBERON:0001262,3.27e-13,13;UBERON:0004786,3.27e-13,13;UBERON:0000485,6.35e-13,11;UBERON:0003350,2.26e-11,9;UBERON:0004808,2.26e-11,9;UBERON:0001277,2.26e-11,9;UBERON:0004923,1.29e-08,24 | |||
|phase1_expression=4.00372117761985,12.563114675017,11.8299802241279,29.9439569193762,29.0519523368881,8.72972213941827,20.3242997318107,26.3411579820816,29.56563165185,43.3019373695688,17.4642327590015,19.9430397488341,11.641649635322,16.4350356547715,0,14.9831697868471,24.4846657344851,14.1957974411207,14.3970155286026,14.429248161133,0.0850432901510698,0.0992909512008853,18.5451850288644,27.0387194520857,21.7938817013812,11.4846392823004,14.6459078694085,10.7735616342945,18.0522248483555,6.80481350351813,8.86922042621219,8.25539875497521,0,0,2.02196133825892,5.15327400611326,3.87921776898501,3.34825304589526,3.1253413780952,1.0470474879476,1.17646297606203,2.73218193983378,2.42755176515577,0,0,0,0.782391344348039,0,0,0,0,0,23.9929126662563,19.5847778343063,25.5431287348273,0,0,0,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,13.4792624133068,11.1090193356975,10.4351215932604,21.5105969245347,0,0,0,0,0,0,10.1316541795119,12.7202246823722,3.23939865486365,7.69958864485907,5.09610479413291,7.11066703153331,17.7522653629196,18.4952701796822,20.7265022456061,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,4.91242010474273,5.39912457894067,4.44745794755726,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,5.91900186363845,0,0,0,0,0,0,0,0.232533944750408,0,0,0.329119699826961,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,19.6028669121054,10.8781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,5.43930975980337,4.05859211738608,3.31679937130617,0,0.316335993581135,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0.537080087002444,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,32.4099491926134,17.8530574652857,30.05134632917,0.19318959403219,0,0,0,0,0,0,0,7.73339320546594,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Ube2d2 | |||
}} |
Revision as of 16:01, 13 September 2013
Short description: | p4@Ube2d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ube2d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:484 |
Association with transcript: | -2bp_to_ENSMUST00000167406_5end |
EntrezGene: | Ube2d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.25e-17 | 46 |
mucosa | 4.84e-16 | 15 |
intestinal mucosa | 3.27e-13 | 13 |
wall of intestine | 3.27e-13 | 13 |
gastrointestinal system mucosa | 3.27e-13 | 13 |
simple columnar epithelium | 6.35e-13 | 11 |
epithelium of mucosa | 2.26e-11 | 9 |
gastrointestinal system epithelium | 2.26e-11 | 9 |
intestinal epithelium | 2.26e-11 | 9 |
organ component layer | 1.29e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.