FFCP PHASE1:Mm9::chr18:35931365..35931395,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56550|HGNC=|MCL_coexpression_id=81|UniProt=P62838|association_with_transcript=109bp_to_ENSMUST00000167406_5end|description=CAGE_peak_5_at_Ube2d2_5end|id=chr18:35931365..35931395,+|ontology_enrichment_celltype=CL:0000063!2.40e-25!66;CL:0000144!3.70e-20!121;CL:0000012!3.70e-20!121;CL:0002371!3.15e-18!118;CL:0000548!3.03e-16!115;CL:0000004!3.03e-16!115;CL:0000255!3.03e-16!115;CL:0000988!1.87e-14!32;CL:0002032!1.87e-14!32;CL:0000037!1.87e-14!32;CL:0000566!1.87e-14!32;CL:0000837!1.87e-14!32;CL:0000066!1.51e-12!25;CL:0002031!2.00e-12!25;CL:0002076!2.05e-12!15;CL:0000219!8.28e-12!54;CL:0002320!1.42e-11!46;CL:0000134!1.42e-11!46;CL:0000838!2.37e-10!12;CL:0000791!7.37e-10!9;CL:0000789!7.37e-10!9;CL:0002420!7.37e-10!9;CL:0002419!7.37e-10!9;CL:0000790!7.37e-10!9;CL:0000034!7.55e-10!97;CL:0000223!1.30e-09!20;CL:0000738!1.93e-09!17;CL:0002087!1.93e-09!17;CL:0000084!2.61e-09!11;CL:0000827!2.61e-09!11;CL:0000542!2.97e-09!13;CL:0000051!2.97e-09!13;CL:0000624!7.96e-09!8;CL:0000723!3.50e-07!91;CL:0000048!3.50e-07!91;CL:0002563!3.59e-07!9;CL:0002251!3.59e-07!9;CL:0000049!8.08e-07!19;CL:0000893!8.75e-07!6;CL:0002489!8.75e-07!6;CL:0000898!8.75e-07!6;CL:0000809!8.75e-07!6;CL:0000810!8.75e-07!6;CL:0000895!8.75e-07!6;CL:0000808!8.75e-07!6;CL:0000894!8.75e-07!6;CL:0000806!8.75e-07!6;CL:0000807!8.75e-07!6;CL:0000805!8.75e-07!6;CL:0002425!8.75e-07!6;CL:0002436!8.75e-07!6;CL:0002427!8.75e-07!6;CL:0002428!8.75e-07!6;CL:0002429!8.75e-07!6;CL:0002433!8.75e-07!6;CL:0002431!8.75e-07!6;CL:0002432!8.75e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,1.87e-20,32;CL:0002032,1.87e-20,32;CL:0000037,1.87e-20,32;CL:0000837,1.87e-20,32;CL:0000066,1.79e-18,25;CL:0002320,6.60e-18,46;CL:0000134,6.60e-18,46;CL:0002076,2.28e-17,15;CL:0002031,4.72e-17,25;CL:0000219,9.15e-17,54;CL:0000838,1.19e-14,12;CL:0000223,3.69e-14,20;CL:0000034,5.34e-14,97;CL:0000738,5.71e-14,17;CL:0002087,5.71e-14,17;CL:0000791,1.21e-13,9;CL:0000789,1.21e-13,9;CL:0002420,1.21e-13,9;CL:0002419,1.21e-13,9;CL:0000790,1.21e-13,9;CL:0000542,2.76e-13,13;CL:0000051,2.76e-13,13;CL:0000084,3.97e-13,11;CL:0000827,3.97e-13,11;CL:0000624,3.84e-12,8;CL:0000723,4.54e-10,91;CL:0000048,4.54e-10,91;CL:0002563,9.71e-10,9;CL:0002251,9.71e-10,9;CL:0000893,3.53e-09,6;CL:0002489,3.53e-09,6;CL:0000898,3.53e-09,6;CL:0000809,3.53e-09,6;CL:0000810,3.53e-09,6;CL:0000895,3.53e-09,6;CL:0000808,3.53e-09,6;CL:0000894,3.53e-09,6;CL:0000806,3.53e-09,6;CL:0000807,3.53e-09,6;CL:0000805,3.53e-09,6;CL:0002425,3.53e-09,6;CL:0002436,3.53e-09,6;CL:0002427,3.53e-09,6;CL:0002428,3.53e-09,6;CL:0002429,3.53e-09,6;CL:0002433,3.53e-09,6;CL:0002431,3.53e-09,6;CL:0002432,3.53e-09,6;CL:0000049,5.76e-09,19;CL:0000075,2.83e-08,7;CL:0000239,1.79e-07,6;CL:0000677,1.79e-07,6;CL:0000584,1.79e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.42e-11!46;UBERON:0000344!3.89e-09!15;UBERON:0000485!3.00e-08!11;UBERON:0001242!7.22e-08!13;UBERON:0000060!7.22e-08!13;UBERON:0001262!7.22e-08!13;UBERON:0004786!7.22e-08!13;UBERON:0002193!1.32e-07!48;UBERON:0003350!3.59e-07!9;UBERON:0004808!3.59e-07!9;UBERON:0001277!3.59e-07!9;UBERON:0000072!4.42e-07!27;UBERON:0000490!5.73e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.60e-18,46;UBERON:0000485,2.64e-11,11;UBERON:0000344,4.04e-11,15;UBERON:0003350,9.71e-10,9;UBERON:0004808,9.71e-10,9;UBERON:0001277,9.71e-10,9;UBERON:0001242,2.58e-09,13;UBERON:0001262,2.58e-09,13;UBERON:0004786,2.58e-09,13;UBERON:0002193,1.22e-07,48;UBERON:0002405,1.22e-07,48;UBERON:0000490,7.43e-07,66|phase1_expression=2.24208385946712,2.44282785347553,5.45999087267443,5.74682001482977,8.01433167914156,4.8684988854448,4.67225281191051,10.8463591690924,9.57363310631334,8.19225842126977,7.0199366972457,5.42450681168288,20.0304854019511,10.7527094975367,0,3.23960427823721,6.29605690315332,16.7194947639866,15.76815986466,15.7024171165271,0,0,6.00759515019551,4.7997726838022,4.35877634027623,1.72269589234506,4.30761996159075,4.95583835177545,4.94060890586572,0.504060259519861,1.33038306393183,0.635030673459631,0,0,2.3108129580102,3.32469290716985,1.42918549383658,4.18531630736908,7.813353445238,8.89990364755457,10.5881667845583,8.19654581950135,9.71020706062307,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,25.1673909086605,26.8383992544197,18.821252751978,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,6.13382165998791,7.40601289046498,11.5945795480671,9.46466264679525,0,0,0,0,0,0,4.1565760736459,7.77347063922748,3.80277233397037,6.41632387071589,7.64415719119937,21.3320010945999,9.74209684550464,9.37431502257865,7.07734223020697,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,5.03223522924865,12.5979573508616,3.81210681219194,0,0,0,0,0.255715457330331,0,0,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,5.91900186363845,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,34.6819953060326,28.8270012423916,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,4.41943917984024,4.75834937900437,6.08079884739465,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0.147689527174577,0.100966449948148,0,0.201652370273681,0.194915761479505,0,0.116876902181569,0,6.43759264784788,4.12683740403588,4.86865387455827,0,0,0,0,0,0,0,0,10.4830441229649,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p5@Ube2d2}} | ||
|EntrezGene=56550 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|UniProt=P62838 | |||
|association_with_transcript=109bp_to_ENSMUST00000167406_5end | |||
|description=CAGE_peak_5_at_Ube2d2_5end | |||
|id=chr18:35931365..35931395,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.40e-25!66;CL:0000144!3.70e-20!121;CL:0000012!3.70e-20!121;CL:0002371!3.15e-18!118;CL:0000548!3.03e-16!115;CL:0000004!3.03e-16!115;CL:0000255!3.03e-16!115;CL:0000988!1.87e-14!32;CL:0002032!1.87e-14!32;CL:0000037!1.87e-14!32;CL:0000566!1.87e-14!32;CL:0000837!1.87e-14!32;CL:0000066!1.51e-12!25;CL:0002031!2.00e-12!25;CL:0002076!2.05e-12!15;CL:0000219!8.28e-12!54;CL:0002320!1.42e-11!46;CL:0000134!1.42e-11!46;CL:0000838!2.37e-10!12;CL:0000791!7.37e-10!9;CL:0000789!7.37e-10!9;CL:0002420!7.37e-10!9;CL:0002419!7.37e-10!9;CL:0000790!7.37e-10!9;CL:0000034!7.55e-10!97;CL:0000223!1.30e-09!20;CL:0000738!1.93e-09!17;CL:0002087!1.93e-09!17;CL:0000084!2.61e-09!11;CL:0000827!2.61e-09!11;CL:0000542!2.97e-09!13;CL:0000051!2.97e-09!13;CL:0000624!7.96e-09!8;CL:0000723!3.50e-07!91;CL:0000048!3.50e-07!91;CL:0002563!3.59e-07!9;CL:0002251!3.59e-07!9;CL:0000049!8.08e-07!19;CL:0000893!8.75e-07!6;CL:0002489!8.75e-07!6;CL:0000898!8.75e-07!6;CL:0000809!8.75e-07!6;CL:0000810!8.75e-07!6;CL:0000895!8.75e-07!6;CL:0000808!8.75e-07!6;CL:0000894!8.75e-07!6;CL:0000806!8.75e-07!6;CL:0000807!8.75e-07!6;CL:0000805!8.75e-07!6;CL:0002425!8.75e-07!6;CL:0002436!8.75e-07!6;CL:0002427!8.75e-07!6;CL:0002428!8.75e-07!6;CL:0002429!8.75e-07!6;CL:0002433!8.75e-07!6;CL:0002431!8.75e-07!6;CL:0002432!8.75e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.87e-20,32;CL:0002032,1.87e-20,32;CL:0000037,1.87e-20,32;CL:0000837,1.87e-20,32;CL:0000066,1.79e-18,25;CL:0002320,6.60e-18,46;CL:0000134,6.60e-18,46;CL:0002076,2.28e-17,15;CL:0002031,4.72e-17,25;CL:0000219,9.15e-17,54;CL:0000838,1.19e-14,12;CL:0000223,3.69e-14,20;CL:0000034,5.34e-14,97;CL:0000738,5.71e-14,17;CL:0002087,5.71e-14,17;CL:0000791,1.21e-13,9;CL:0000789,1.21e-13,9;CL:0002420,1.21e-13,9;CL:0002419,1.21e-13,9;CL:0000790,1.21e-13,9;CL:0000542,2.76e-13,13;CL:0000051,2.76e-13,13;CL:0000084,3.97e-13,11;CL:0000827,3.97e-13,11;CL:0000624,3.84e-12,8;CL:0000723,4.54e-10,91;CL:0000048,4.54e-10,91;CL:0002563,9.71e-10,9;CL:0002251,9.71e-10,9;CL:0000893,3.53e-09,6;CL:0002489,3.53e-09,6;CL:0000898,3.53e-09,6;CL:0000809,3.53e-09,6;CL:0000810,3.53e-09,6;CL:0000895,3.53e-09,6;CL:0000808,3.53e-09,6;CL:0000894,3.53e-09,6;CL:0000806,3.53e-09,6;CL:0000807,3.53e-09,6;CL:0000805,3.53e-09,6;CL:0002425,3.53e-09,6;CL:0002436,3.53e-09,6;CL:0002427,3.53e-09,6;CL:0002428,3.53e-09,6;CL:0002429,3.53e-09,6;CL:0002433,3.53e-09,6;CL:0002431,3.53e-09,6;CL:0002432,3.53e-09,6;CL:0000049,5.76e-09,19;CL:0000075,2.83e-08,7;CL:0000239,1.79e-07,6;CL:0000677,1.79e-07,6;CL:0000584,1.79e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.42e-11!46;UBERON:0000344!3.89e-09!15;UBERON:0000485!3.00e-08!11;UBERON:0001242!7.22e-08!13;UBERON:0000060!7.22e-08!13;UBERON:0001262!7.22e-08!13;UBERON:0004786!7.22e-08!13;UBERON:0002193!1.32e-07!48;UBERON:0003350!3.59e-07!9;UBERON:0004808!3.59e-07!9;UBERON:0001277!3.59e-07!9;UBERON:0000072!4.42e-07!27;UBERON:0000490!5.73e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.60e-18,46;UBERON:0000485,2.64e-11,11;UBERON:0000344,4.04e-11,15;UBERON:0003350,9.71e-10,9;UBERON:0004808,9.71e-10,9;UBERON:0001277,9.71e-10,9;UBERON:0001242,2.58e-09,13;UBERON:0001262,2.58e-09,13;UBERON:0004786,2.58e-09,13;UBERON:0002193,1.22e-07,48;UBERON:0002405,1.22e-07,48;UBERON:0000490,7.43e-07,66 | |||
|phase1_expression=2.24208385946712,2.44282785347553,5.45999087267443,5.74682001482977,8.01433167914156,4.8684988854448,4.67225281191051,10.8463591690924,9.57363310631334,8.19225842126977,7.0199366972457,5.42450681168288,20.0304854019511,10.7527094975367,0,3.23960427823721,6.29605690315332,16.7194947639866,15.76815986466,15.7024171165271,0,0,6.00759515019551,4.7997726838022,4.35877634027623,1.72269589234506,4.30761996159075,4.95583835177545,4.94060890586572,0.504060259519861,1.33038306393183,0.635030673459631,0,0,2.3108129580102,3.32469290716985,1.42918549383658,4.18531630736908,7.813353445238,8.89990364755457,10.5881667845583,8.19654581950135,9.71020706062307,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,25.1673909086605,26.8383992544197,18.821252751978,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,6.13382165998791,7.40601289046498,11.5945795480671,9.46466264679525,0,0,0,0,0,0,4.1565760736459,7.77347063922748,3.80277233397037,6.41632387071589,7.64415719119937,21.3320010945999,9.74209684550464,9.37431502257865,7.07734223020697,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,5.03223522924865,12.5979573508616,3.81210681219194,0,0,0,0,0.255715457330331,0,0,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,5.91900186363845,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,34.6819953060326,28.8270012423916,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,4.41943917984024,4.75834937900437,6.08079884739465,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0.147689527174577,0.100966449948148,0,0.201652370273681,0.194915761479505,0,0.116876902181569,0,6.43759264784788,4.12683740403588,4.86865387455827,0,0,0,0,0,0,0,0,10.4830441229649,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p5@Ube2d2 | |||
}} |
Revision as of 16:01, 13 September 2013
Short description: | p5@Ube2d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ube2d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | 109bp_to_ENSMUST00000167406_5end |
EntrezGene: | Ube2d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.60e-18 | 46 |
simple columnar epithelium | 2.64e-11 | 11 |
mucosa | 4.04e-11 | 15 |
epithelium of mucosa | 9.71e-10 | 9 |
gastrointestinal system epithelium | 9.71e-10 | 9 |
intestinal epithelium | 9.71e-10 | 9 |
intestinal mucosa | 2.58e-09 | 13 |
wall of intestine | 2.58e-09 | 13 |
gastrointestinal system mucosa | 2.58e-09 | 13 |
hemolymphoid system | 1.22e-07 | 48 |
immune system | 1.22e-07 | 48 |
unilaminar epithelium | 7.43e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.