FFCP PHASE1:Mm9::chr19:22522497..22522530,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226025|HGNC=|MCL_coexpression_id=30|UniProt=B2RUS0|association_with_transcript=-167bp_to_NM_177341,uc008gzo.1_5end|description=CAGE_peak_3_at_Trpm3_5end|id=chr19:22522497..22522530,+|ontology_enrichment_celltype=CL:0000117!8.49e-11!23;CL:0000337!8.49e-11!23;CL:0000540!2.17e-07!33;CL:0000047!2.17e-07!33;CL:0000031!2.17e-07!33;CL:0000404!2.17e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.56e-11,23;CL:0000337,8.56e-11,23;CL:0000540,8.02e-07,33;CL:0000047,8.02e-07,33;CL:0000031,8.02e-07,33;CL:0000404,8.02e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.71e-23!71;UBERON:0003075!2.71e-23!71;UBERON:0007284!2.71e-23!71;UBERON:0000033!8.82e-23!63;UBERON:0004121!1.08e-19!102;UBERON:0000924!1.08e-19!102;UBERON:0006601!1.08e-19!102;UBERON:0001049!3.28e-19!52;UBERON:0005068!3.28e-19!52;UBERON:0006241!3.28e-19!52;UBERON:0007135!3.28e-19!52;UBERON:0000955!3.79e-18!50;UBERON:0006238!3.79e-18!50;UBERON:0001017!8.16e-18!73;UBERON:0005743!8.16e-18!73;UBERON:0002616!2.14e-17!49;UBERON:0003056!2.26e-17!49;UBERON:0000073!3.62e-17!75;UBERON:0001016!3.62e-17!75;UBERON:0002020!1.09e-14!34;UBERON:0003080!1.03e-13!40;UBERON:0000153!2.24e-13!94;UBERON:0002780!5.59e-13!39;UBERON:0001890!5.59e-13!39;UBERON:0006240!5.59e-13!39;UBERON:0007811!6.68e-13!86;UBERON:0002791!1.55e-11!29;UBERON:0003528!1.55e-11!29;UBERON:0001893!1.55e-11!29;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000956!2.70e-07!21;UBERON:0001869!2.70e-07!21;UBERON:0000203!2.70e-07!21;UBERON:0002619!3.65e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-19,54;UBERON:0002346,1.42e-19,64;UBERON:0003075,1.42e-19,64;UBERON:0007284,1.42e-19,64;UBERON:0010371,1.00e-18,73;UBERON:0004121,4.88e-18,95;UBERON:0000924,4.88e-18,95;UBERON:0006601,4.88e-18,95;UBERON:0001049,1.00e-17,52;UBERON:0005068,1.00e-17,52;UBERON:0006241,1.00e-17,52;UBERON:0007135,1.00e-17,52;UBERON:0001017,1.27e-17,73;UBERON:0001016,9.17e-17,75;UBERON:0002020,4.20e-15,34;UBERON:0000955,1.11e-13,47;UBERON:0006238,1.11e-13,47;UBERON:0003056,1.98e-13,49;UBERON:0002616,8.25e-13,46;UBERON:0010314,1.73e-12,92;UBERON:0003528,5.78e-11,29;UBERON:0002791,5.78e-11,29;UBERON:0001893,5.78e-11,29;UBERON:0002021,2.73e-10,10;UBERON:0000411,2.73e-10,10;UBERON:0001950,2.73e-10,10;UBERON:0003080,2.78e-10,40;UBERON:0002780,1.88e-09,39;UBERON:0001890,1.88e-09,39;UBERON:0006240,1.88e-09,39;UBERON:0003076,2.95e-09,12;UBERON:0003057,2.95e-09,12;UBERON:0002619,3.63e-07,17;UBERON:0002240,3.71e-07,6;UBERON:0005174,3.71e-07,6;UBERON:0001137,3.71e-07,6|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.945041568321835,0,5.42736870367227,6.84692476950002,0.244981598429908,0.191690942036473,0.919218786610021,28.6301290598411,13.6625451751151,17.5111447912118,3.16527090552465,4.7573574673253,4.68822033501084,12.5632349550621,11.2552522006336,13.2934475565825,14.142172102736,12.2439645487229,4.65998614563251,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0.170430322578058,0,0,11.9716906810178,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,0.867426633830679,0.913396434936424,1.38369298353635,0.753613202763113,0.940709657085638,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,120.332907571746,98.2305054955104,0,0,0,0,37.8970317694201,10.980014467647,0.628271760564322,9.21268897019065,9.97290283588289,18.2853479212413,17.8465389374533,3.25885964321012,0.124406970610093,0,3.78795340595653,0.390361328888111,0.919608417733892,1.26043490863744,2.86339153887859,1.63287597963187,2.3060469651273,2.24884138943349,7.24369438069244,0,0,1.93546236580344,1.09597866213787,3.61461423993277,1.0447564995665,1.4404749548556,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0.268273401399619,0,0.16455984991348,0.492502392237286,0.648550476366846,0.146199987425332,0.219550115291051,0,17.2437757822584,1.44066457330998,0,0,0,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.799739588268102,1.1270773567308,0,0,0,0.252946148497029,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.678980343100753,2.11221223459652,2.01007508930179,1.42826184531608,0.390267295715598,0.788175720530955,0.44292937929755,0,0,0,0,0,0,0,0,29.7018591477415,30.9438852603416,0,0.252470927204373,0,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,27.9549545286972,0,0,0.162886959353576,1.15479086080775,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0.214337035031592,0.886701168211368,0.891844088010353,1.15184314421485,0,0,0,0,1.48397627647332,0,0,0,0,0,28.5554965096185,0,0,0.185194527369712,0,0,0,0,0,0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| ||
|EntrezGene=226025 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=B2RUS0 | |||
|association_with_transcript=-167bp_to_NM_177341,uc008gzo.1_5end | |||
|description=CAGE_peak_3_at_Trpm3_5end | |||
|id=chr19:22522497..22522530,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.49e-11!23;CL:0000337!8.49e-11!23;CL:0000540!2.17e-07!33;CL:0000047!2.17e-07!33;CL:0000031!2.17e-07!33;CL:0000404!2.17e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.56e-11,23;CL:0000337,8.56e-11,23;CL:0000540,8.02e-07,33;CL:0000047,8.02e-07,33;CL:0000031,8.02e-07,33;CL:0000404,8.02e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.71e-23!71;UBERON:0003075!2.71e-23!71;UBERON:0007284!2.71e-23!71;UBERON:0000033!8.82e-23!63;UBERON:0004121!1.08e-19!102;UBERON:0000924!1.08e-19!102;UBERON:0006601!1.08e-19!102;UBERON:0001049!3.28e-19!52;UBERON:0005068!3.28e-19!52;UBERON:0006241!3.28e-19!52;UBERON:0007135!3.28e-19!52;UBERON:0000955!3.79e-18!50;UBERON:0006238!3.79e-18!50;UBERON:0001017!8.16e-18!73;UBERON:0005743!8.16e-18!73;UBERON:0002616!2.14e-17!49;UBERON:0003056!2.26e-17!49;UBERON:0000073!3.62e-17!75;UBERON:0001016!3.62e-17!75;UBERON:0002020!1.09e-14!34;UBERON:0003080!1.03e-13!40;UBERON:0000153!2.24e-13!94;UBERON:0002780!5.59e-13!39;UBERON:0001890!5.59e-13!39;UBERON:0006240!5.59e-13!39;UBERON:0007811!6.68e-13!86;UBERON:0002791!1.55e-11!29;UBERON:0003528!1.55e-11!29;UBERON:0001893!1.55e-11!29;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000956!2.70e-07!21;UBERON:0001869!2.70e-07!21;UBERON:0000203!2.70e-07!21;UBERON:0002619!3.65e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-19,54;UBERON:0002346,1.42e-19,64;UBERON:0003075,1.42e-19,64;UBERON:0007284,1.42e-19,64;UBERON:0010371,1.00e-18,73;UBERON:0004121,4.88e-18,95;UBERON:0000924,4.88e-18,95;UBERON:0006601,4.88e-18,95;UBERON:0001049,1.00e-17,52;UBERON:0005068,1.00e-17,52;UBERON:0006241,1.00e-17,52;UBERON:0007135,1.00e-17,52;UBERON:0001017,1.27e-17,73;UBERON:0001016,9.17e-17,75;UBERON:0002020,4.20e-15,34;UBERON:0000955,1.11e-13,47;UBERON:0006238,1.11e-13,47;UBERON:0003056,1.98e-13,49;UBERON:0002616,8.25e-13,46;UBERON:0010314,1.73e-12,92;UBERON:0003528,5.78e-11,29;UBERON:0002791,5.78e-11,29;UBERON:0001893,5.78e-11,29;UBERON:0002021,2.73e-10,10;UBERON:0000411,2.73e-10,10;UBERON:0001950,2.73e-10,10;UBERON:0003080,2.78e-10,40;UBERON:0002780,1.88e-09,39;UBERON:0001890,1.88e-09,39;UBERON:0006240,1.88e-09,39;UBERON:0003076,2.95e-09,12;UBERON:0003057,2.95e-09,12;UBERON:0002619,3.63e-07,17;UBERON:0002240,3.71e-07,6;UBERON:0005174,3.71e-07,6;UBERON:0001137,3.71e-07,6 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.945041568321835,0,5.42736870367227,6.84692476950002,0.244981598429908,0.191690942036473,0.919218786610021,28.6301290598411,13.6625451751151,17.5111447912118,3.16527090552465,4.7573574673253,4.68822033501084,12.5632349550621,11.2552522006336,13.2934475565825,14.142172102736,12.2439645487229,4.65998614563251,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0.170430322578058,0,0,11.9716906810178,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,0.867426633830679,0.913396434936424,1.38369298353635,0.753613202763113,0.940709657085638,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,120.332907571746,98.2305054955104,0,0,0,0,37.8970317694201,10.980014467647,0.628271760564322,9.21268897019065,9.97290283588289,18.2853479212413,17.8465389374533,3.25885964321012,0.124406970610093,0,3.78795340595653,0.390361328888111,0.919608417733892,1.26043490863744,2.86339153887859,1.63287597963187,2.3060469651273,2.24884138943349,7.24369438069244,0,0,1.93546236580344,1.09597866213787,3.61461423993277,1.0447564995665,1.4404749548556,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0.268273401399619,0,0.16455984991348,0.492502392237286,0.648550476366846,0.146199987425332,0.219550115291051,0,17.2437757822584,1.44066457330998,0,0,0,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.799739588268102,1.1270773567308,0,0,0,0.252946148497029,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.678980343100753,2.11221223459652,2.01007508930179,1.42826184531608,0.390267295715598,0.788175720530955,0.44292937929755,0,0,0,0,0,0,0,0,29.7018591477415,30.9438852603416,0,0.252470927204373,0,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,27.9549545286972,0,0,0.162886959353576,1.15479086080775,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0.214337035031592,0.886701168211368,0.891844088010353,1.15184314421485,0,0,0,0,1.48397627647332,0,0,0,0,0,28.5554965096185,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0,0.418176592028937,0,0,0.247960367176008,0,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0.202725215290164,0.616265742988964,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0,0,0,0,0,5.0827665835536,4.60325236507177,8.59343270159095,6.53042092906013,7.53590771747707,8.3093328712867,6.75022500231806,10.8077088773813,5.43770890781046,10.8729665467882,0,0.399024873401031,1.02440163452481,1.70174701947806,0.419226325255965,1.10306105070008,1.55572709461131,1.44224540067226,0.962757628775446,2.27427490587418,3.29523089857312,1.50901073108861,1.77918864192777,1.6646539625266,1.78049953762401,0.476293691283074,2.0859178670074,1.35036454324594,1.23625770240992,1.47198920134397,2.05721551431249,0.532427418478012,1.1921809497366,1.59881058295561,2.4468438907986,1.69229215783353,1.64635175585495,2.10455769150274,1.7654534799962,1.12228454331548,2.01679530811096,2.06859412988683,2.45538625901814,0.929621047115796,1.73615949883027,2.24829520144151,1.16965804222704,0.644613162144895,0.57386499620653,1.54413993383661,1.85494268496337 | |||
|short_description=p3@Trpm3 | |||
}} |
Revision as of 17:11, 13 September 2013
Short description: | p3@Trpm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trpm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -167bp_to_NM_177341, uc008gzo.1_5end |
EntrezGene: | Trpm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.56e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.56e-11 | 23 |
neuron | 8.02e-07 | 33 |
neuronal stem cell | 8.02e-07 | 33 |
neuroblast | 8.02e-07 | 33 |
electrically signaling cell | 8.02e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.