FFCP PHASE1:Mm9::chr19:55969980..55969987,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=141|UniProt=Q8C834|association_with_transcript=-12bp_to_ENSMUST00000111646_5end|description=CAGE_peak_37_at_Tcf7l2_5end|id=chr19:55969980..55969987,+|ontology_enrichment_celltype=CL:0002613!1.55e-08!3;CL:0000120!4.09e-08!3|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0000117,2.34e-23,23;CL:0000337,2.34e-23,23;CL:0000540,2.59e-16,33;CL:0000047,2.59e-16,33;CL:0000031,2.59e-16,33;CL:0000404,2.59e-16,33;CL:0002610,1.46e-15,3;CL:0000120,3.36e-15,3;CL:0000393,8.25e-14,39;CL:0000211,8.25e-14,39;CL:0002319,1.59e-12,43;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002321,1.15e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!3.95e-12!5;UBERON:0002435!3.95e-12!5;UBERON:0000204!3.95e-12!5;UBERON:0010082!3.95e-12!5;UBERON:0002420!2.12e-07!8;UBERON:0007245!2.12e-07!8;UBERON:0010009!2.12e-07!8;UBERON:0010011!2.12e-07!8;UBERON:0000454!2.12e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0004684,1.46e-15,3;UBERON:0002275,1.46e-15,3;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0002259,5.53e-12,1;UBERON:0002314,5.53e-12,1;UBERON:0004061,5.53e-12,1;UBERON:0006777,5.53e-12,1;UBERON:0005882,5.53e-12,1;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0000073,2.00e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,2.68143409978894,2.15049146558741,6.98997324970027,5.30628332893976,8.33461392890816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.229741875822453,0.476293691283074,0.231768651889711,0,0,0.441596760403192,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p37@Tcf7l2}} | ||
|EntrezGene=21416 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt=Q8C834 | |||
|association_with_transcript=-12bp_to_ENSMUST00000111646_5end | |||
|description=CAGE_peak_37_at_Tcf7l2_5end | |||
|id=chr19:55969980..55969987,+ | |||
|ontology_enrichment_celltype=CL:0002613!1.55e-08!3;CL:0000120!4.09e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0000117,2.34e-23,23;CL:0000337,2.34e-23,23;CL:0000540,2.59e-16,33;CL:0000047,2.59e-16,33;CL:0000031,2.59e-16,33;CL:0000404,2.59e-16,33;CL:0002610,1.46e-15,3;CL:0000120,3.36e-15,3;CL:0000393,8.25e-14,39;CL:0000211,8.25e-14,39;CL:0002319,1.59e-12,43;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002321,1.15e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!3.95e-12!5;UBERON:0002435!3.95e-12!5;UBERON:0000204!3.95e-12!5;UBERON:0010082!3.95e-12!5;UBERON:0002420!2.12e-07!8;UBERON:0007245!2.12e-07!8;UBERON:0010009!2.12e-07!8;UBERON:0010011!2.12e-07!8;UBERON:0000454!2.12e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0004684,1.46e-15,3;UBERON:0002275,1.46e-15,3;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0002259,5.53e-12,1;UBERON:0002314,5.53e-12,1;UBERON:0004061,5.53e-12,1;UBERON:0006777,5.53e-12,1;UBERON:0005882,5.53e-12,1;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0000073,2.00e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,2.68143409978894,2.15049146558741,6.98997324970027,5.30628332893976,8.33461392890816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.229741875822453,0.476293691283074,0.231768651889711,0,0,0.441596760403192,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p37@Tcf7l2 | |||
}} |
Revision as of 18:07, 13 September 2013
Short description: | p37@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_37_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -12bp_to_ENSMUST00000111646_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.67e-34 | 3 |
CNS neuron (sensu Vertebrata) | 2.34e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-23 | 23 |
neuron | 2.59e-16 | 33 |
neuronal stem cell | 2.59e-16 | 33 |
neuroblast | 2.59e-16 | 33 |
electrically signaling cell | 2.59e-16 | 33 |
raphe nuclei neuron | 1.46e-15 | 3 |
granule cell | 3.36e-15 | 3 |
electrically responsive cell | 8.25e-14 | 39 |
electrically active cell | 8.25e-14 | 39 |
neural cell | 1.59e-12 | 43 |
ectodermal cell | 3.05e-12 | 44 |
neurectodermal cell | 3.05e-12 | 44 |
embryonic cell | 1.15e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.72e-21 | 5 |
striatum | 7.72e-21 | 5 |
ventral part of telencephalon | 7.72e-21 | 5 |
future corpus striatum | 7.72e-21 | 5 |
raphe nuclei | 1.46e-15 | 3 |
reticular formation | 1.46e-15 | 3 |
basal ganglion | 2.64e-13 | 8 |
nuclear complex of neuraxis | 2.64e-13 | 8 |
aggregate regional part of brain | 2.64e-13 | 8 |
collection of basal ganglia | 2.64e-13 | 8 |
cerebral subcortex | 2.64e-13 | 8 |
corpora quadrigemina | 5.53e-12 | 1 |
midbrain tectum | 5.53e-12 | 1 |
neural tube mantle layer | 5.53e-12 | 1 |
tectal plate | 5.53e-12 | 1 |
neural tube alar plate | 5.53e-12 | 1 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
regional part of nervous system | 2.00e-07 | 54 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.