FFCP PHASE1:Mm9::chr1:107352544..107352553,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=484|UniProt=|association_with_transcript=-6bp_to_ENSMUST00000086725_5end|description=CAGE_peak_1_at_ENSMUST00000086725_5end|id=chr1:107352544..107352553,+|ontology_enrichment_celltype=CL:0000063!1.06e-17!66;CL:0000988!1.62e-11!32;CL:0002032!1.62e-11!32;CL:0000037!1.62e-11!32;CL:0000566!1.62e-11!32;CL:0000837!1.62e-11!32;CL:0002031!3.97e-10!25;CL:0000144!4.23e-10!121;CL:0000012!4.23e-10!121;CL:0000838!2.00e-09!12;CL:0002371!5.28e-09!118;CL:0002320!6.46e-09!46;CL:0000134!6.46e-09!46;CL:0000084!1.24e-08!11;CL:0000827!1.24e-08!11;CL:0000542!2.74e-08!13;CL:0000051!2.74e-08!13;CL:0000791!3.97e-08!9;CL:0000789!3.97e-08!9;CL:0002420!3.97e-08!9;CL:0002419!3.97e-08!9;CL:0000790!3.97e-08!9;CL:0000738!6.74e-08!17;CL:0002087!6.74e-08!17;CL:0002076!9.86e-08!15;CL:0000066!1.17e-07!25;CL:0000548!1.37e-07!115;CL:0000004!1.37e-07!115;CL:0000255!1.37e-07!115;CL:0000219!2.08e-07!54;CL:0000624!2.66e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,2.58e-22,32;CL:0002032,2.58e-22,32;CL:0000037,2.58e-22,32;CL:0000837,2.58e-22,32;CL:0002320,5.69e-19,46;CL:0000134,5.69e-19,46;CL:0002031,7.19e-19,25;CL:0000219,1.36e-17,54;CL:0000034,6.87e-15,97;CL:0000838,7.12e-15,12;CL:0000066,7.91e-15,25;CL:0000738,7.85e-14,17;CL:0002087,7.85e-14,17;CL:0000791,1.52e-13,9;CL:0000789,1.52e-13,9;CL:0002420,1.52e-13,9;CL:0002419,1.52e-13,9;CL:0000790,1.52e-13,9;CL:0000542,1.74e-13,13;CL:0000051,1.74e-13,13;CL:0000084,1.92e-13,11;CL:0000827,1.92e-13,11;CL:0002076,2.35e-13,15;CL:0000624,4.82e-12,8;CL:0000723,6.37e-11,91;CL:0000048,6.37e-11,91;CL:0000223,8.10e-11,20;CL:0000049,2.36e-10,19;CL:0002563,1.75e-09,9;CL:0002251,1.75e-09,9;CL:0000893,1.77e-09,6;CL:0002489,1.77e-09,6;CL:0000898,1.77e-09,6;CL:0000809,1.77e-09,6;CL:0000810,1.77e-09,6;CL:0000895,1.77e-09,6;CL:0000808,1.77e-09,6;CL:0000894,1.77e-09,6;CL:0000806,1.77e-09,6;CL:0000807,1.77e-09,6;CL:0000805,1.77e-09,6;CL:0002425,1.77e-09,6;CL:0002436,1.77e-09,6;CL:0002427,1.77e-09,6;CL:0002428,1.77e-09,6;CL:0002429,1.77e-09,6;CL:0002433,1.77e-09,6;CL:0002431,1.77e-09,6;CL:0002432,1.77e-09,6;CL:0000075,5.54e-08,7;CL:0000763,1.10e-07,16;CL:0000239,2.74e-07,6;CL:0000677,2.74e-07,6;CL:0000584,2.74e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.52e-09!15;UBERON:0002384!6.46e-09!46;UBERON:0001242!8.66e-08!13;UBERON:0000060!8.66e-08!13;UBERON:0001262!8.66e-08!13;UBERON:0004786!8.66e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.69e-19,46;UBERON:0000344,8.61e-14,15;UBERON:0001242,2.57e-11,13;UBERON:0001262,2.57e-11,13;UBERON:0004786,2.57e-11,13;UBERON:0000485,6.31e-11,11;UBERON:0003350,1.75e-09,9;UBERON:0004808,1.75e-09,9;UBERON:0001277,1.75e-09,9;UBERON:0004923,2.35e-07,24;UBERON:0002193,8.64e-07,48;UBERON:0002405,8.64e-07,48|phase1_expression=4.48416771893423,10.1202868215415,10.9199817453489,21.7774232140918,19.5349334679075,6.04365378882803,19.1562365288331,29.1818710977962,30.5511527069117,25.0449043164533,42.6332740881507,24.9686857655403,54.2706313881922,32.782650907124,0,23.8920815519995,23.785103856357,41.3255436619291,49.0869672308545,35.2243410992365,0.0850432901510698,0.0992909512008853,50.1503595146756,31.1985224447143,30.5114343819336,7.46501553349526,9.47676391549965,13.7901588918969,28.5035129184561,10.3332353201572,10.6430645114546,5.08024538767705,0,0,5.48818077527422,4.65457007003779,2.04169356262369,48.1311375347444,45.3174499823804,60.2052305569868,52.3526024347603,49.8623204019665,63.11634589405,0,0,0,0,0,0,0,0,0,47.4824775143394,34.8173828165445,50.0779760722271,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,18.7800959466296,19.1951762671235,22.3195656300292,15.487629785665,0,0,0,0,0,0,15.5871602761721,20.1403557470894,3.66192891419369,17.9657068380045,5.09610479413291,0,22.9480503471887,18.2419103142071,23.25412447068,0,0.517875767294343,0,0,0,0,0.150722640552623,0,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0,0,0,0,0,0.255457055208591,10.9031763300387,22.7963037777495,11.690460890722,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0,0,14.7464769335779,37.058098624519,0,0,0,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0,0,0,0.219550115291051,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0.403367049246685,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0,0,36.1899081454253,41.3368319702219,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.477489376012546,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,8.49892149969276,8.53703859174314,8.01559848065658,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0.483168241652012,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0.537080087002444,0.596044064343795,0,0,0.100966449948148,0.15241361331,0.302478555410522,0,0.192423683280659,0,0,21.7546234306583,9.41995494399495,27.5330770837089,0,0.375364950902364,0.183151624267265,0,0,0,0,0,4.46818274093588,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0.231867835620421|short_description=p1@ENSMUST00000086725}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=484 | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENSMUST00000086725_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000086725_5end | |||
|id=chr1:107352544..107352553,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.06e-17!66;CL:0000988!1.62e-11!32;CL:0002032!1.62e-11!32;CL:0000037!1.62e-11!32;CL:0000566!1.62e-11!32;CL:0000837!1.62e-11!32;CL:0002031!3.97e-10!25;CL:0000144!4.23e-10!121;CL:0000012!4.23e-10!121;CL:0000838!2.00e-09!12;CL:0002371!5.28e-09!118;CL:0002320!6.46e-09!46;CL:0000134!6.46e-09!46;CL:0000084!1.24e-08!11;CL:0000827!1.24e-08!11;CL:0000542!2.74e-08!13;CL:0000051!2.74e-08!13;CL:0000791!3.97e-08!9;CL:0000789!3.97e-08!9;CL:0002420!3.97e-08!9;CL:0002419!3.97e-08!9;CL:0000790!3.97e-08!9;CL:0000738!6.74e-08!17;CL:0002087!6.74e-08!17;CL:0002076!9.86e-08!15;CL:0000066!1.17e-07!25;CL:0000548!1.37e-07!115;CL:0000004!1.37e-07!115;CL:0000255!1.37e-07!115;CL:0000219!2.08e-07!54;CL:0000624!2.66e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.58e-22,32;CL:0002032,2.58e-22,32;CL:0000037,2.58e-22,32;CL:0000837,2.58e-22,32;CL:0002320,5.69e-19,46;CL:0000134,5.69e-19,46;CL:0002031,7.19e-19,25;CL:0000219,1.36e-17,54;CL:0000034,6.87e-15,97;CL:0000838,7.12e-15,12;CL:0000066,7.91e-15,25;CL:0000738,7.85e-14,17;CL:0002087,7.85e-14,17;CL:0000791,1.52e-13,9;CL:0000789,1.52e-13,9;CL:0002420,1.52e-13,9;CL:0002419,1.52e-13,9;CL:0000790,1.52e-13,9;CL:0000542,1.74e-13,13;CL:0000051,1.74e-13,13;CL:0000084,1.92e-13,11;CL:0000827,1.92e-13,11;CL:0002076,2.35e-13,15;CL:0000624,4.82e-12,8;CL:0000723,6.37e-11,91;CL:0000048,6.37e-11,91;CL:0000223,8.10e-11,20;CL:0000049,2.36e-10,19;CL:0002563,1.75e-09,9;CL:0002251,1.75e-09,9;CL:0000893,1.77e-09,6;CL:0002489,1.77e-09,6;CL:0000898,1.77e-09,6;CL:0000809,1.77e-09,6;CL:0000810,1.77e-09,6;CL:0000895,1.77e-09,6;CL:0000808,1.77e-09,6;CL:0000894,1.77e-09,6;CL:0000806,1.77e-09,6;CL:0000807,1.77e-09,6;CL:0000805,1.77e-09,6;CL:0002425,1.77e-09,6;CL:0002436,1.77e-09,6;CL:0002427,1.77e-09,6;CL:0002428,1.77e-09,6;CL:0002429,1.77e-09,6;CL:0002433,1.77e-09,6;CL:0002431,1.77e-09,6;CL:0002432,1.77e-09,6;CL:0000075,5.54e-08,7;CL:0000763,1.10e-07,16;CL:0000239,2.74e-07,6;CL:0000677,2.74e-07,6;CL:0000584,2.74e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.52e-09!15;UBERON:0002384!6.46e-09!46;UBERON:0001242!8.66e-08!13;UBERON:0000060!8.66e-08!13;UBERON:0001262!8.66e-08!13;UBERON:0004786!8.66e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.69e-19,46;UBERON:0000344,8.61e-14,15;UBERON:0001242,2.57e-11,13;UBERON:0001262,2.57e-11,13;UBERON:0004786,2.57e-11,13;UBERON:0000485,6.31e-11,11;UBERON:0003350,1.75e-09,9;UBERON:0004808,1.75e-09,9;UBERON:0001277,1.75e-09,9;UBERON:0004923,2.35e-07,24;UBERON:0002193,8.64e-07,48;UBERON:0002405,8.64e-07,48 | |||
|phase1_expression=4.48416771893423,10.1202868215415,10.9199817453489,21.7774232140918,19.5349334679075,6.04365378882803,19.1562365288331,29.1818710977962,30.5511527069117,25.0449043164533,42.6332740881507,24.9686857655403,54.2706313881922,32.782650907124,0,23.8920815519995,23.785103856357,41.3255436619291,49.0869672308545,35.2243410992365,0.0850432901510698,0.0992909512008853,50.1503595146756,31.1985224447143,30.5114343819336,7.46501553349526,9.47676391549965,13.7901588918969,28.5035129184561,10.3332353201572,10.6430645114546,5.08024538767705,0,0,5.48818077527422,4.65457007003779,2.04169356262369,48.1311375347444,45.3174499823804,60.2052305569868,52.3526024347603,49.8623204019665,63.11634589405,0,0,0,0,0,0,0,0,0,47.4824775143394,34.8173828165445,50.0779760722271,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,18.7800959466296,19.1951762671235,22.3195656300292,15.487629785665,0,0,0,0,0,0,15.5871602761721,20.1403557470894,3.66192891419369,17.9657068380045,5.09610479413291,0,22.9480503471887,18.2419103142071,23.25412447068,0,0.517875767294343,0,0,0,0,0.150722640552623,0,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0,0,0,0,0,0.255457055208591,10.9031763300387,22.7963037777495,11.690460890722,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0,0,14.7464769335779,37.058098624519,0,0,0,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0,0,0,0.219550115291051,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0.403367049246685,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0,0,36.1899081454253,41.3368319702219,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.477489376012546,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,8.49892149969276,8.53703859174314,8.01559848065658,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0.483168241652012,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0.537080087002444,0.596044064343795,0,0,0.100966449948148,0.15241361331,0.302478555410522,0,0.192423683280659,0,0,21.7546234306583,9.41995494399495,27.5330770837089,0,0.375364950902364,0.183151624267265,0,0,0,0,0,4.46818274093588,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000086725 | |||
}} |
Revision as of 18:32, 13 September 2013
Short description: | p1@ENSMUST00000086725 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000086725_5end |
Coexpression cluster: | MCL_coexpression_mm9:484 |
Association with transcript: | -6bp_to_ENSMUST00000086725_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.69e-19 | 46 |
mucosa | 8.61e-14 | 15 |
intestinal mucosa | 2.57e-11 | 13 |
wall of intestine | 2.57e-11 | 13 |
gastrointestinal system mucosa | 2.57e-11 | 13 |
simple columnar epithelium | 6.31e-11 | 11 |
epithelium of mucosa | 1.75e-09 | 9 |
gastrointestinal system epithelium | 1.75e-09 | 9 |
intestinal epithelium | 1.75e-09 | 9 |
organ component layer | 2.35e-07 | 24 |
hemolymphoid system | 8.64e-07 | 48 |
immune system | 8.64e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.