FFCP PHASE1:Mm9::chr1:174130688..174130720,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174130688..174130720,-|id=chr1:174130688..174130720,-|ontology_enrichment_celltype=CL:0000055!5.60e-17!50;CL:0000221!1.01e-16!44;CL:0000133!1.01e-16!44;CL:0002319!1.35e-16!43;CL:0000117!5.22e-13!23;CL:0000337!5.22e-13!23;CL:0000393!6.89e-12!39;CL:0000211!6.89e-12!39;CL:0000540!1.07e-10!33;CL:0000047!1.07e-10!33;CL:0000031!1.07e-10!33;CL:0000404!1.07e-10!33;CL:0002321!1.05e-08!70;CL:0000220!1.05e-08!70;CL:0000333!2.38e-07!10;CL:0000095!2.38e-07!10;CL:0000243!2.38e-07!10;CL:0000123!2.38e-07!10;CL:0000125!2.38e-07!10;CL:0000030!2.38e-07!10;CL:0000339!2.38e-07!10;CL:0002453!6.55e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,6.60e-23,43;CL:0000221,3.31e-22,44;CL:0000133,3.31e-22,44;CL:0000117,1.13e-21,23;CL:0000337,1.13e-21,23;CL:0000393,2.61e-16,39;CL:0000211,2.61e-16,39;CL:0000540,4.76e-15,33;CL:0000047,4.76e-15,33;CL:0000031,4.76e-15,33;CL:0000404,4.76e-15,33;CL:0002321,2.14e-14,70;CL:0002453,1.01e-11,8;CL:0000333,4.57e-09,10;CL:0000095,4.57e-09,10;CL:0000243,4.57e-09,10;CL:0000123,4.57e-09,10;CL:0000125,4.57e-09,10;CL:0000030,4.57e-09,10;CL:0000339,4.57e-09,10;CL:0000128,2.47e-08,6;CL:0000126,2.47e-08,6;CL:0000127,2.47e-08,6;CL:0000723,3.08e-07,91;CL:0000048,3.08e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.82e-28!75;UBERON:0001016!4.82e-28!75;UBERON:0001017!3.05e-27!73;UBERON:0005743!3.05e-27!73;UBERON:0004121!3.35e-24!102;UBERON:0000924!3.35e-24!102;UBERON:0006601!3.35e-24!102;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0000955!4.27e-21!50;UBERON:0006238!4.27e-21!50;UBERON:0002616!8.85e-21!49;UBERON:0002346!1.89e-20!71;UBERON:0003075!1.89e-20!71;UBERON:0007284!1.89e-20!71;UBERON:0000033!2.02e-20!63;UBERON:0003056!8.89e-18!49;UBERON:0002020!9.90e-18!34;UBERON:0003080!3.83e-16!40;UBERON:0002780!5.25e-16!39;UBERON:0001890!5.25e-16!39;UBERON:0006240!5.25e-16!39;UBERON:0002791!1.38e-15!29;UBERON:0003528!1.38e-15!29;UBERON:0001893!1.38e-15!29;UBERON:0000025!5.89e-13!114;UBERON:0004111!3.26e-12!122;UBERON:0000956!6.38e-12!21;UBERON:0001869!6.38e-12!21;UBERON:0000203!6.38e-12!21;UBERON:0007811!1.70e-10!86;UBERON:0002619!4.68e-10!17;UBERON:0000153!1.15e-08!94;UBERON:0002021!2.70e-07!10;UBERON:0000411!2.70e-07!10;UBERON:0001950!2.70e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.09e-35,73;UBERON:0001016,1.23e-33,75;UBERON:0002020,1.21e-29,34;UBERON:0000073,1.75e-29,54;UBERON:0004121,7.21e-27,95;UBERON:0000924,7.21e-27,95;UBERON:0006601,7.21e-27,95;UBERON:0001049,2.25e-26,52;UBERON:0005068,2.25e-26,52;UBERON:0006241,2.25e-26,52;UBERON:0007135,2.25e-26,52;UBERON:0003528,3.95e-25,29;UBERON:0002791,3.95e-25,29;UBERON:0001893,3.95e-25,29;UBERON:0002346,1.37e-22,64;UBERON:0003075,1.37e-22,64;UBERON:0007284,1.37e-22,64;UBERON:0000956,9.71e-22,21;UBERON:0001869,9.71e-22,21;UBERON:0000203,9.71e-22,21;UBERON:0002616,5.92e-21,46;UBERON:0000955,2.43e-20,47;UBERON:0006238,2.43e-20,47;UBERON:0002780,4.13e-20,39;UBERON:0001890,4.13e-20,39;UBERON:0006240,4.13e-20,39;UBERON:0003080,1.97e-19,40;UBERON:0002619,3.23e-19,17;UBERON:0010371,1.23e-18,73;UBERON:0003056,2.42e-17,49;UBERON:0010314,4.89e-16,92;UBERON:0002021,3.81e-15,10;UBERON:0000411,3.81e-15,10;UBERON:0001950,3.81e-15,10;UBERON:0000025,4.65e-11,114;UBERON:0004111,1.84e-10,122;UBERON:0011216,7.82e-08,194;UBERON:0003076,1.86e-07,12;UBERON:0003057,1.86e-07,12|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.405507724878058,0,0.782391344348039,30.5235218932625,12.7417985985994,20.609569301874,6.15940255151595,8.62515386189829,0,0.725362142011344,0,2.57259436035947,1.71920063963254,1.03134418455488,1.21389876515759,1.05798195854407,5.70448263155561,0.338844532069132,0,2.6996991518442,5.93319817540185,3.5524005747305,18.5752068521411,26.1268447618657,1.03689612308478,3.78016627328734,0.630974884054146,3.42781181284564,2.42955395046775,0.979926393719632,2.20444583341944,1.83843757322004,3.30347642998166,4.46905683298157,4.76180253094355,0.923204014111357,3.29355516968675,1.56274011167028,4.4669279840221,1.68828783009504,3.66715794664344,3.53554302568401,1.85083185038834,0.186399445825301,0.832988126665025,0.604572480854284,0.289864488701678,0,0.679971333707751,0,0,0,0.842666520790511,0.340860645156116,0.519572009205738,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.578397427679647,0,0.323533699894818,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,0.502617408451458,2.25971616249959,1.02286182932132,1.0389402227978,0,0.305518091550949,0.373220911830279,0.505445516867349,0.631325567659422,0.130120442962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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:174130688..174130720,- | |||
|id=chr1:174130688..174130720,- | |||
|ontology_enrichment_celltype=CL:0000055!5.60e-17!50;CL:0000221!1.01e-16!44;CL:0000133!1.01e-16!44;CL:0002319!1.35e-16!43;CL:0000117!5.22e-13!23;CL:0000337!5.22e-13!23;CL:0000393!6.89e-12!39;CL:0000211!6.89e-12!39;CL:0000540!1.07e-10!33;CL:0000047!1.07e-10!33;CL:0000031!1.07e-10!33;CL:0000404!1.07e-10!33;CL:0002321!1.05e-08!70;CL:0000220!1.05e-08!70;CL:0000333!2.38e-07!10;CL:0000095!2.38e-07!10;CL:0000243!2.38e-07!10;CL:0000123!2.38e-07!10;CL:0000125!2.38e-07!10;CL:0000030!2.38e-07!10;CL:0000339!2.38e-07!10;CL:0002453!6.55e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.60e-23,43;CL:0000221,3.31e-22,44;CL:0000133,3.31e-22,44;CL:0000117,1.13e-21,23;CL:0000337,1.13e-21,23;CL:0000393,2.61e-16,39;CL:0000211,2.61e-16,39;CL:0000540,4.76e-15,33;CL:0000047,4.76e-15,33;CL:0000031,4.76e-15,33;CL:0000404,4.76e-15,33;CL:0002321,2.14e-14,70;CL:0002453,1.01e-11,8;CL:0000333,4.57e-09,10;CL:0000095,4.57e-09,10;CL:0000243,4.57e-09,10;CL:0000123,4.57e-09,10;CL:0000125,4.57e-09,10;CL:0000030,4.57e-09,10;CL:0000339,4.57e-09,10;CL:0000128,2.47e-08,6;CL:0000126,2.47e-08,6;CL:0000127,2.47e-08,6;CL:0000723,3.08e-07,91;CL:0000048,3.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.82e-28!75;UBERON:0001016!4.82e-28!75;UBERON:0001017!3.05e-27!73;UBERON:0005743!3.05e-27!73;UBERON:0004121!3.35e-24!102;UBERON:0000924!3.35e-24!102;UBERON:0006601!3.35e-24!102;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0000955!4.27e-21!50;UBERON:0006238!4.27e-21!50;UBERON:0002616!8.85e-21!49;UBERON:0002346!1.89e-20!71;UBERON:0003075!1.89e-20!71;UBERON:0007284!1.89e-20!71;UBERON:0000033!2.02e-20!63;UBERON:0003056!8.89e-18!49;UBERON:0002020!9.90e-18!34;UBERON:0003080!3.83e-16!40;UBERON:0002780!5.25e-16!39;UBERON:0001890!5.25e-16!39;UBERON:0006240!5.25e-16!39;UBERON:0002791!1.38e-15!29;UBERON:0003528!1.38e-15!29;UBERON:0001893!1.38e-15!29;UBERON:0000025!5.89e-13!114;UBERON:0004111!3.26e-12!122;UBERON:0000956!6.38e-12!21;UBERON:0001869!6.38e-12!21;UBERON:0000203!6.38e-12!21;UBERON:0007811!1.70e-10!86;UBERON:0002619!4.68e-10!17;UBERON:0000153!1.15e-08!94;UBERON:0002021!2.70e-07!10;UBERON:0000411!2.70e-07!10;UBERON:0001950!2.70e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.09e-35,73;UBERON:0001016,1.23e-33,75;UBERON:0002020,1.21e-29,34;UBERON:0000073,1.75e-29,54;UBERON:0004121,7.21e-27,95;UBERON:0000924,7.21e-27,95;UBERON:0006601,7.21e-27,95;UBERON:0001049,2.25e-26,52;UBERON:0005068,2.25e-26,52;UBERON:0006241,2.25e-26,52;UBERON:0007135,2.25e-26,52;UBERON:0003528,3.95e-25,29;UBERON:0002791,3.95e-25,29;UBERON:0001893,3.95e-25,29;UBERON:0002346,1.37e-22,64;UBERON:0003075,1.37e-22,64;UBERON:0007284,1.37e-22,64;UBERON:0000956,9.71e-22,21;UBERON:0001869,9.71e-22,21;UBERON:0000203,9.71e-22,21;UBERON:0002616,5.92e-21,46;UBERON:0000955,2.43e-20,47;UBERON:0006238,2.43e-20,47;UBERON:0002780,4.13e-20,39;UBERON:0001890,4.13e-20,39;UBERON:0006240,4.13e-20,39;UBERON:0003080,1.97e-19,40;UBERON:0002619,3.23e-19,17;UBERON:0010371,1.23e-18,73;UBERON:0003056,2.42e-17,49;UBERON:0010314,4.89e-16,92;UBERON:0002021,3.81e-15,10;UBERON:0000411,3.81e-15,10;UBERON:0001950,3.81e-15,10;UBERON:0000025,4.65e-11,114;UBERON:0004111,1.84e-10,122;UBERON:0011216,7.82e-08,194;UBERON:0003076,1.86e-07,12;UBERON:0003057,1.86e-07,12 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.405507724878058,0,0.782391344348039,30.5235218932625,12.7417985985994,20.609569301874,6.15940255151595,8.62515386189829,0,0.725362142011344,0,2.57259436035947,1.71920063963254,1.03134418455488,1.21389876515759,1.05798195854407,5.70448263155561,0.338844532069132,0,2.6996991518442,5.93319817540185,3.5524005747305,18.5752068521411,26.1268447618657,1.03689612308478,3.78016627328734,0.630974884054146,3.42781181284564,2.42955395046775,0.979926393719632,2.20444583341944,1.83843757322004,3.30347642998166,4.46905683298157,4.76180253094355,0.923204014111357,3.29355516968675,1.56274011167028,4.4669279840221,1.68828783009504,3.66715794664344,3.53554302568401,1.85083185038834,0.186399445825301,0.832988126665025,0.604572480854284,0.289864488701678,0,0.679971333707751,0,0,0,0.842666520790511,0.340860645156116,0.519572009205738,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.578397427679647,0,0.323533699894818,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,0.502617408451458,2.25971616249959,1.02286182932132,1.0389402227978,0,0.305518091550949,0.373220911830279,0.505445516867349,0.631325567659422,0.130120442962704,0.689706313300419,0.360124259610698,0.452114453507145,0.272145996605311,1.15302348256365,0.468508622798644,1.29351685369508,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0,0,0,0.234526059981096,0.540186184383045,0,0.393528463494808,0.462801338662135,0.697601834251224,0,0.116765342367169,0.329119699826961,0,0.243206428637567,0.438599962275997,0.878200461164203,0.134206418760372,1.47202963994889,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.379419222745544,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,1.10851914099963,0.189491411770485,0.814824882210129,0.169745085775188,0.234690248288502,0.502518772325447,0.714130922658041,0.585400943573396,0,0,0.159454768657487,0,0,0.289298117163023,0,0.54390568381871,0,0,1.44495530989013,1.05490517932983,0.655739781506702,0,0.94652465824877,0.390438744296638,0,0.716906393857656,0.222798674082394,0,1.21443210502468,0,0.790575555893047,0.642642632843614,0,0.35613120733451,0,0,0,0.728341908464944,0,0,0,0.307435147943927,0,0,1.06949213515416,0.632073515871632,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.214337035031592,0.532020700926821,0.713475270408282,0.493647061806363,0.608929898229199,0,0.847328283455281,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,1.29797711407357,0.170870880797853,0,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.410843828659309,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.665957860122194,0.62799699626633,0.335769232728157,1.15913756419314,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,1.6942555278512,3.68260189205742,2.86447756719698,1.20297227640581,2.05524755931193,4.5323633843382,4.05013500139084,2.2516060161211,2.71885445390523,2.5888015587591,0,0,0.170733605754134,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0,0,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr1:174130688..174130720,- | |||
}} |
Revision as of 19:44, 13 September 2013
Short description: | p@chr1:174130688..174130720, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174130688..174130720, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.60e-23 | 43 |
ectodermal cell | 3.31e-22 | 44 |
neurectodermal cell | 3.31e-22 | 44 |
CNS neuron (sensu Vertebrata) | 1.13e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-21 | 23 |
electrically responsive cell | 2.61e-16 | 39 |
electrically active cell | 2.61e-16 | 39 |
neuron | 4.76e-15 | 33 |
neuronal stem cell | 4.76e-15 | 33 |
neuroblast | 4.76e-15 | 33 |
electrically signaling cell | 4.76e-15 | 33 |
embryonic cell | 2.14e-14 | 70 |
oligodendrocyte precursor cell | 1.01e-11 | 8 |
migratory neural crest cell | 4.57e-09 | 10 |
neuron associated cell | 4.57e-09 | 10 |
glial cell (sensu Vertebrata) | 4.57e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 4.57e-09 | 10 |
glial cell | 4.57e-09 | 10 |
glioblast | 4.57e-09 | 10 |
glioblast (sensu Vertebrata) | 4.57e-09 | 10 |
oligodendrocyte | 2.47e-08 | 6 |
macroglial cell | 2.47e-08 | 6 |
astrocyte | 2.47e-08 | 6 |
somatic stem cell | 3.08e-07 | 91 |
multi fate stem cell | 3.08e-07 | 91 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.