FFCP PHASE1:Mm9::chr1:179188313..179188345,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23797|HGNC=|MCL_coexpression_id=3253|UniProt=Q9WUA6|association_with_transcript=0bp_to_ENSMUST00000111159_5end|description=CAGE_peak_2_at_Akt3_5end|id=chr1:179188313..179188345,-|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!1.03e-12!23;CL:0000337!1.03e-12!23;CL:0000393!3.68e-12!39;CL:0000211!3.68e-12!39;CL:0002319!4.71e-10!43;CL:0000221!5.63e-10!44;CL:0000133!5.63e-10!44;CL:0000055!5.61e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.00e-18,33;CL:0000047,4.00e-18,33;CL:0000031,4.00e-18,33;CL:0000404,4.00e-18,33;CL:0000117,6.32e-14,23;CL:0000337,6.32e-14,23;CL:0000393,1.38e-13,39;CL:0000211,1.38e-13,39;CL:0002319,6.55e-11,43;CL:0000221,7.95e-11,44;CL:0000133,7.95e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.41e-24!73;UBERON:0005743!8.41e-24!73;UBERON:0000073!2.53e-22!75;UBERON:0001016!2.53e-22!75;UBERON:0002346!4.91e-21!71;UBERON:0003075!4.91e-21!71;UBERON:0007284!4.91e-21!71;UBERON:0000033!1.58e-19!63;UBERON:0004121!6.84e-19!102;UBERON:0000924!6.84e-19!102;UBERON:0006601!6.84e-19!102;UBERON:0003056!1.70e-18!49;UBERON:0001049!7.67e-18!52;UBERON:0005068!7.67e-18!52;UBERON:0006241!7.67e-18!52;UBERON:0007135!7.67e-18!52;UBERON:0000955!1.15e-17!50;UBERON:0006238!1.15e-17!50;UBERON:0002616!4.14e-17!49;UBERON:0003080!2.88e-15!40;UBERON:0002020!4.75e-15!34;UBERON:0002780!1.20e-14!39;UBERON:0001890!1.20e-14!39;UBERON:0006240!1.20e-14!39;UBERON:0002791!7.07e-13!29;UBERON:0003528!7.07e-13!29;UBERON:0001893!7.07e-13!29;UBERON:0000153!2.32e-11!94;UBERON:0007811!8.04e-10!86;UBERON:0000956!3.88e-09!21;UBERON:0001869!3.88e-09!21;UBERON:0000203!3.88e-09!21;UBERON:0002619!6.10e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.36e-26,73;UBERON:0002346,1.56e-24,64;UBERON:0003075,1.56e-24,64;UBERON:0007284,1.56e-24,64;UBERON:0001016,1.79e-24,75;UBERON:0004121,2.79e-22,95;UBERON:0000924,2.79e-22,95;UBERON:0006601,2.79e-22,95;UBERON:0000073,6.58e-21,54;UBERON:0010371,3.83e-20,73;UBERON:0003056,6.49e-20,49;UBERON:0001049,3.68e-19,52;UBERON:0005068,3.68e-19,52;UBERON:0006241,3.68e-19,52;UBERON:0007135,3.68e-19,52;UBERON:0000955,2.50e-17,47;UBERON:0006238,2.50e-17,47;UBERON:0002616,9.92e-17,46;UBERON:0003080,2.43e-16,40;UBERON:0002020,1.00e-15,34;UBERON:0002780,1.16e-15,39;UBERON:0001890,1.16e-15,39;UBERON:0006240,1.16e-15,39;UBERON:0010314,3.17e-15,92;UBERON:0003528,2.50e-13,29;UBERON:0002791,2.50e-13,29;UBERON:0001893,2.50e-13,29;UBERON:0000956,3.18e-09,21;UBERON:0001869,3.18e-09,21;UBERON:0000203,3.18e-09,21;UBERON:0002619,7.68e-07,17|phase1_expression=2.88267924788629,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0.234064526321993,0,0,0,0.174840804837995,1.33243904726265,0.809901069559304,0,2.5236973228659,2.05671650408608,1.27316895539409,1.53077922271926,0.992909512008853,1.04479915655574,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,0.782391344348039,0,0.439372365468944,0.58328969722285,0.279972843250725,1.43752564364972,1.17447824240415,0.725362142011344,0.336093799142464,0,1.14613375975503,0,6.67644320836673,3.1739458756322,5.70448263155561,0.338844532069132,0.889294796111139,0,0,0,0,1.15265491596466,13.0648911508682,12.1505344498522,14.7227472945967,3.14216082844184,2.87129103237098,7.7169203505421,8.14686503655009,3.67687514644008,5.50579404996943,3.70293280447044,4.14737639791857,6.06676923558892,8.32537556781928,8.85552729946492,2.51264699101243,3.93933827022176,4.43114918552749,4.71405736757868,5.69486723196412,5.96478226640962,0.151452386666368,0.377857800533928,0.869593466105033,0,0.679971333707751,0,0,0,0.421333260395256,0.170430322578058,0,0.70667914902068,1.40843419776681,0,2.54805239706646,0,0.216491041011214,0,0,0.45673551887624,3.88406825470758,0.29688427812965,1.21439728736295,1.82679286987285,1.61430848079241,0.60289056221049,2.58695155698551,0.879666139307728,0.494389935468748,0.433798070759735,0,1.61766849947409,1.54589062922275,0.969750506270444,0,4.68449275218475,5.23616767033638,0.255457055208591,1.7972268675888,3.59941638596045,0.762421362438388,6.5907881338122,3.20250421973039,6.15706325353036,3.12883776346098,3.58001640262463,4.36354893575076,3.89379031362618,2.34230536855727,0.870848794270651,0.505445516867349,1.68353484709179,3.25301107406759,2.06911893990126,5.22180176435513,3.0140963567143,5.10273743634959,5.38077625196369,4.12287588062807,5.17406741478031,2.15567992932842,4.16033376369202,4.22282697993477,1.7535658594206,2.50242524303038,0.696504333044333,3.08673204611915,2.9855140022774,0,0.257347907114715,0.284163499395593,1.24275463521301,1.64168241986767,0.720248245844059,2.3674473558521,1.96764231747404,0.462801338662135,1.39520366850245,0.536546802799238,1.05088808130453,0.822799249567402,0.656669856316381,1.29710095273369,0.584799949701329,0.878200461164203,0.805238512562231,4.6263788684108,9.77593817603202,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| ||
|EntrezGene=23797 | |||
|HGNC= | |||
|MCL_coexpression_id=3253 | |||
|UniProt=Q9WUA6 | |||
|association_with_transcript=0bp_to_ENSMUST00000111159_5end | |||
|description=CAGE_peak_2_at_Akt3_5end | |||
|id=chr1:179188313..179188345,- | |||
|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!1.03e-12!23;CL:0000337!1.03e-12!23;CL:0000393!3.68e-12!39;CL:0000211!3.68e-12!39;CL:0002319!4.71e-10!43;CL:0000221!5.63e-10!44;CL:0000133!5.63e-10!44;CL:0000055!5.61e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.00e-18,33;CL:0000047,4.00e-18,33;CL:0000031,4.00e-18,33;CL:0000404,4.00e-18,33;CL:0000117,6.32e-14,23;CL:0000337,6.32e-14,23;CL:0000393,1.38e-13,39;CL:0000211,1.38e-13,39;CL:0002319,6.55e-11,43;CL:0000221,7.95e-11,44;CL:0000133,7.95e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.41e-24!73;UBERON:0005743!8.41e-24!73;UBERON:0000073!2.53e-22!75;UBERON:0001016!2.53e-22!75;UBERON:0002346!4.91e-21!71;UBERON:0003075!4.91e-21!71;UBERON:0007284!4.91e-21!71;UBERON:0000033!1.58e-19!63;UBERON:0004121!6.84e-19!102;UBERON:0000924!6.84e-19!102;UBERON:0006601!6.84e-19!102;UBERON:0003056!1.70e-18!49;UBERON:0001049!7.67e-18!52;UBERON:0005068!7.67e-18!52;UBERON:0006241!7.67e-18!52;UBERON:0007135!7.67e-18!52;UBERON:0000955!1.15e-17!50;UBERON:0006238!1.15e-17!50;UBERON:0002616!4.14e-17!49;UBERON:0003080!2.88e-15!40;UBERON:0002020!4.75e-15!34;UBERON:0002780!1.20e-14!39;UBERON:0001890!1.20e-14!39;UBERON:0006240!1.20e-14!39;UBERON:0002791!7.07e-13!29;UBERON:0003528!7.07e-13!29;UBERON:0001893!7.07e-13!29;UBERON:0000153!2.32e-11!94;UBERON:0007811!8.04e-10!86;UBERON:0000956!3.88e-09!21;UBERON:0001869!3.88e-09!21;UBERON:0000203!3.88e-09!21;UBERON:0002619!6.10e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.36e-26,73;UBERON:0002346,1.56e-24,64;UBERON:0003075,1.56e-24,64;UBERON:0007284,1.56e-24,64;UBERON:0001016,1.79e-24,75;UBERON:0004121,2.79e-22,95;UBERON:0000924,2.79e-22,95;UBERON:0006601,2.79e-22,95;UBERON:0000073,6.58e-21,54;UBERON:0010371,3.83e-20,73;UBERON:0003056,6.49e-20,49;UBERON:0001049,3.68e-19,52;UBERON:0005068,3.68e-19,52;UBERON:0006241,3.68e-19,52;UBERON:0007135,3.68e-19,52;UBERON:0000955,2.50e-17,47;UBERON:0006238,2.50e-17,47;UBERON:0002616,9.92e-17,46;UBERON:0003080,2.43e-16,40;UBERON:0002020,1.00e-15,34;UBERON:0002780,1.16e-15,39;UBERON:0001890,1.16e-15,39;UBERON:0006240,1.16e-15,39;UBERON:0010314,3.17e-15,92;UBERON:0003528,2.50e-13,29;UBERON:0002791,2.50e-13,29;UBERON:0001893,2.50e-13,29;UBERON:0000956,3.18e-09,21;UBERON:0001869,3.18e-09,21;UBERON:0000203,3.18e-09,21;UBERON:0002619,7.68e-07,17 | |||
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| |||
|short_description=p2@Akt3 | |||
}} |
Revision as of 19:51, 13 September 2013
Short description: | p2@Akt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Akt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3253 |
Association with transcript: | 0bp_to_ENSMUST00000111159_5end |
EntrezGene: | Akt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.00e-18 | 33 |
neuronal stem cell | 4.00e-18 | 33 |
neuroblast | 4.00e-18 | 33 |
electrically signaling cell | 4.00e-18 | 33 |
CNS neuron (sensu Vertebrata) | 6.32e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.32e-14 | 23 |
electrically responsive cell | 1.38e-13 | 39 |
electrically active cell | 1.38e-13 | 39 |
neural cell | 6.55e-11 | 43 |
ectodermal cell | 7.95e-11 | 44 |
neurectodermal cell | 7.95e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.36e-26 | 73 |
neurectoderm | 1.56e-24 | 64 |
neural plate | 1.56e-24 | 64 |
presumptive neural plate | 1.56e-24 | 64 |
nervous system | 1.79e-24 | 75 |
ectoderm-derived structure | 2.79e-22 | 95 |
ectoderm | 2.79e-22 | 95 |
presumptive ectoderm | 2.79e-22 | 95 |
regional part of nervous system | 6.58e-21 | 54 |
ecto-epithelium | 3.83e-20 | 73 |
pre-chordal neural plate | 6.49e-20 | 49 |
neural tube | 3.68e-19 | 52 |
neural rod | 3.68e-19 | 52 |
future spinal cord | 3.68e-19 | 52 |
neural keel | 3.68e-19 | 52 |
brain | 2.50e-17 | 47 |
future brain | 2.50e-17 | 47 |
regional part of brain | 9.92e-17 | 46 |
anterior neural tube | 2.43e-16 | 40 |
gray matter | 1.00e-15 | 34 |
regional part of forebrain | 1.16e-15 | 39 |
forebrain | 1.16e-15 | 39 |
future forebrain | 1.16e-15 | 39 |
structure with developmental contribution from neural crest | 3.17e-15 | 92 |
brain grey matter | 2.50e-13 | 29 |
regional part of telencephalon | 2.50e-13 | 29 |
telencephalon | 2.50e-13 | 29 |
cerebral cortex | 3.18e-09 | 21 |
cerebral hemisphere | 3.18e-09 | 21 |
pallium | 3.18e-09 | 21 |
regional part of cerebral cortex | 7.68e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.