FFCP PHASE1:Mm9::chr1:193541872..193541909,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226856|HGNC=|MCL_coexpression_id=3259|UniProt=Q3UZK0,Q91YX5,Q6A0A4|association_with_transcript=0bp_to_ENSMUST00000138494,NM_172266,uc007ecs.2_5end|description=CAGE_peak_2_at_Lpgat1_5end|id=chr1:193541872..193541909,+|ontology_enrichment_celltype=CL:0000117!4.73e-08!23;CL:0000337!4.73e-08!23;CL:0000540!1.40e-07!33;CL:0000047!1.40e-07!33;CL:0000031!1.40e-07!33;CL:0000404!1.40e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.72e-08,23;CL:0000337,4.72e-08,23;CL:0000540,1.40e-07,33;CL:0000047,1.40e-07,33;CL:0000031,1.40e-07,33;CL:0000404,1.40e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.77e-16!50;UBERON:0006238!1.77e-16!50;UBERON:0000033!2.14e-16!63;UBERON:0002616!6.37e-16!49;UBERON:0003056!1.43e-15!49;UBERON:0001017!1.94e-15!73;UBERON:0005743!1.94e-15!73;UBERON:0000153!2.35e-15!94;UBERON:0000073!6.05e-15!75;UBERON:0001016!6.05e-15!75;UBERON:0001049!1.93e-14!52;UBERON:0005068!1.93e-14!52;UBERON:0006241!1.93e-14!52;UBERON:0007135!1.93e-14!52;UBERON:0003080!6.65e-14!40;UBERON:0002791!9.89e-14!29;UBERON:0003528!9.89e-14!29;UBERON:0001893!9.89e-14!29;UBERON:0002780!2.53e-13!39;UBERON:0001890!2.53e-13!39;UBERON:0006240!2.53e-13!39;UBERON:0002020!3.15e-13!34;UBERON:0002346!4.58e-13!71;UBERON:0003075!4.58e-13!71;UBERON:0007284!4.58e-13!71;UBERON:0007811!7.55e-13!86;UBERON:0004121!3.38e-11!102;UBERON:0000924!3.38e-11!102;UBERON:0006601!3.38e-11!102;UBERON:0000956!6.20e-10!21;UBERON:0001869!6.20e-10!21;UBERON:0000203!6.20e-10!21;UBERON:0000025!1.65e-08!114;UBERON:0002619!1.95e-08!17;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10;UBERON:0004111!7.83e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.90e-16,64;UBERON:0003075,3.90e-16,64;UBERON:0007284,3.90e-16,64;UBERON:0000073,8.14e-16,54;UBERON:0003056,1.43e-15,49;UBERON:0010314,1.77e-15,92;UBERON:0001017,1.94e-15,73;UBERON:0001016,6.04e-15,75;UBERON:0000955,1.59e-14,47;UBERON:0006238,1.59e-14,47;UBERON:0001049,1.93e-14,52;UBERON:0005068,1.93e-14,52;UBERON:0006241,1.93e-14,52;UBERON:0007135,1.93e-14,52;UBERON:0002616,5.48e-14,46;UBERON:0003080,6.64e-14,40;UBERON:0003528,9.87e-14,29;UBERON:0002791,9.87e-14,29;UBERON:0001893,9.87e-14,29;UBERON:0002780,2.52e-13,39;UBERON:0001890,2.52e-13,39;UBERON:0006240,2.52e-13,39;UBERON:0004121,2.75e-13,95;UBERON:0000924,2.75e-13,95;UBERON:0006601,2.75e-13,95;UBERON:0002020,3.15e-13,34;UBERON:0010371,3.55e-13,73;UBERON:0000956,6.20e-10,21;UBERON:0001869,6.20e-10,21;UBERON:0000203,6.20e-10,21;UBERON:0000025,1.64e-08,114;UBERON:0002619,1.94e-08,17;UBERON:0002021,9.73e-08,10;UBERON:0000411,9.73e-08,10;UBERON:0001950,9.73e-08,10;UBERON:0004111,7.90e-07,122|phase1_expression=5.92550734287738,0.697950815278722,1.81999695755814,0.90739263392049,2.00358291978539,1.6787927191189,0.700837921786577,3.22808308603941,1.267098499365,0.936258105287974,6.16384685611818,4.30769658574817,4.62241970814255,2.53519167015092,4.66353666541928,1.21485160433896,0,15.1421839371954,15.3568165638427,14.8536378129311,6.12311689087702,5.06383851124515,5.74639536105658,1.75991665072747,1.60586496747019,1.14846392823004,1.29228598847722,0.861884930743556,0.950117097281869,1.00812051903972,0.886922042621219,0,0,0,2.02196133825892,3.15845826181135,3.47087905646027,7.95210098400125,5.4693474116666,10.470474879476,5.88231488031014,8.19654581950135,10.1957174136542,4.90997590104751,6.48812359804893,7.15832333430558,3.9119567217402,3.05235218932625,3.07560655828261,6.9994763666742,8.39918529752175,1.43752564364972,12.5836954543302,6.5282592781021,4.03312558970957,5.91696702882678,6.5902691185914,7.73508138416164,13.7575193384526,7.93486468908049,8.23980824558033,6.09920157724438,6.22506357277798,3.5995988691256,5.93319817540185,5.6838409195688,4.19440154725767,3.84218305321555,13.3759599877936,7.96535036156975,13.0401476037857,11.1403883917483,4.41737081903227,14.8213867050094,11.3097655801519,15.6267193723704,25.3266526298594,24.6436562504412,22.5801603886678,12.5291973343684,14.729510619988,15.106487746146,12.0048689570594,10.6924895906019,14.0574387954665,5.89257170947335,8.39992916714707,13.047961207771,5.83091688665517,6.42358260907677,5.50742528533188,3.44169550792555,1.3599426674155,0.539703191637817,3.89865850468601,2.68816132258401,3.7919993435573,9.20323741921512,10.9110121933205,10.9535268098205,5.91542363062058,11.5493829672886,15.2883143823987,14.2213340630666,4.32982082022428,6.08063677140237,9.0994400102661,3.08296475241462,11.9111426477699,4.00793775475027,4.68410382268567,4.56698217468212,4.84292544237723,5.72746034099966,6.58496759959947,3.64433114856059,1.48316980640624,2.4581890676385,4.42305275974937,6.63244084784378,3.97514733228708,8.24287930329878,0,10.8328894894272,9.63454851341893,3.0654846625031,4.79260498023681,5.39912457894067,2.1601938602421,17.8250860891739,23.7900313465686,13.9476330845279,24.6830534673033,23.5258220743904,22.2333207678729,21.5780879880118,9.57290020192973,5.59831367745419,6.06534620240819,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| ||
|EntrezGene=226856 | |||
|HGNC= | |||
|MCL_coexpression_id=3259 | |||
|UniProt=Q3UZK0,Q91YX5,Q6A0A4 | |||
|association_with_transcript=0bp_to_ENSMUST00000138494,NM_172266,uc007ecs.2_5end | |||
|description=CAGE_peak_2_at_Lpgat1_5end | |||
|id=chr1:193541872..193541909,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.73e-08!23;CL:0000337!4.73e-08!23;CL:0000540!1.40e-07!33;CL:0000047!1.40e-07!33;CL:0000031!1.40e-07!33;CL:0000404!1.40e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.72e-08,23;CL:0000337,4.72e-08,23;CL:0000540,1.40e-07,33;CL:0000047,1.40e-07,33;CL:0000031,1.40e-07,33;CL:0000404,1.40e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.77e-16!50;UBERON:0006238!1.77e-16!50;UBERON:0000033!2.14e-16!63;UBERON:0002616!6.37e-16!49;UBERON:0003056!1.43e-15!49;UBERON:0001017!1.94e-15!73;UBERON:0005743!1.94e-15!73;UBERON:0000153!2.35e-15!94;UBERON:0000073!6.05e-15!75;UBERON:0001016!6.05e-15!75;UBERON:0001049!1.93e-14!52;UBERON:0005068!1.93e-14!52;UBERON:0006241!1.93e-14!52;UBERON:0007135!1.93e-14!52;UBERON:0003080!6.65e-14!40;UBERON:0002791!9.89e-14!29;UBERON:0003528!9.89e-14!29;UBERON:0001893!9.89e-14!29;UBERON:0002780!2.53e-13!39;UBERON:0001890!2.53e-13!39;UBERON:0006240!2.53e-13!39;UBERON:0002020!3.15e-13!34;UBERON:0002346!4.58e-13!71;UBERON:0003075!4.58e-13!71;UBERON:0007284!4.58e-13!71;UBERON:0007811!7.55e-13!86;UBERON:0004121!3.38e-11!102;UBERON:0000924!3.38e-11!102;UBERON:0006601!3.38e-11!102;UBERON:0000956!6.20e-10!21;UBERON:0001869!6.20e-10!21;UBERON:0000203!6.20e-10!21;UBERON:0000025!1.65e-08!114;UBERON:0002619!1.95e-08!17;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10;UBERON:0004111!7.83e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.90e-16,64;UBERON:0003075,3.90e-16,64;UBERON:0007284,3.90e-16,64;UBERON:0000073,8.14e-16,54;UBERON:0003056,1.43e-15,49;UBERON:0010314,1.77e-15,92;UBERON:0001017,1.94e-15,73;UBERON:0001016,6.04e-15,75;UBERON:0000955,1.59e-14,47;UBERON:0006238,1.59e-14,47;UBERON:0001049,1.93e-14,52;UBERON:0005068,1.93e-14,52;UBERON:0006241,1.93e-14,52;UBERON:0007135,1.93e-14,52;UBERON:0002616,5.48e-14,46;UBERON:0003080,6.64e-14,40;UBERON:0003528,9.87e-14,29;UBERON:0002791,9.87e-14,29;UBERON:0001893,9.87e-14,29;UBERON:0002780,2.52e-13,39;UBERON:0001890,2.52e-13,39;UBERON:0006240,2.52e-13,39;UBERON:0004121,2.75e-13,95;UBERON:0000924,2.75e-13,95;UBERON:0006601,2.75e-13,95;UBERON:0002020,3.15e-13,34;UBERON:0010371,3.55e-13,73;UBERON:0000956,6.20e-10,21;UBERON:0001869,6.20e-10,21;UBERON:0000203,6.20e-10,21;UBERON:0000025,1.64e-08,114;UBERON:0002619,1.94e-08,17;UBERON:0002021,9.73e-08,10;UBERON:0000411,9.73e-08,10;UBERON:0001950,9.73e-08,10;UBERON:0004111,7.90e-07,122 | |||
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| |||
|short_description=p2@Lpgat1 | |||
}} |
Revision as of 20:06, 13 September 2013
Short description: | p2@Lpgat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lpgat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3259 |
Association with transcript: | 0bp_to_ENSMUST00000138494, NM_172266, uc007ecs.2_5end |
EntrezGene: | Lpgat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.72e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.72e-08 | 23 |
neuron | 1.40e-07 | 33 |
neuronal stem cell | 1.40e-07 | 33 |
neuroblast | 1.40e-07 | 33 |
electrically signaling cell | 1.40e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.