FFCP PHASE1:Mm9::chr2:164286731..164286784,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66460|HGNC=|MCL_coexpression_id=986|UniProt=|association_with_transcript=0bp_to_uc008nut.1_5end|description=CAGE_peak_3_at_Sys1_5end|id=chr2:164286731..164286784,+|ontology_enrichment_celltype=CL:0000055!6.90e-11!50;CL:0002319!4.32e-10!43;CL:0000221!4.52e-10!44;CL:0000133!4.52e-10!44;CL:0000117!3.51e-08!23;CL:0000337!3.51e-08!23;CL:0002321!4.30e-08!70;CL:0000220!4.30e-08!70;CL:0000393!4.11e-07!39;CL:0000211!4.11e-07!39|ontology_enrichment_celltype_v019_2=CL:0002319,5.43e-10,43;CL:0000221,5.66e-10,44;CL:0000133,5.66e-10,44;CL:0000117,4.40e-08,23;CL:0000337,4.40e-08,23;CL:0002321,5.33e-08,70;CL:0000393,4.74e-07,39;CL:0000211,4.74e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.26e-25!73;UBERON:0005743!1.26e-25!73;UBERON:0000073!2.39e-24!75;UBERON:0001016!2.39e-24!75;UBERON:0001049!8.01e-22!52;UBERON:0005068!8.01e-22!52;UBERON:0006241!8.01e-22!52;UBERON:0007135!8.01e-22!52;UBERON:0000955!1.03e-21!50;UBERON:0006238!1.03e-21!50;UBERON:0002616!2.67e-21!49;UBERON:0002346!6.96e-19!71;UBERON:0003075!6.96e-19!71;UBERON:0007284!6.96e-19!71;UBERON:0004121!1.20e-18!102;UBERON:0000924!1.20e-18!102;UBERON:0006601!1.20e-18!102;UBERON:0000033!1.80e-18!63;UBERON:0003080!9.10e-18!40;UBERON:0002780!2.33e-17!39;UBERON:0001890!2.33e-17!39;UBERON:0006240!2.33e-17!39;UBERON:0003056!1.62e-15!49;UBERON:0002020!7.16e-15!34;UBERON:0002791!1.53e-13!29;UBERON:0003528!1.53e-13!29;UBERON:0001893!1.53e-13!29;UBERON:0004111!2.64e-11!122;UBERON:0000025!6.50e-11!114;UBERON:0000956!8.04e-10!21;UBERON:0001869!8.04e-10!21;UBERON:0000203!8.04e-10!21;UBERON:0002619!2.50e-08!17;UBERON:0000475!3.91e-08!200;UBERON:0002021!6.41e-07!10;UBERON:0000411!6.41e-07!10;UBERON:0001950!6.41e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.05e-25,73;UBERON:0001016,2.35e-24,75;UBERON:0000073,7.17e-23,54;UBERON:0001049,7.59e-22,52;UBERON:0005068,7.59e-22,52;UBERON:0006241,7.59e-22,52;UBERON:0007135,7.59e-22,52;UBERON:0000955,1.42e-20,47;UBERON:0006238,1.42e-20,47;UBERON:0002616,3.65e-20,46;UBERON:0002346,1.04e-19,64;UBERON:0003075,1.04e-19,64;UBERON:0007284,1.04e-19,64;UBERON:0004121,9.77e-19,95;UBERON:0000924,9.77e-19,95;UBERON:0006601,9.77e-19,95;UBERON:0003080,9.62e-18,40;UBERON:0002780,2.49e-17,39;UBERON:0001890,2.49e-17,39;UBERON:0006240,2.49e-17,39;UBERON:0010371,1.93e-16,73;UBERON:0003056,1.69e-15,49;UBERON:0002020,8.08e-15,34;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0004111,3.24e-11,122;UBERON:0000025,8.80e-11,114;UBERON:0010314,8.90e-11,92;UBERON:0000956,1.03e-09,21;UBERON:0001869,1.03e-09,21;UBERON:0000203,1.03e-09,21;UBERON:0002619,3.33e-08,17;UBERON:0002021,5.56e-07,10;UBERON:0000411,5.56e-07,10;UBERON:0001950,5.56e-07,10|phase1_expression=3.20297694209588,3.14077866875425,0.454999239389536,1.51232105653415,0.500895729946347,0.671517087647559,2.80335168714631,0.645616617207881,0.703943610758334,0.70219357896598,0.171217968225505,0.0797721589953364,0.684802919724823,0.174840804837995,1.66554880907831,1.41732687172878,0,0.630924330716475,0.548457734422955,0.42438965179803,4.76242424845991,0.595745707205312,0.261199789138935,0.95995453676044,1.60586496747019,0.57423196411502,2.58457197695445,1.72376986148711,1.90023419456374,3.02436155711917,2.21730510655305,3.81018404075779,3.69038872550742,0,0.866554859253824,0.831173226792462,1.42918549383658,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.485510353031154,4.78407908307194,4.8660926985367,4.40512205188036,22.6893489860931,15.4797861030117,15.5977189741475,22.9427280907654,7.55926676776958,17.2503077237966,0,0,0,1.28629718017973,2.57880095944881,3.09403255366465,5.86717736492834,6.34789175126439,8.23980824558033,7.11573517345177,3.55717918444456,1.7997994345628,3.9554654502679,2.1314403448383,16.4780060785123,42.264013585371,4.76972216618997,6.48028503992115,7.15104868594699,2.57085885963423,6.84692476950002,5.38959516545798,4.12135525378416,0.919218786610021,7.70811166995721,4.72443150915195,5.22262213071228,5.93488294785872,5.76372154695181,7.29278718779464,9.49222196604695,8.4414391504752,5.50073691996516,5.30331453852602,5.55249555116501,5.59198337475902,0.681535739998656,1.88928900266964,3.76823835312181,6.88339101585109,8.83962733820076,3.2382191498269,5.19821133958135,5.37632264516803,5.05599912474307,2.21559419351475,2.33807404142582,1.41335829804136,2.53518155598025,1.28326477414318,5.09610479413291,0,3.46385665617943,2.53359865475099,3.53867111510348,5.59501010623394,1.03575153458869,1.92974780784272,2.4287945747259,2.13125834818499,3.22861696158482,2.26083960828934,1.88141931417128,2.51333182659351,1.73036477414062,3.18118585223806,0.884610551949874,0.970601099684455,0.220841518460394,0,1.86391761218122,3.80615036115011,3.56059401582874,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,5.84183493678809,13.7250180845588,6.03140890141749,6.08385120672968,4.34716277461562,5.81806524766768,7.30085683804909,3.56437773476107,1.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| ||
|EntrezGene=66460 | |||
|HGNC= | |||
|MCL_coexpression_id=986 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008nut.1_5end | |||
|description=CAGE_peak_3_at_Sys1_5end | |||
|id=chr2:164286731..164286784,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.90e-11!50;CL:0002319!4.32e-10!43;CL:0000221!4.52e-10!44;CL:0000133!4.52e-10!44;CL:0000117!3.51e-08!23;CL:0000337!3.51e-08!23;CL:0002321!4.30e-08!70;CL:0000220!4.30e-08!70;CL:0000393!4.11e-07!39;CL:0000211!4.11e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.43e-10,43;CL:0000221,5.66e-10,44;CL:0000133,5.66e-10,44;CL:0000117,4.40e-08,23;CL:0000337,4.40e-08,23;CL:0002321,5.33e-08,70;CL:0000393,4.74e-07,39;CL:0000211,4.74e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.26e-25!73;UBERON:0005743!1.26e-25!73;UBERON:0000073!2.39e-24!75;UBERON:0001016!2.39e-24!75;UBERON:0001049!8.01e-22!52;UBERON:0005068!8.01e-22!52;UBERON:0006241!8.01e-22!52;UBERON:0007135!8.01e-22!52;UBERON:0000955!1.03e-21!50;UBERON:0006238!1.03e-21!50;UBERON:0002616!2.67e-21!49;UBERON:0002346!6.96e-19!71;UBERON:0003075!6.96e-19!71;UBERON:0007284!6.96e-19!71;UBERON:0004121!1.20e-18!102;UBERON:0000924!1.20e-18!102;UBERON:0006601!1.20e-18!102;UBERON:0000033!1.80e-18!63;UBERON:0003080!9.10e-18!40;UBERON:0002780!2.33e-17!39;UBERON:0001890!2.33e-17!39;UBERON:0006240!2.33e-17!39;UBERON:0003056!1.62e-15!49;UBERON:0002020!7.16e-15!34;UBERON:0002791!1.53e-13!29;UBERON:0003528!1.53e-13!29;UBERON:0001893!1.53e-13!29;UBERON:0004111!2.64e-11!122;UBERON:0000025!6.50e-11!114;UBERON:0000956!8.04e-10!21;UBERON:0001869!8.04e-10!21;UBERON:0000203!8.04e-10!21;UBERON:0002619!2.50e-08!17;UBERON:0000475!3.91e-08!200;UBERON:0002021!6.41e-07!10;UBERON:0000411!6.41e-07!10;UBERON:0001950!6.41e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.05e-25,73;UBERON:0001016,2.35e-24,75;UBERON:0000073,7.17e-23,54;UBERON:0001049,7.59e-22,52;UBERON:0005068,7.59e-22,52;UBERON:0006241,7.59e-22,52;UBERON:0007135,7.59e-22,52;UBERON:0000955,1.42e-20,47;UBERON:0006238,1.42e-20,47;UBERON:0002616,3.65e-20,46;UBERON:0002346,1.04e-19,64;UBERON:0003075,1.04e-19,64;UBERON:0007284,1.04e-19,64;UBERON:0004121,9.77e-19,95;UBERON:0000924,9.77e-19,95;UBERON:0006601,9.77e-19,95;UBERON:0003080,9.62e-18,40;UBERON:0002780,2.49e-17,39;UBERON:0001890,2.49e-17,39;UBERON:0006240,2.49e-17,39;UBERON:0010371,1.93e-16,73;UBERON:0003056,1.69e-15,49;UBERON:0002020,8.08e-15,34;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0004111,3.24e-11,122;UBERON:0000025,8.80e-11,114;UBERON:0010314,8.90e-11,92;UBERON:0000956,1.03e-09,21;UBERON:0001869,1.03e-09,21;UBERON:0000203,1.03e-09,21;UBERON:0002619,3.33e-08,17;UBERON:0002021,5.56e-07,10;UBERON:0000411,5.56e-07,10;UBERON:0001950,5.56e-07,10 | |||
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| |||
|short_description=p3@Sys1 | |||
}} |
Revision as of 22:52, 13 September 2013
Short description: | p3@Sys1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sys1_5end |
Coexpression cluster: | MCL_coexpression_mm9:986 |
Association with transcript: | 0bp_to_uc008nut.1_5end |
EntrezGene: | Sys1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.43e-10 | 43 |
ectodermal cell | 5.66e-10 | 44 |
neurectodermal cell | 5.66e-10 | 44 |
CNS neuron (sensu Vertebrata) | 4.40e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.40e-08 | 23 |
embryonic cell | 5.33e-08 | 70 |
electrically responsive cell | 4.74e-07 | 39 |
electrically active cell | 4.74e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.