FFCP PHASE1:Mm9::chr2:25316426..25316451,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227622|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128560_5end|description=CAGE_peak_2_at_BC029214_5end|id=chr2:25316426..25316451,-|ontology_enrichment_celltype=CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23;CL:0000055!8.08e-09!50;CL:0000221!1.64e-08!44;CL:0000133!1.64e-08!44;CL:0002319!2.42e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-11,23;CL:0000337,2.93e-11,23;CL:0000221,1.72e-08,44;CL:0000133,1.72e-08,44;CL:0002319,2.54e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.46e-21!52;UBERON:0005068!1.46e-21!52;UBERON:0006241!1.46e-21!52;UBERON:0007135!1.46e-21!52;UBERON:0001017!4.07e-21!73;UBERON:0005743!4.07e-21!73;UBERON:0000955!8.04e-20!50;UBERON:0006238!8.04e-20!50;UBERON:0002616!1.22e-19!49;UBERON:0000073!3.35e-19!75;UBERON:0001016!3.35e-19!75;UBERON:0000033!8.35e-18!63;UBERON:0002020!1.36e-16!34;UBERON:0004121!5.76e-16!102;UBERON:0000924!5.76e-16!102;UBERON:0006601!5.76e-16!102;UBERON:0002346!6.55e-16!71;UBERON:0003075!6.55e-16!71;UBERON:0007284!6.55e-16!71;UBERON:0003080!3.04e-15!40;UBERON:0002780!3.23e-15!39;UBERON:0001890!3.23e-15!39;UBERON:0006240!3.23e-15!39;UBERON:0002791!1.17e-13!29;UBERON:0003528!1.17e-13!29;UBERON:0001893!1.17e-13!29;UBERON:0003056!2.43e-13!49;UBERON:0004111!7.90e-13!122;UBERON:0000025!1.48e-11!114;UBERON:0000956!3.07e-10!21;UBERON:0001869!3.07e-10!21;UBERON:0000203!3.07e-10!21;UBERON:0007811!6.34e-09!86;UBERON:0002619!1.70e-08!17;UBERON:0000153!3.85e-07!94;UBERON:0003076!4.27e-07!12;UBERON:0003057!4.27e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.34e-23,54;UBERON:0001049,1.45e-21,52;UBERON:0005068,1.45e-21,52;UBERON:0006241,1.45e-21,52;UBERON:0007135,1.45e-21,52;UBERON:0001017,4.33e-21,73;UBERON:0001016,3.55e-19,75;UBERON:0000955,1.03e-18,47;UBERON:0006238,1.03e-18,47;UBERON:0002616,1.54e-18,46;UBERON:0002346,1.64e-17,64;UBERON:0003075,1.64e-17,64;UBERON:0007284,1.64e-17,64;UBERON:0004121,5.83e-17,95;UBERON:0000924,5.83e-17,95;UBERON:0006601,5.83e-17,95;UBERON:0002020,1.35e-16,34;UBERON:0010371,2.66e-16,73;UBERON:0003080,3.03e-15,40;UBERON:0002780,3.22e-15,39;UBERON:0001890,3.22e-15,39;UBERON:0006240,3.22e-15,39;UBERON:0003528,1.16e-13,29;UBERON:0002791,1.16e-13,29;UBERON:0001893,1.16e-13,29;UBERON:0010314,1.39e-13,92;UBERON:0003056,2.42e-13,49;UBERON:0004111,8.28e-13,122;UBERON:0000025,1.55e-11,114;UBERON:0000956,3.07e-10,21;UBERON:0001869,3.07e-10,21;UBERON:0000203,3.07e-10,21;UBERON:0002619,1.69e-08,17;UBERON:0003076,4.27e-07,12;UBERON:0003057,4.27e-07,12|phase1_expression=10.7299727560212,12.2141392673776,10.9199817453489,5.14189159221611,10.5188103288733,6.71517087647559,3.27057696833736,10.3298658753261,3.51971805379167,7.0219357896598,0.34243593645101,1.35612670292072,8.73123722649149,12.4136971434976,0.999329285446988,1.61980213911861,0,3.78554598429885,4.9361196098066,5.09267582157636,10.3752813984305,7.94327609607082,8.8807928307238,4.47978783821539,6.8822784320151,17.8011908875656,7.75371593086335,12.7128027284675,8.36103045608045,7.56090389279792,8.20402889424627,3.81018404075779,2.46025915033828,0,4.91047753577167,4.98703936075477,4.69589519403449,10.0447591376858,9.37602413428561,6.28228492768558,11.7646297606203,15.7100461540443,7.2826552954673,23.6686017794085,20.2753862439029,10.8292583775392,43.8139152834902,32.0496979879256,34.930103054781,27.2201858703997,16.7983705950435,14.3752564364972,4.36234775750115,7.97898356212479,2.35265659399725,4.11615097657515,5.15760191889762,7.73508138416164,24.8849246857305,27.5075309221457,27.2547503507657,10.165335962074,10.6715375533337,0.899899717281399,0.988866362566974,0.7104801149461,11.085204089181,30.7374644257244,13.3759599877936,19.0358373047684,20.1911962897327,23.7090317055157,30.0381215694194,15.3113499018693,9.10531974673246,22.0612508786405,15.4162233399144,14.4286692036262,11.0596703944495,24.0033043668953,28.361169516747,30.2129754922921,15.355064945076,10.1297269805702,10.2374826010463,19.1508580557884,19.6472919502762,28.1463163196204,1.28734528666413,1.5870027622425,7.53647670624362,13.7667820317022,17.6792546764015,18.3499085156858,9.74664626171504,10.7526452903361,10.6737759300131,6.30592193538814,7.01422212427746,4.24007489412408,10.4224130634744,1.28326477414318,2.54805239706646,0,1.08245520505607,1.52015919285059,1.01104889002957,7.30776830201984,1.8125651855302,9.35185476108396,5.55153045651635,3.95805121805784,6.22661842591358,6.17962826265753,6.82014501387088,11.0586600370114,10.1349936771093,26.0278842455841,3.5384422077995,9.86777784679196,2.87093973998512,2.90925151881133,5.59175283654366,34.255353250351,39.1665341741161,7.40825460104915,4.31334448221313,2.99951365496704,4.70159840170339,9.43681028250383,16.0125210986519,23.9999812535571,19.468323861535,21.7358138730781,15.1685272528479,20.766881672673,9.26738211037878,9.95255764880744,33.8648496301124,15.1518136238261,2.34216797332867,6.43725892413724,5.76198815377118,7.38453607395004,6.87168641428411,7.6868232170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| ||
|EntrezGene=227622 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128560_5end | |||
|description=CAGE_peak_2_at_BC029214_5end | |||
|id=chr2:25316426..25316451,- | |||
|ontology_enrichment_celltype=CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23;CL:0000055!8.08e-09!50;CL:0000221!1.64e-08!44;CL:0000133!1.64e-08!44;CL:0002319!2.42e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-11,23;CL:0000337,2.93e-11,23;CL:0000221,1.72e-08,44;CL:0000133,1.72e-08,44;CL:0002319,2.54e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.46e-21!52;UBERON:0005068!1.46e-21!52;UBERON:0006241!1.46e-21!52;UBERON:0007135!1.46e-21!52;UBERON:0001017!4.07e-21!73;UBERON:0005743!4.07e-21!73;UBERON:0000955!8.04e-20!50;UBERON:0006238!8.04e-20!50;UBERON:0002616!1.22e-19!49;UBERON:0000073!3.35e-19!75;UBERON:0001016!3.35e-19!75;UBERON:0000033!8.35e-18!63;UBERON:0002020!1.36e-16!34;UBERON:0004121!5.76e-16!102;UBERON:0000924!5.76e-16!102;UBERON:0006601!5.76e-16!102;UBERON:0002346!6.55e-16!71;UBERON:0003075!6.55e-16!71;UBERON:0007284!6.55e-16!71;UBERON:0003080!3.04e-15!40;UBERON:0002780!3.23e-15!39;UBERON:0001890!3.23e-15!39;UBERON:0006240!3.23e-15!39;UBERON:0002791!1.17e-13!29;UBERON:0003528!1.17e-13!29;UBERON:0001893!1.17e-13!29;UBERON:0003056!2.43e-13!49;UBERON:0004111!7.90e-13!122;UBERON:0000025!1.48e-11!114;UBERON:0000956!3.07e-10!21;UBERON:0001869!3.07e-10!21;UBERON:0000203!3.07e-10!21;UBERON:0007811!6.34e-09!86;UBERON:0002619!1.70e-08!17;UBERON:0000153!3.85e-07!94;UBERON:0003076!4.27e-07!12;UBERON:0003057!4.27e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.34e-23,54;UBERON:0001049,1.45e-21,52;UBERON:0005068,1.45e-21,52;UBERON:0006241,1.45e-21,52;UBERON:0007135,1.45e-21,52;UBERON:0001017,4.33e-21,73;UBERON:0001016,3.55e-19,75;UBERON:0000955,1.03e-18,47;UBERON:0006238,1.03e-18,47;UBERON:0002616,1.54e-18,46;UBERON:0002346,1.64e-17,64;UBERON:0003075,1.64e-17,64;UBERON:0007284,1.64e-17,64;UBERON:0004121,5.83e-17,95;UBERON:0000924,5.83e-17,95;UBERON:0006601,5.83e-17,95;UBERON:0002020,1.35e-16,34;UBERON:0010371,2.66e-16,73;UBERON:0003080,3.03e-15,40;UBERON:0002780,3.22e-15,39;UBERON:0001890,3.22e-15,39;UBERON:0006240,3.22e-15,39;UBERON:0003528,1.16e-13,29;UBERON:0002791,1.16e-13,29;UBERON:0001893,1.16e-13,29;UBERON:0010314,1.39e-13,92;UBERON:0003056,2.42e-13,49;UBERON:0004111,8.28e-13,122;UBERON:0000025,1.55e-11,114;UBERON:0000956,3.07e-10,21;UBERON:0001869,3.07e-10,21;UBERON:0000203,3.07e-10,21;UBERON:0002619,1.69e-08,17;UBERON:0003076,4.27e-07,12;UBERON:0003057,4.27e-07,12 | |||
|phase1_expression=10.7299727560212,12.2141392673776,10.9199817453489,5.14189159221611,10.5188103288733,6.71517087647559,3.27057696833736,10.3298658753261,3.51971805379167,7.0219357896598,0.34243593645101,1.35612670292072,8.73123722649149,12.4136971434976,0.999329285446988,1.61980213911861,0,3.78554598429885,4.9361196098066,5.09267582157636,10.3752813984305,7.94327609607082,8.8807928307238,4.47978783821539,6.8822784320151,17.8011908875656,7.75371593086335,12.7128027284675,8.36103045608045,7.56090389279792,8.20402889424627,3.81018404075779,2.46025915033828,0,4.91047753577167,4.98703936075477,4.69589519403449,10.0447591376858,9.37602413428561,6.28228492768558,11.7646297606203,15.7100461540443,7.2826552954673,23.6686017794085,20.2753862439029,10.8292583775392,43.8139152834902,32.0496979879256,34.930103054781,27.2201858703997,16.7983705950435,14.3752564364972,4.36234775750115,7.97898356212479,2.35265659399725,4.11615097657515,5.15760191889762,7.73508138416164,24.8849246857305,27.5075309221457,27.2547503507657,10.165335962074,10.6715375533337,0.899899717281399,0.988866362566974,0.7104801149461,11.085204089181,30.7374644257244,13.3759599877936,19.0358373047684,20.1911962897327,23.7090317055157,30.0381215694194,15.3113499018693,9.10531974673246,22.0612508786405,15.4162233399144,14.4286692036262,11.0596703944495,24.0033043668953,28.361169516747,30.2129754922921,15.355064945076,10.1297269805702,10.2374826010463,19.1508580557884,19.6472919502762,28.1463163196204,1.28734528666413,1.5870027622425,7.53647670624362,13.7667820317022,17.6792546764015,18.3499085156858,9.74664626171504,10.7526452903361,10.6737759300131,6.30592193538814,7.01422212427746,4.24007489412408,10.4224130634744,1.28326477414318,2.54805239706646,0,1.08245520505607,1.52015919285059,1.01104889002957,7.30776830201984,1.8125651855302,9.35185476108396,5.55153045651635,3.95805121805784,6.22661842591358,6.17962826265753,6.82014501387088,11.0586600370114,10.1349936771093,26.0278842455841,3.5384422077995,9.86777784679196,2.87093973998512,2.90925151881133,5.59175283654366,34.255353250351,39.1665341741161,7.40825460104915,4.31334448221313,2.99951365496704,4.70159840170339,9.43681028250383,16.0125210986519,23.9999812535571,19.468323861535,21.7358138730781,15.1685272528479,20.766881672673,9.26738211037878,9.95255764880744,33.8648496301124,15.1518136238261,2.34216797332867,6.43725892413724,5.76198815377118,7.38453607395004,6.87168641428411,7.68682321709099,7.87094486301722,13.9699820199068,0.862271971731369,0.945530400839096,4.22282697993477,5.47989331068937,9.45360647367033,7.66154766348766,9.26019613835746,3.78165106955137,5.61770549850588,4.37491442095016,4.54661599032948,1.86413195281952,2.34526059981096,3.06105504483725,4.26140524053378,6.09969118416952,5.09081472528348,7.44108623201305,9.12129564758705,9.34122738937356,9.87359099480883,16.2525789438304,10.8632204791447,11.5497990066013,8.34290438105992,9.66286215074677,13.8791366052324,27.1668176681311,22.7988960258821,5.02456076660734,2.77274725695804,1.39342003116263,2.31961430379768,2.42020229548011,3.33567065767305,5.32631753115166,2.84717436926707,6.0938613247884,6.28338022000674,7.16243299348143,5.8489226135736,3.59527763461689,7.78096979548899,9.16049856970089,3.98302592001472,2.28497025219458,2.25415471346161,4.07302655690629,3.87904974335251,3.71719845418688,5.56481526693464,3.39503340353085,4.23896565171712,8.63780147452604,13.3403682189217,0.83422552858047,1.37591296579242,0.899448449539415,0.202860121388503,0.964708639009667,2.80088436959562,2.01387296215567,1.62135226775035,2.74561413188081,1.43768206527355,5.20997326735905,5.92871578917665,14.6495749209325,16.5045620440159,14.473305640901,11.0851914099963,3.03186258832776,1.46668478797823,2.71592137240301,2.58159273117352,3.51763140627813,3.80869825417622,9.17128144931655,5.2019597555043,6.86540537911202,5.58091690301205,9.66793556822854,6.90739927463582,7.95569822198314,0,0,8.85175691434265,8.27810238914197,10.7568895291821,12.0728037189969,7.54100748732707,8.07906967053994,4.41711507182759,4.29482618726302,4.73931475012158,0.955875191810208,3.34198011123591,2.26461224631066,8.09621403349789,8.18316402151673,5.53402889125133,10.6036034419196,7.94864477166304,10.8620018237026,10.2618784392753,10.5580878702423,13.2745138339963,5.34117399540959,3.32555912661226,9.24164890803901,12.4026795009925,9.53048958626175,11.1124166062335,10.5424781548477,7.48644494607915,15.8018378967908,26.3546521437497,17.5330423521918,14.9793426531667,4.50152735078276,9.44318391614108,9.43082954139006,10.6404140185364,9.63191615051181,12.0120785039548,23.4438010818241,5.39744928546534,8.89694697628045,17.8628002424519,7.74965388824956,7.10443477461984,4.70440814439616,5.37175548014114,5.9090723908222,6.12109756922687,9.08583979851498,3.41741761595705,3.30218988741156,2.96311243791539,1.69531611304222,1.91371918809435,3.66045077130436,9.68877050964975,7.41742697315387,8.84479832348312,17.184071124272,1.89801596148681,5.89626454667861,5.83228840437727,10.6635030967379,9.38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| |||
|short_description=p2@BC029214 | |||
}} | |||
Revision as of 23:26, 13 September 2013
| Short description: | p2@BC029214 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_BC029214_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000128560_5end |
| EntrezGene: | BC029214 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.93e-11 | 23 |
| neuroblast (sensu Vertebrata) | 2.93e-11 | 23 |
| ectodermal cell | 1.72e-08 | 44 |
| neurectodermal cell | 1.72e-08 | 44 |
| neural cell | 2.54e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
