FFCP PHASE1:Hg19::chr7:140017476..140017487,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C569|description=CAGE_peak_at_chr7:140017476..140017487,-|id=chr7:140017476..140017487,-|ontology_enrichment_celltype=CL:0002057!1.75e-85!42;CL:0002009!1.17e-82!65;CL:0000860!3.06e-79!45;CL:0000557!6.88e-79!71;CL:0000766!7.55e-77!76;CL:0002194!2.54e-76!63;CL:0000576!2.54e-76!63;CL:0000040!2.54e-76!63;CL:0000559!2.54e-76!63;CL:0000839!1.24e-71!70;CL:0000763!5.81e-55!112;CL:0000049!5.81e-55!112;CL:0000738!6.47e-54!140;CL:0002031!1.38e-48!124;CL:0002087!2.74e-48!119;CL:0000037!5.27e-42!172;CL:0000566!5.27e-42!172;CL:0002032!4.75e-40!165;CL:0000837!4.75e-40!165;CL:0000988!3.91e-39!182;CL:0000840!2.06e-15!5;CL:0001029!2.06e-15!5;CL:0000134!9.67e-15!358;CL:0002320!2.96e-14!365;CL:0000219!1.54e-12!390;CL:0000767!6.35e-12!3;CL:0000034!1.42e-10!444;CL:0000048!1.73e-10!430;CL:0000723!3.39e-10!436;CL:0000990!3.56e-10!8;CL:0001014!5.72e-09!2;CL:0001016!5.72e-09!2;CL:0000451!2.88e-08!10;CL:0002393!4.51e-07!9;CL:0002397!4.51e-07!9|ontology_enrichment_celltype_v019=CL:0000860;7.19e-71;33!CL:0002057;7.19e-71;33!CL:0000473;3.99e-50;39!CL:0000234;3.99e-50;39!CL:0000576;2.26e-44;48!CL:0000766;2.98e-28;69!CL:0001014;1.60e-16;2!CL:0001016;1.60e-16;2!CL:0002087;5.17e-15;104!CL:0000763;2.34e-13;100!CL:0002393;1.57e-12;6!CL:0002397;1.57e-12;6!CL:0000738;7.08e-10;136!CL:0000453;3.91e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,6.16e-85,42;CL:0002057,6.16e-85,42;CL:0000473,6.96e-74,48;CL:0000234,6.96e-74,48;CL:0002009,1.05e-67,61;CL:0000557,2.08e-61,67;CL:0002194,2.11e-58,59;CL:0000576,2.11e-58,59;CL:0000040,2.11e-58,59;CL:0000559,2.11e-58,59;CL:0000766,5.81e-52,72;CL:0000839,6.31e-52,66;CL:0000763,2.77e-40,108;CL:0000049,2.77e-40,108;CL:0000738,4.36e-34,136;CL:0002031,7.18e-33,120;CL:0002087,2.49e-31,115;CL:0000037,6.74e-27,168;CL:0002032,7.64e-26,161;CL:0000837,7.64e-26,161;CL:0000988,2.44e-25,177;CL:0001014,1.60e-16,2;CL:0001016,1.60e-16,2;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0002393,1.67e-08,9;CL:0002397,1.67e-08,9;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000453,3.92e-07,5|ontology_enrichment_development_v019=CL:0002057;1.51e-57;42!CL:0000049;3.54e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.70e-69!80;UBERON:0001474!1.25e-63!86;UBERON:0002390!4.08e-61!102;UBERON:0003061!4.08e-61!102;UBERON:0002193!8.02e-55!112;UBERON:0004765!7.46e-53!101;UBERON:0001434!7.46e-53!101;UBERON:0002405!2.61e-45!115;UBERON:0002204!2.67e-28!167;UBERON:0003081!9.79e-24!216;UBERON:0002384!1.37e-13!375;UBERON:0000926!1.66e-07!448;UBERON:0004120!1.66e-07!448;UBERON:0006603!1.66e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.44e-54,76;UBERON:0001474,1.21e-49,82;UBERON:0004765,5.95e-45,90;UBERON:0002390,9.59e-45,98;UBERON:0003061,9.59e-45,98;UBERON:0002405,2.13e-43,93;UBERON:0002193,2.72e-40,108;UBERON:0001434,3.95e-40,100;UBERON:0002204,1.36e-22,167;UBERON:0003081,1.03e-19,203;UBERON:0000926,2.80e-11,315;UBERON:0004120,2.80e-11,315;UBERON:0006603,2.80e-11,315;UBERON:0002384,5.43e-10,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.767658796194425,0.619264493264304,0,0,0,0,0,0,12.1878989877013,4.61252229181326,4.12320654360118,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,4.89077066947656,5.12321413058201,6.3850202069918,2.41321976515633,3.87290810150296,0,0.376484679085209,0,0.449446968890169,5.20342617030534,4.49300637906531,6.39337125799041,1.31940520074686,3.98927315243264,1.70489900213078,2.32167390902867,1.70215567407342,1.24564449799115,1.50749199154046,3.12889751052121,6.73285418585862,0.605399502633369,3.31449872388808,3.16462387440884,0.211255286311942,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:140017476..140017487,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C569 | |||
|description=CAGE_peak_at_chr7:140017476..140017487,- | |||
|id=chr7:140017476..140017487,- | |||
|ontology_enrichment_celltype=CL:0002057!1.75e-85!42;CL:0002009!1.17e-82!65;CL:0000860!3.06e-79!45;CL:0000557!6.88e-79!71;CL:0000766!7.55e-77!76;CL:0002194!2.54e-76!63;CL:0000576!2.54e-76!63;CL:0000040!2.54e-76!63;CL:0000559!2.54e-76!63;CL:0000839!1.24e-71!70;CL:0000763!5.81e-55!112;CL:0000049!5.81e-55!112;CL:0000738!6.47e-54!140;CL:0002031!1.38e-48!124;CL:0002087!2.74e-48!119;CL:0000037!5.27e-42!172;CL:0000566!5.27e-42!172;CL:0002032!4.75e-40!165;CL:0000837!4.75e-40!165;CL:0000988!3.91e-39!182;CL:0000840!2.06e-15!5;CL:0001029!2.06e-15!5;CL:0000134!9.67e-15!358;CL:0002320!2.96e-14!365;CL:0000219!1.54e-12!390;CL:0000767!6.35e-12!3;CL:0000034!1.42e-10!444;CL:0000048!1.73e-10!430;CL:0000723!3.39e-10!436;CL:0000990!3.56e-10!8;CL:0001014!5.72e-09!2;CL:0001016!5.72e-09!2;CL:0000451!2.88e-08!10;CL:0002393!4.51e-07!9;CL:0002397!4.51e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.19e-71;33!CL:0002057;7.19e-71;33!CL:0000473;3.99e-50;39!CL:0000234;3.99e-50;39!CL:0000576;2.26e-44;48!CL:0000766;2.98e-28;69!CL:0001014;1.60e-16;2!CL:0001016;1.60e-16;2!CL:0002087;5.17e-15;104!CL:0000763;2.34e-13;100!CL:0002393;1.57e-12;6!CL:0002397;1.57e-12;6!CL:0000738;7.08e-10;136!CL:0000453;3.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.16e-85,42;CL:0002057,6.16e-85,42;CL:0000473,6.96e-74,48;CL:0000234,6.96e-74,48;CL:0002009,1.05e-67,61;CL:0000557,2.08e-61,67;CL:0002194,2.11e-58,59;CL:0000576,2.11e-58,59;CL:0000040,2.11e-58,59;CL:0000559,2.11e-58,59;CL:0000766,5.81e-52,72;CL:0000839,6.31e-52,66;CL:0000763,2.77e-40,108;CL:0000049,2.77e-40,108;CL:0000738,4.36e-34,136;CL:0002031,7.18e-33,120;CL:0002087,2.49e-31,115;CL:0000037,6.74e-27,168;CL:0002032,7.64e-26,161;CL:0000837,7.64e-26,161;CL:0000988,2.44e-25,177;CL:0001014,1.60e-16,2;CL:0001016,1.60e-16,2;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0002393,1.67e-08,9;CL:0002397,1.67e-08,9;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000453,3.92e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-57;42!CL:0000049;3.54e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.70e-69!80;UBERON:0001474!1.25e-63!86;UBERON:0002390!4.08e-61!102;UBERON:0003061!4.08e-61!102;UBERON:0002193!8.02e-55!112;UBERON:0004765!7.46e-53!101;UBERON:0001434!7.46e-53!101;UBERON:0002405!2.61e-45!115;UBERON:0002204!2.67e-28!167;UBERON:0003081!9.79e-24!216;UBERON:0002384!1.37e-13!375;UBERON:0000926!1.66e-07!448;UBERON:0004120!1.66e-07!448;UBERON:0006603!1.66e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.44e-54,76;UBERON:0001474,1.21e-49,82;UBERON:0004765,5.95e-45,90;UBERON:0002390,9.59e-45,98;UBERON:0003061,9.59e-45,98;UBERON:0002405,2.13e-43,93;UBERON:0002193,2.72e-40,108;UBERON:0001434,3.95e-40,100;UBERON:0002204,1.36e-22,167;UBERON:0003081,1.03e-19,203;UBERON:0000926,2.80e-11,315;UBERON:0004120,2.80e-11,315;UBERON:0006603,2.80e-11,315;UBERON:0002384,5.43e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.767658796194425,0.619264493264304,0,0,0,0,0,0,12.1878989877013,4.61252229181326,4.12320654360118,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,4.89077066947656,5.12321413058201,6.3850202069918,2.41321976515633,3.87290810150296,0,0.376484679085209,0,0.449446968890169,5.20342617030534,4.49300637906531,6.39337125799041,1.31940520074686,3.98927315243264,1.70489900213078,2.32167390902867,1.70215567407342,1.24564449799115,1.50749199154046,3.12889751052121,6.73285418585862,0.605399502633369,3.31449872388808,3.16462387440884,0.211255286311942,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:140017476..140017487,- | |||
}} |
Revision as of 23:33, 13 September 2013
Short description: | p@chr7:140017476..140017487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:140017476..140017487, - |
Coexpression cluster: | C569_CD14_immature_CD19_Basophils_migratory_Dendritic_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.44e-54 | 76 |
bone element | 1.21e-49 | 82 |
skeletal element | 5.95e-45 | 90 |
hematopoietic system | 9.59e-45 | 98 |
blood island | 9.59e-45 | 98 |
immune system | 2.13e-43 | 93 |
hemolymphoid system | 2.72e-40 | 108 |
skeletal system | 3.95e-40 | 100 |
musculoskeletal system | 1.36e-22 | 167 |
lateral plate mesoderm | 1.03e-19 | 203 |
mesoderm | 2.80e-11 | 315 |
mesoderm-derived structure | 2.80e-11 | 315 |
presumptive mesoderm | 2.80e-11 | 315 |
connective tissue | 5.43e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.