FFCP PHASE1:Mm9::chr2:92229169..92229176,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=303|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:92229169..92229176,-|id=chr2:92229169..92229176,-|ontology_enrichment_celltype=CL:0000221!1.56e-17!44;CL:0000133!1.56e-17!44;CL:0000117!4.85e-17!23;CL:0000337!4.85e-17!23;CL:0002319!5.07e-17!43;CL:0000055!5.22e-16!50;CL:0000540!6.52e-14!33;CL:0000047!6.52e-14!33;CL:0000031!6.52e-14!33;CL:0000404!6.52e-14!33;CL:0000393!3.77e-12!39;CL:0000211!3.77e-12!39;CL:0002321!1.28e-07!70;CL:0000220!1.28e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-13,23;CL:0000337,4.14e-13,23;CL:0002319,9.26e-11,43;CL:0000540,1.84e-10,33;CL:0000047,1.84e-10,33;CL:0000031,1.84e-10,33;CL:0000404,1.84e-10,33;CL:0000221,1.84e-10,44;CL:0000133,1.84e-10,44;CL:0002610,2.12e-10,3;CL:0000393,1.48e-08,39;CL:0000211,1.48e-08,39;CL:0002611,1.63e-08,2;CL:0000878,2.43e-07,2;CL:0000129,2.43e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.33e-35!75;UBERON:0001016!1.33e-35!75;UBERON:0001017!9.09e-35!73;UBERON:0005743!9.09e-35!73;UBERON:0001049!1.44e-29!52;UBERON:0005068!1.44e-29!52;UBERON:0006241!1.44e-29!52;UBERON:0007135!1.44e-29!52;UBERON:0004121!1.13e-28!102;UBERON:0000924!1.13e-28!102;UBERON:0006601!1.13e-28!102;UBERON:0000955!3.13e-27!50;UBERON:0006238!3.13e-27!50;UBERON:0002616!1.93e-26!49;UBERON:0002020!1.35e-24!34;UBERON:0002346!2.21e-24!71;UBERON:0003075!2.21e-24!71;UBERON:0007284!2.21e-24!71;UBERON:0000033!7.03e-23!63;UBERON:0003080!4.60e-21!40;UBERON:0002780!1.62e-20!39;UBERON:0001890!1.62e-20!39;UBERON:0006240!1.62e-20!39;UBERON:0002791!6.89e-20!29;UBERON:0003528!6.89e-20!29;UBERON:0001893!6.89e-20!29;UBERON:0003056!2.15e-18!49;UBERON:0000956!3.38e-15!21;UBERON:0001869!3.38e-15!21;UBERON:0000203!3.38e-15!21;UBERON:0007811!8.62e-14!86;UBERON:0002619!2.23e-12!17;UBERON:0000153!9.64e-12!94;UBERON:0002021!1.34e-10!10;UBERON:0000411!1.34e-10!10;UBERON:0001950!1.34e-10!10;UBERON:0000025!2.66e-10!114;UBERON:0004111!5.18e-09!122;UBERON:0003076!6.49e-09!12;UBERON:0003057!6.49e-09!12;UBERON:0002240!6.46e-07!6;UBERON:0005174!6.46e-07!6;UBERON:0001137!6.46e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.18e-28,10;UBERON:0000411,2.18e-28,10;UBERON:0001950,2.18e-28,10;UBERON:0001017,3.04e-28,73;UBERON:0001016,2.22e-27,75;UBERON:0000073,6.27e-25,54;UBERON:0002020,8.49e-24,34;UBERON:0001049,3.20e-21,52;UBERON:0005068,3.20e-21,52;UBERON:0006241,3.20e-21,52;UBERON:0007135,3.20e-21,52;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0000956,1.15e-18,21;UBERON:0001869,1.15e-18,21;UBERON:0000203,1.15e-18,21;UBERON:0002346,1.71e-18,64;UBERON:0003075,1.71e-18,64;UBERON:0007284,1.71e-18,64;UBERON:0002619,4.39e-16,17;UBERON:0010371,9.63e-16,73;UBERON:0003528,2.29e-15,29;UBERON:0002791,2.29e-15,29;UBERON:0001893,2.29e-15,29;UBERON:0002240,3.38e-15,6;UBERON:0005174,3.38e-15,6;UBERON:0001137,3.38e-15,6;UBERON:0002780,8.36e-13,39;UBERON:0001890,8.36e-13,39;UBERON:0006240,8.36e-13,39;UBERON:0003080,2.02e-12,40;UBERON:0002616,2.35e-12,46;UBERON:0000955,4.92e-12,47;UBERON:0006238,4.92e-12,47;UBERON:0001948,6.70e-12,5;UBERON:0002315,6.70e-12,5;UBERON:0010314,1.07e-11,92;UBERON:0003076,1.69e-10,12;UBERON:0003057,1.69e-10,12;UBERON:0004684,2.12e-10,3;UBERON:0002275,2.12e-10,3;UBERON:0003056,1.10e-09,49;UBERON:0002256,1.63e-08,2;UBERON:0011216,6.46e-08,194;UBERON:0000025,1.17e-07,114;UBERON:0004111,6.52e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.436050312760893,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0.633831403506179,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,0.311068836925433,1.08004750665353,0.630974884054146,3.14216082844184,2.87129103237098,0.244981598429908,0.287536413054709,0.919218786610021,1.10115880999389,1.40456071893706,1.38245879930619,0.131886287730194,0.640413505216868,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,1.76777151284201,1.85083185038834,0.931997229126503,0.075726193333184,0.302286240427142,0,0.860423876981386,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,0,0.878342391034642,2.51336048176146,0,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,1.21677024134594,0.255715457330331,0.62336413367868,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,1.17131623288992,0.215423397732799,0.477937595905104,0,0,0,0.292255857911312,0,0.642642632843614,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,2.96680483216816,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,4.51801474093653,2.30162618253588,4.58316410751517,1.71853182343688,2.05524755931193,1.5107877947794,4.05013500139084,0.900642406448441,2.71885445390523,2.5888015587591,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr2:92229169..92229176,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:92229169..92229176,- | |||
|id=chr2:92229169..92229176,- | |||
|ontology_enrichment_celltype=CL:0000221!1.56e-17!44;CL:0000133!1.56e-17!44;CL:0000117!4.85e-17!23;CL:0000337!4.85e-17!23;CL:0002319!5.07e-17!43;CL:0000055!5.22e-16!50;CL:0000540!6.52e-14!33;CL:0000047!6.52e-14!33;CL:0000031!6.52e-14!33;CL:0000404!6.52e-14!33;CL:0000393!3.77e-12!39;CL:0000211!3.77e-12!39;CL:0002321!1.28e-07!70;CL:0000220!1.28e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-13,23;CL:0000337,4.14e-13,23;CL:0002319,9.26e-11,43;CL:0000540,1.84e-10,33;CL:0000047,1.84e-10,33;CL:0000031,1.84e-10,33;CL:0000404,1.84e-10,33;CL:0000221,1.84e-10,44;CL:0000133,1.84e-10,44;CL:0002610,2.12e-10,3;CL:0000393,1.48e-08,39;CL:0000211,1.48e-08,39;CL:0002611,1.63e-08,2;CL:0000878,2.43e-07,2;CL:0000129,2.43e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.33e-35!75;UBERON:0001016!1.33e-35!75;UBERON:0001017!9.09e-35!73;UBERON:0005743!9.09e-35!73;UBERON:0001049!1.44e-29!52;UBERON:0005068!1.44e-29!52;UBERON:0006241!1.44e-29!52;UBERON:0007135!1.44e-29!52;UBERON:0004121!1.13e-28!102;UBERON:0000924!1.13e-28!102;UBERON:0006601!1.13e-28!102;UBERON:0000955!3.13e-27!50;UBERON:0006238!3.13e-27!50;UBERON:0002616!1.93e-26!49;UBERON:0002020!1.35e-24!34;UBERON:0002346!2.21e-24!71;UBERON:0003075!2.21e-24!71;UBERON:0007284!2.21e-24!71;UBERON:0000033!7.03e-23!63;UBERON:0003080!4.60e-21!40;UBERON:0002780!1.62e-20!39;UBERON:0001890!1.62e-20!39;UBERON:0006240!1.62e-20!39;UBERON:0002791!6.89e-20!29;UBERON:0003528!6.89e-20!29;UBERON:0001893!6.89e-20!29;UBERON:0003056!2.15e-18!49;UBERON:0000956!3.38e-15!21;UBERON:0001869!3.38e-15!21;UBERON:0000203!3.38e-15!21;UBERON:0007811!8.62e-14!86;UBERON:0002619!2.23e-12!17;UBERON:0000153!9.64e-12!94;UBERON:0002021!1.34e-10!10;UBERON:0000411!1.34e-10!10;UBERON:0001950!1.34e-10!10;UBERON:0000025!2.66e-10!114;UBERON:0004111!5.18e-09!122;UBERON:0003076!6.49e-09!12;UBERON:0003057!6.49e-09!12;UBERON:0002240!6.46e-07!6;UBERON:0005174!6.46e-07!6;UBERON:0001137!6.46e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.18e-28,10;UBERON:0000411,2.18e-28,10;UBERON:0001950,2.18e-28,10;UBERON:0001017,3.04e-28,73;UBERON:0001016,2.22e-27,75;UBERON:0000073,6.27e-25,54;UBERON:0002020,8.49e-24,34;UBERON:0001049,3.20e-21,52;UBERON:0005068,3.20e-21,52;UBERON:0006241,3.20e-21,52;UBERON:0007135,3.20e-21,52;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0000956,1.15e-18,21;UBERON:0001869,1.15e-18,21;UBERON:0000203,1.15e-18,21;UBERON:0002346,1.71e-18,64;UBERON:0003075,1.71e-18,64;UBERON:0007284,1.71e-18,64;UBERON:0002619,4.39e-16,17;UBERON:0010371,9.63e-16,73;UBERON:0003528,2.29e-15,29;UBERON:0002791,2.29e-15,29;UBERON:0001893,2.29e-15,29;UBERON:0002240,3.38e-15,6;UBERON:0005174,3.38e-15,6;UBERON:0001137,3.38e-15,6;UBERON:0002780,8.36e-13,39;UBERON:0001890,8.36e-13,39;UBERON:0006240,8.36e-13,39;UBERON:0003080,2.02e-12,40;UBERON:0002616,2.35e-12,46;UBERON:0000955,4.92e-12,47;UBERON:0006238,4.92e-12,47;UBERON:0001948,6.70e-12,5;UBERON:0002315,6.70e-12,5;UBERON:0010314,1.07e-11,92;UBERON:0003076,1.69e-10,12;UBERON:0003057,1.69e-10,12;UBERON:0004684,2.12e-10,3;UBERON:0002275,2.12e-10,3;UBERON:0003056,1.10e-09,49;UBERON:0002256,1.63e-08,2;UBERON:0011216,6.46e-08,194;UBERON:0000025,1.17e-07,114;UBERON:0004111,6.52e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.436050312760893,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0.633831403506179,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,0.311068836925433,1.08004750665353,0.630974884054146,3.14216082844184,2.87129103237098,0.244981598429908,0.287536413054709,0.919218786610021,1.10115880999389,1.40456071893706,1.38245879930619,0.131886287730194,0.640413505216868,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,1.76777151284201,1.85083185038834,0.931997229126503,0.075726193333184,0.302286240427142,0,0.860423876981386,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,0,0.878342391034642,2.51336048176146,0,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,1.21677024134594,0.255715457330331,0.62336413367868,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,1.17131623288992,0.215423397732799,0.477937595905104,0,0,0,0.292255857911312,0,0.642642632843614,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,2.96680483216816,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,4.51801474093653,2.30162618253588,4.58316410751517,1.71853182343688,2.05524755931193,1.5107877947794,4.05013500139084,0.900642406448441,2.71885445390523,2.5888015587591,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr2:92229169..92229176,- | |||
}} |
Revision as of 00:54, 14 September 2013
Short description: | p@chr2:92229169..92229176, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:92229169..92229176, - |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.14e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.14e-13 | 23 |
neural cell | 9.26e-11 | 43 |
neuron | 1.84e-10 | 33 |
neuronal stem cell | 1.84e-10 | 33 |
neuroblast | 1.84e-10 | 33 |
electrically signaling cell | 1.84e-10 | 33 |
ectodermal cell | 1.84e-10 | 44 |
neurectodermal cell | 1.84e-10 | 44 |
raphe nuclei neuron | 2.12e-10 | 3 |
electrically responsive cell | 1.48e-08 | 39 |
electrically active cell | 1.48e-08 | 39 |
neuron of the dorsal spinal cord | 1.63e-08 | 2 |
central nervous system macrophage | 2.43e-07 | 2 |
microglial cell | 2.43e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.