FFCP PHASE1:Mm9::chr3:13473205..13473218,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76897|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=-1bp_to_uc008oqe.1_5end|description=CAGE_peak_4_at_Ralyl_5end|id=chr3:13473205..13473218,+|ontology_enrichment_celltype=CL:0000540!1.51e-15!33;CL:0000047!1.51e-15!33;CL:0000031!1.51e-15!33;CL:0000404!1.51e-15!33;CL:0000393!2.50e-11!39;CL:0000211!2.50e-11!39;CL:0002319!1.31e-10!43;CL:0000221!4.16e-10!44;CL:0000133!4.16e-10!44;CL:0000117!3.11e-09!23;CL:0000337!3.11e-09!23;CL:0000055!1.39e-07!50;CL:0000107!2.88e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.29e-23,33;CL:0000047,1.29e-23,33;CL:0000031,1.29e-23,33;CL:0000404,1.29e-23,33;CL:0000393,4.72e-19,39;CL:0000211,4.72e-19,39;CL:0002319,1.01e-16,43;CL:0000221,3.29e-16,44;CL:0000133,3.29e-16,44;CL:0000117,6.70e-14,23;CL:0000337,6.70e-14,23;CL:0000107,6.46e-10,9;CL:0002321,4.44e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.68e-28!75;UBERON:0001016!9.68e-28!75;UBERON:0004121!9.94e-28!102;UBERON:0000924!9.94e-28!102;UBERON:0006601!9.94e-28!102;UBERON:0001017!2.89e-27!73;UBERON:0005743!2.89e-27!73;UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0000033!2.71e-20!63;UBERON:0001049!5.77e-18!52;UBERON:0005068!5.77e-18!52;UBERON:0006241!5.77e-18!52;UBERON:0007135!5.77e-18!52;UBERON:0000955!6.51e-17!50;UBERON:0006238!6.51e-17!50;UBERON:0003056!1.21e-16!49;UBERON:0002616!4.35e-16!49;UBERON:0002020!6.41e-13!34;UBERON:0003080!3.73e-12!40;UBERON:0002780!2.08e-11!39;UBERON:0001890!2.08e-11!39;UBERON:0006240!2.08e-11!39;UBERON:0007811!9.06e-11!86;UBERON:0002791!8.47e-10!29;UBERON:0003528!8.47e-10!29;UBERON:0001893!8.47e-10!29;UBERON:0000153!8.61e-10!94;UBERON:0002021!3.15e-08!10;UBERON:0000411!3.15e-08!10;UBERON:0001950!3.15e-08!10;UBERON:0000010!2.37e-07!11;UBERON:0002410!2.88e-07!9;UBERON:0003076!7.54e-07!12;UBERON:0003057!7.54e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.30e-38,73;UBERON:0001016,1.56e-36,75;UBERON:0004121,2.75e-33,95;UBERON:0000924,2.75e-33,95;UBERON:0006601,2.75e-33,95;UBERON:0002346,1.21e-26,64;UBERON:0003075,1.21e-26,64;UBERON:0007284,1.21e-26,64;UBERON:0010371,9.62e-24,73;UBERON:0000073,3.10e-23,54;UBERON:0001049,1.27e-20,52;UBERON:0005068,1.27e-20,52;UBERON:0006241,1.27e-20,52;UBERON:0007135,1.27e-20,52;UBERON:0010314,3.64e-18,92;UBERON:0000955,5.13e-15,47;UBERON:0006238,5.13e-15,47;UBERON:0002020,5.85e-15,34;UBERON:0003076,1.65e-14,12;UBERON:0003057,1.65e-14,12;UBERON:0002616,1.01e-13,46;UBERON:0003056,9.84e-12,49;UBERON:0002021,2.16e-11,10;UBERON:0000411,2.16e-11,10;UBERON:0001950,2.16e-11,10;UBERON:0002240,2.03e-10,6;UBERON:0005174,2.03e-10,6;UBERON:0001137,2.03e-10,6;UBERON:0002410,6.46e-10,9;UBERON:0003080,8.25e-10,40;UBERON:0003528,1.72e-09,29;UBERON:0002791,1.72e-09,29;UBERON:0001893,1.72e-09,29;UBERON:0002780,1.02e-08,39;UBERON:0001890,1.02e-08,39;UBERON:0006240,1.02e-08,39;UBERON:0001948,1.25e-08,5;UBERON:0002315,1.25e-08,5;UBERON:0002950,3.06e-08,4;UBERON:0001891,3.06e-08,4;UBERON:0009616,3.06e-08,4;UBERON:0010286,3.06e-08,4;UBERON:0011216,5.69e-08,194;UBERON:0000010,6.83e-08,11;UBERON:0002619,1.31e-07,17;UBERON:0000956,4.20e-07,21;UBERON:0001869,4.20e-07,21;UBERON:0000203,4.20e-07,21;UBERON:0000013,6.08e-07,3|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0.411343300817216,0.42438965179803,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.42825492201902,2.42955395046775,0.244981598429908,0.0958454710182364,0,2.20231761998777,3.06449611404451,4.6081959976873,0.791317726381163,1.46380229763855,0,3.62937898701795,2.8138130501584,1.83357897332172,2.65165726926301,2.42031857358475,2.05039390407831,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0.376999773989026,0,0,0,0.161766849947409,0,0,0,40.9893115816166,52.1522299965503,0,0,0,0,5.09288173976397,0.915001205637253,0.753926112677186,1.56441888173049,2.55715457330331,5.194701113989,3.40706652442291,0,0,0,0.420883711772948,0.910843100738926,0.229902104433473,0.540186389416048,0.753524089178575,1.63287597963187,2.69038812598185,1.59292931751539,1.55222022443409,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0.308713837137853,0,0,0,0.928946687441754,0.257734922644187,0.403367049246685,0,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,2.81308047821288,0,0,2.52406575533005,3.12350995437311,2.58508077279359,0.238968797952552,0.668396022247182,2.26461224631066,2.83367491172426,3.50707029493574,7.11518000303742,8.9969968598106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0,0,0.532020700926821,0,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0,0,0.457556346413045,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,2.76195141904306,2.86447756719698,2.06223818812425,4.7955776383945,3.0215755895588,0.675022500231806,1.80128481289688,0.453142408984205,4.14208249401456,0.830298780673413,0.399024873401031,0.170733605754134,0,0.628839487883947,0.183843508450014,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.320125762024346,0.287177344778066,0.476293691283074,0.231768651889711,0.578727661391115,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.507687647350059,0,0.526139422875686,0.679020569229309,0,0.474540072496697,0.394017929502254,1.63692417267876,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p4@Ralyl}} | ||
|EntrezGene=76897 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_uc008oqe.1_5end | |||
|description=CAGE_peak_4_at_Ralyl_5end | |||
|id=chr3:13473205..13473218,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-15!33;CL:0000047!1.51e-15!33;CL:0000031!1.51e-15!33;CL:0000404!1.51e-15!33;CL:0000393!2.50e-11!39;CL:0000211!2.50e-11!39;CL:0002319!1.31e-10!43;CL:0000221!4.16e-10!44;CL:0000133!4.16e-10!44;CL:0000117!3.11e-09!23;CL:0000337!3.11e-09!23;CL:0000055!1.39e-07!50;CL:0000107!2.88e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.29e-23,33;CL:0000047,1.29e-23,33;CL:0000031,1.29e-23,33;CL:0000404,1.29e-23,33;CL:0000393,4.72e-19,39;CL:0000211,4.72e-19,39;CL:0002319,1.01e-16,43;CL:0000221,3.29e-16,44;CL:0000133,3.29e-16,44;CL:0000117,6.70e-14,23;CL:0000337,6.70e-14,23;CL:0000107,6.46e-10,9;CL:0002321,4.44e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.68e-28!75;UBERON:0001016!9.68e-28!75;UBERON:0004121!9.94e-28!102;UBERON:0000924!9.94e-28!102;UBERON:0006601!9.94e-28!102;UBERON:0001017!2.89e-27!73;UBERON:0005743!2.89e-27!73;UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0000033!2.71e-20!63;UBERON:0001049!5.77e-18!52;UBERON:0005068!5.77e-18!52;UBERON:0006241!5.77e-18!52;UBERON:0007135!5.77e-18!52;UBERON:0000955!6.51e-17!50;UBERON:0006238!6.51e-17!50;UBERON:0003056!1.21e-16!49;UBERON:0002616!4.35e-16!49;UBERON:0002020!6.41e-13!34;UBERON:0003080!3.73e-12!40;UBERON:0002780!2.08e-11!39;UBERON:0001890!2.08e-11!39;UBERON:0006240!2.08e-11!39;UBERON:0007811!9.06e-11!86;UBERON:0002791!8.47e-10!29;UBERON:0003528!8.47e-10!29;UBERON:0001893!8.47e-10!29;UBERON:0000153!8.61e-10!94;UBERON:0002021!3.15e-08!10;UBERON:0000411!3.15e-08!10;UBERON:0001950!3.15e-08!10;UBERON:0000010!2.37e-07!11;UBERON:0002410!2.88e-07!9;UBERON:0003076!7.54e-07!12;UBERON:0003057!7.54e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.30e-38,73;UBERON:0001016,1.56e-36,75;UBERON:0004121,2.75e-33,95;UBERON:0000924,2.75e-33,95;UBERON:0006601,2.75e-33,95;UBERON:0002346,1.21e-26,64;UBERON:0003075,1.21e-26,64;UBERON:0007284,1.21e-26,64;UBERON:0010371,9.62e-24,73;UBERON:0000073,3.10e-23,54;UBERON:0001049,1.27e-20,52;UBERON:0005068,1.27e-20,52;UBERON:0006241,1.27e-20,52;UBERON:0007135,1.27e-20,52;UBERON:0010314,3.64e-18,92;UBERON:0000955,5.13e-15,47;UBERON:0006238,5.13e-15,47;UBERON:0002020,5.85e-15,34;UBERON:0003076,1.65e-14,12;UBERON:0003057,1.65e-14,12;UBERON:0002616,1.01e-13,46;UBERON:0003056,9.84e-12,49;UBERON:0002021,2.16e-11,10;UBERON:0000411,2.16e-11,10;UBERON:0001950,2.16e-11,10;UBERON:0002240,2.03e-10,6;UBERON:0005174,2.03e-10,6;UBERON:0001137,2.03e-10,6;UBERON:0002410,6.46e-10,9;UBERON:0003080,8.25e-10,40;UBERON:0003528,1.72e-09,29;UBERON:0002791,1.72e-09,29;UBERON:0001893,1.72e-09,29;UBERON:0002780,1.02e-08,39;UBERON:0001890,1.02e-08,39;UBERON:0006240,1.02e-08,39;UBERON:0001948,1.25e-08,5;UBERON:0002315,1.25e-08,5;UBERON:0002950,3.06e-08,4;UBERON:0001891,3.06e-08,4;UBERON:0009616,3.06e-08,4;UBERON:0010286,3.06e-08,4;UBERON:0011216,5.69e-08,194;UBERON:0000010,6.83e-08,11;UBERON:0002619,1.31e-07,17;UBERON:0000956,4.20e-07,21;UBERON:0001869,4.20e-07,21;UBERON:0000203,4.20e-07,21;UBERON:0000013,6.08e-07,3 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0.411343300817216,0.42438965179803,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.42825492201902,2.42955395046775,0.244981598429908,0.0958454710182364,0,2.20231761998777,3.06449611404451,4.6081959976873,0.791317726381163,1.46380229763855,0,3.62937898701795,2.8138130501584,1.83357897332172,2.65165726926301,2.42031857358475,2.05039390407831,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0.376999773989026,0,0,0,0.161766849947409,0,0,0,40.9893115816166,52.1522299965503,0,0,0,0,5.09288173976397,0.915001205637253,0.753926112677186,1.56441888173049,2.55715457330331,5.194701113989,3.40706652442291,0,0,0,0.420883711772948,0.910843100738926,0.229902104433473,0.540186389416048,0.753524089178575,1.63287597963187,2.69038812598185,1.59292931751539,1.55222022443409,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0.308713837137853,0,0,0,0.928946687441754,0.257734922644187,0.403367049246685,0,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,2.81308047821288,0,0,2.52406575533005,3.12350995437311,2.58508077279359,0.238968797952552,0.668396022247182,2.26461224631066,2.83367491172426,3.50707029493574,7.11518000303742,8.9969968598106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0,0,0.532020700926821,0,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0,0,0.457556346413045,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,2.76195141904306,2.86447756719698,2.06223818812425,4.7955776383945,3.0215755895588,0.675022500231806,1.80128481289688,0.453142408984205,4.14208249401456,0.830298780673413,0.399024873401031,0.170733605754134,0,0.628839487883947,0.183843508450014,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.320125762024346,0.287177344778066,0.476293691283074,0.231768651889711,0.578727661391115,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.507687647350059,0,0.526139422875686,0.679020569229309,0,0.474540072496697,0.394017929502254,1.63692417267876,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p4@Ralyl | |||
}} |
Revision as of 01:36, 14 September 2013
Short description: | p4@Ralyl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ralyl_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -1bp_to_uc008oqe.1_5end |
EntrezGene: | Ralyl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.29e-23 | 33 |
neuronal stem cell | 1.29e-23 | 33 |
neuroblast | 1.29e-23 | 33 |
electrically signaling cell | 1.29e-23 | 33 |
electrically responsive cell | 4.72e-19 | 39 |
electrically active cell | 4.72e-19 | 39 |
neural cell | 1.01e-16 | 43 |
ectodermal cell | 3.29e-16 | 44 |
neurectodermal cell | 3.29e-16 | 44 |
CNS neuron (sensu Vertebrata) | 6.70e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.70e-14 | 23 |
autonomic neuron | 6.46e-10 | 9 |
embryonic cell | 4.44e-08 | 70 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.