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FFCP PHASE1:Mm9::chr3:142223502..142223533,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=55932|HGNC=|MCL_coexpression_id=3396|UniProt=|association_with_transcript=-38bp_to_uc008row.1_5end|description=CAGE_peak_1_at_Gbp3_5end|id=chr3:142223502..142223533,+|ontology_enrichment_celltype=CL:0000988!2.45e-08!32;CL:0002032!2.45e-08!32;CL:0000037!2.45e-08!32;CL:0000566!2.45e-08!32;CL:0000837!2.45e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.35e-11,32;CL:0002032,1.35e-11,32;CL:0000037,1.35e-11,32;CL:0000837,1.35e-11,32;CL:0002320,3.74e-08,46;CL:0000134,3.74e-08,46;CL:0002031,1.07e-07,25;CL:0000219,3.61e-07,54;CL:0000049,3.71e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.58e-10!48;UBERON:0002390!7.19e-09!45;UBERON:0003061!7.19e-09!45;UBERON:0002405!8.02e-09!70;UBERON:0003081!1.23e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.57e-16,48;UBERON:0002405,5.57e-16,48;UBERON:0002390,4.70e-14,45;UBERON:0003061,4.70e-14,45;UBERON:0003081,3.41e-11,87;UBERON:0000077,5.85e-10,35;UBERON:0000926,1.52e-09,120;UBERON:0004120,1.52e-09,120;UBERON:0006603,1.52e-09,120;UBERON:0004177,4.13e-09,29;UBERON:0005057,4.13e-09,29;UBERON:0002384,3.74e-08,46;UBERON:0003408,1.66e-07,24;UBERON:0002370,4.93e-07,23;UBERON:0000974,4.93e-07,23;UBERON:0004807,4.93e-07,23;UBERON:0005058,4.93e-07,23;UBERON:0003351,4.93e-07,23;UBERON:0009113,4.93e-07,23;UBERON:0003295,4.93e-07,23;UBERON:0009722,4.93e-07,23;UBERON:0005562,4.93e-07,23;UBERON:0007690,4.93e-07,23|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,0,0.233612640595526,45.0640398811101,1.68946466582,10.0647746318457,0,0.398860794976682,2.73921167889929,6.46910977900581,4.33042690360362,9.31386229993199,0.699561878128147,35.0163003547644,35.2384094366749,24.6145998042858,1.7008658030214,4.17021995043718,7.05239430675126,2.23989391910769,4.12936705920906,1.14846392823004,0.86152399231815,1.50829862880122,0.950117097281869,1.51218077855958,1.99557459589774,0,0.61506478758457,0,0,0,0,1.25559489221072,5.4693474116666,2.09409497589519,0.588231488031014,0.683045484958446,0.971020706062307,1.51076181570693,0.709638518536602,0.734187008646726,0.782391344348039,0.218025156380447,0,0.194429899074283,0.699932108126813,0,20.1339127269284,3.62681071005672,5.04140698713696,1.28629718017973,1.43266719969378,3.09403255366465,0,0,0,1.35537812827653,0.889294796111139,0,1.97773272513395,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,2.20231761998777,0.510749352340751,0.614426133024974,0,0,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,5.98236927332154,10.5044468548432,3.47837386442013,1.72084775396277,0,0,0.649776417447669,0,1.40444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,2.16949371466214,20.9739685754209,2.3750742250372,0,0.304465478312141,0.230615497256059,0.753613202763113,1.29347577849275,1.38233250462643,0.741584903203122,6.94076913215576,0,0.485300549842228,1.32504911076236,1.45462575940567,1.86391761218122,0.292780797011547,0,1.53274233125155,34.2671256086932,19.7967901227825,32.6570483577776,0.898743836428936,1.37250180845588,0.502617408451458,0.347648640384553,1.02286182932132,1.24672826735736,0.162241263067758,0.81471491080253,2.11491850037158,1.51633655060205,0.841767423545896,0,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0.61734640922383,0,28.0885274925294,22.9039637332097,21.596425954065,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,1.31333971263276,1.13496333364198,1.31579988682799,3.29325172936576,1.61047702512446,0.210289948564127,0.205809224758569,0.330418782983798,2.3800550999719,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,1.42358718463353,0.823494773620054,0.251335208800269,0.994782360205754,0.38992817423824,0.898819408654221,0.864552199498777,1.39398891278057,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.442830443938806,0.156998727841375,0.370191491765402,0.889357881261447,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.810676133875177,0.549122826376163,4.31304619582064,2.23284568601102,1.87222603868736,0.505157755894224,1.97337154874103,0,6.09685527549795,0,0,0.169745085775188,0,0.502518772325447,0.476087281772027,0.780534591431195,1.10344600874334,2.21464689648775,1.2756381492599,2.94953966488328,3.10832967358612,2.89298117163023,18.0949540727127,46.775888808409,1.96705709207614,2.75936746304733,1.12385412991454,0.586058432961016,0.163934945376675,1.76729649043061,0,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0,1.18586333383957,0.642642632843614,1.98716119291576,0.178065603667255,0.162886959353576,3.46437258242324,0,0,0.604647113929502,0,0,0.307435147943927,1.03371317267288,0,0.712994756769443,0.632073515871632,2.10837217149998,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,3.52007562095566,1.27099242518292,0.220528398054962,1.81374878235628,1.13025098687134,0.180938774784468,0.477489376012546,0.492422699235184,2.33184669303881,0.556275906031529,7.86006051670122,0,1.11116716421827,3.39063222608444,5.74115756428306,8.46479240864134,48.2738741182549,43.2449987680103,38.143192770021,0.954670618015114,0,0.609958401380546,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.743881101528023,2.09404753587224,0.129614973291793,2.4853572523477,0,0,0.165458490457098,0,0.258319646955462,0.506868376472335,0.234714477291508,0.651021924219751,0.419437377702843,0,0.288030006257865,1.89606672376907,1.62180172232131,2.05421914329655,4.41730798124503,2.32734704367726,1.98681354781265,3.12508168751919,3.10148007066612,2.62512769865184,2.74344503957999,2.82313318383153,2.53390489923356,3.46362629905186,1.63627663054197,0.453460767230423,1.10992976687032,0.0897138566094757,0,4.63655025677257,7.88266396894964,6.59345847362154,0.428736758158132,1.50471631210609,0,0.460325236507177,0.572895513439397,1.3748254587495,0,0,1.35004500046361,0.45032120322422,0,0,0,0,0,0.243106717068294,0.628839487883947,0.183843508450014,0,0,0,0,0.25347929989024,0.754505365544305,0.0936415074698824,0.512201219238954,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0,1.12228454331548,0,0.394017929502254,1.22769312950907,0.154936841185966,0.192906610981141,0,0.701794825336225,0.644613162144895,0,0.882365676478062,1.39120701372253|short_description=p1@Gbp3}}
|EntrezGene=55932
|HGNC=
|MCL_coexpression_id=3396
|UniProt=
|association_with_transcript=-38bp_to_uc008row.1_5end
|description=CAGE_peak_1_at_Gbp3_5end
|id=chr3:142223502..142223533,+
|ontology_enrichment_celltype=CL:0000988!2.45e-08!32;CL:0002032!2.45e-08!32;CL:0000037!2.45e-08!32;CL:0000566!2.45e-08!32;CL:0000837!2.45e-08!32
|ontology_enrichment_celltype_v019_2=CL:0000988,1.35e-11,32;CL:0002032,1.35e-11,32;CL:0000037,1.35e-11,32;CL:0000837,1.35e-11,32;CL:0002320,3.74e-08,46;CL:0000134,3.74e-08,46;CL:0002031,1.07e-07,25;CL:0000219,3.61e-07,54;CL:0000049,3.71e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!3.58e-10!48;UBERON:0002390!7.19e-09!45;UBERON:0003061!7.19e-09!45;UBERON:0002405!8.02e-09!70;UBERON:0003081!1.23e-08!88
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.57e-16,48;UBERON:0002405,5.57e-16,48;UBERON:0002390,4.70e-14,45;UBERON:0003061,4.70e-14,45;UBERON:0003081,3.41e-11,87;UBERON:0000077,5.85e-10,35;UBERON:0000926,1.52e-09,120;UBERON:0004120,1.52e-09,120;UBERON:0006603,1.52e-09,120;UBERON:0004177,4.13e-09,29;UBERON:0005057,4.13e-09,29;UBERON:0002384,3.74e-08,46;UBERON:0003408,1.66e-07,24;UBERON:0002370,4.93e-07,23;UBERON:0000974,4.93e-07,23;UBERON:0004807,4.93e-07,23;UBERON:0005058,4.93e-07,23;UBERON:0003351,4.93e-07,23;UBERON:0009113,4.93e-07,23;UBERON:0003295,4.93e-07,23;UBERON:0009722,4.93e-07,23;UBERON:0005562,4.93e-07,23;UBERON:0007690,4.93e-07,23
|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,0,0.233612640595526,45.0640398811101,1.68946466582,10.0647746318457,0,0.398860794976682,2.73921167889929,6.46910977900581,4.33042690360362,9.31386229993199,0.699561878128147,35.0163003547644,35.2384094366749,24.6145998042858,1.7008658030214,4.17021995043718,7.05239430675126,2.23989391910769,4.12936705920906,1.14846392823004,0.86152399231815,1.50829862880122,0.950117097281869,1.51218077855958,1.99557459589774,0,0.61506478758457,0,0,0,0,1.25559489221072,5.4693474116666,2.09409497589519,0.588231488031014,0.683045484958446,0.971020706062307,1.51076181570693,0.709638518536602,0.734187008646726,0.782391344348039,0.218025156380447,0,0.194429899074283,0.699932108126813,0,20.1339127269284,3.62681071005672,5.04140698713696,1.28629718017973,1.43266719969378,3.09403255366465,0,0,0,1.35537812827653,0.889294796111139,0,1.97773272513395,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,2.20231761998777,0.510749352340751,0.614426133024974,0,0,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,5.98236927332154,10.5044468548432,3.47837386442013,1.72084775396277,0,0,0.649776417447669,0,1.40444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,2.16949371466214,20.9739685754209,2.3750742250372,0,0.304465478312141,0.230615497256059,0.753613202763113,1.29347577849275,1.38233250462643,0.741584903203122,6.94076913215576,0,0.485300549842228,1.32504911076236,1.45462575940567,1.86391761218122,0.292780797011547,0,1.53274233125155,34.2671256086932,19.7967901227825,32.6570483577776,0.898743836428936,1.37250180845588,0.502617408451458,0.347648640384553,1.02286182932132,1.24672826735736,0.162241263067758,0.81471491080253,2.11491850037158,1.51633655060205,0.841767423545896,0,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0.61734640922383,0,28.0885274925294,22.9039637332097,21.596425954065,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,1.31333971263276,1.13496333364198,1.31579988682799,3.29325172936576,1.61047702512446,0.210289948564127,0.205809224758569,0.330418782983798,2.3800550999719,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,1.42358718463353,0.823494773620054,0.251335208800269,0.994782360205754,0.38992817423824,0.898819408654221,0.864552199498777,1.39398891278057,0,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.442830443938806,0.156998727841375,0.370191491765402,0.889357881261447,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.810676133875177,0.549122826376163,4.31304619582064,2.23284568601102,1.87222603868736,0.505157755894224,1.97337154874103,0,6.09685527549795,0,0,0.169745085775188,0,0.502518772325447,0.476087281772027,0.780534591431195,1.10344600874334,2.21464689648775,1.2756381492599,2.94953966488328,3.10832967358612,2.89298117163023,18.0949540727127,46.775888808409,1.96705709207614,2.75936746304733,1.12385412991454,0.586058432961016,0.163934945376675,1.76729649043061,0,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0,1.18586333383957,0.642642632843614,1.98716119291576,0.178065603667255,0.162886959353576,3.46437258242324,0,0,0.604647113929502,0,0,0.307435147943927,1.03371317267288,0,0.712994756769443,0.632073515871632,2.10837217149998,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,3.52007562095566,1.27099242518292,0.220528398054962,1.81374878235628,1.13025098687134,0.180938774784468,0.477489376012546,0.492422699235184,2.33184669303881,0.556275906031529,7.86006051670122,0,1.11116716421827,3.39063222608444,5.74115756428306,8.46479240864134,48.2738741182549,43.2449987680103,38.143192770021,0.954670618015114,0,0.609958401380546,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.743881101528023,2.09404753587224,0.129614973291793,2.4853572523477,0,0,0.165458490457098,0,0.258319646955462,0.506868376472335,0.234714477291508,0.651021924219751,0.419437377702843,0,0.288030006257865,1.89606672376907,1.62180172232131,2.05421914329655,4.41730798124503,2.32734704367726,1.98681354781265,3.12508168751919,3.10148007066612,2.62512769865184,2.74344503957999,2.82313318383153,2.53390489923356,3.46362629905186,1.63627663054197,0.453460767230423,1.10992976687032,0.0897138566094757,0,4.63655025677257,7.88266396894964,6.59345847362154,0.428736758158132,1.50471631210609,0,0.460325236507177,0.572895513439397,1.3748254587495,0,0,1.35004500046361,0.45032120322422,0,0,0,0,0,0.243106717068294,0.628839487883947,0.183843508450014,0,0,0,0,0.25347929989024,0.754505365544305,0.0936415074698824,0.512201219238954,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0,1.12228454331548,0,0.394017929502254,1.22769312950907,0.154936841185966,0.192906610981141,0,0.701794825336225,0.644613162144895,0,0.882365676478062,1.39120701372253
|short_description=p1@Gbp3
}}

Revision as of 01:43, 14 September 2013

Short description:p1@Gbp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gbp3_5end
Coexpression cluster:MCL_coexpression_mm9:3396
Association with transcript: -38bp_to_uc008row.1_5end
EntrezGene:Gbp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gbp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E945.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.47
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A235.02
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A435.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D95.98
Mouse Schwann, donor2.CNhs12573.11746-123F910.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H920.97
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H16.94
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C734.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D432.66
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C828.09
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.60
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A146.78
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G27.86
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C648.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C943.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D338.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C54.42
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.39





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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