FFCP PHASE1:Mm9::chr3:7366598..7366641,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18767|HGNC=|MCL_coexpression_id=13|UniProt=P63248,Q3UTL0|association_with_transcript=0bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end|description=CAGE_peak_1_at_Pkia_5end|id=chr3:7366598..7366641,+|ontology_enrichment_celltype=CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0000540!1.53e-12!33;CL:0000047!1.53e-12!33;CL:0000031!1.53e-12!33;CL:0000404!1.53e-12!33;CL:0000393!2.26e-12!39;CL:0000211!2.26e-12!39;CL:0000221!2.32e-09!44;CL:0000133!2.32e-09!44;CL:0002319!2.88e-09!43;CL:0000055!4.12e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-14,23;CL:0000337,9.57e-14,23;CL:0000540,1.39e-12,33;CL:0000047,1.39e-12,33;CL:0000031,1.39e-12,33;CL:0000404,1.39e-12,33;CL:0000393,2.06e-12,39;CL:0000211,2.06e-12,39;CL:0000221,2.17e-09,44;CL:0000133,2.17e-09,44;CL:0002319,2.69e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.15e-22!73;UBERON:0005743!1.15e-22!73;UBERON:0000073!4.49e-22!75;UBERON:0001016!4.49e-22!75;UBERON:0001049!4.27e-21!52;UBERON:0005068!4.27e-21!52;UBERON:0006241!4.27e-21!52;UBERON:0007135!4.27e-21!52;UBERON:0000033!5.73e-20!63;UBERON:0002020!1.33e-19!34;UBERON:0004121!2.30e-19!102;UBERON:0000924!2.30e-19!102;UBERON:0006601!2.30e-19!102;UBERON:0002346!2.34e-19!71;UBERON:0003075!2.34e-19!71;UBERON:0007284!2.34e-19!71;UBERON:0000955!2.37e-19!50;UBERON:0006238!2.37e-19!50;UBERON:0002616!8.43e-19!49;UBERON:0003056!7.90e-17!49;UBERON:0002791!2.71e-16!29;UBERON:0003528!2.71e-16!29;UBERON:0001893!2.71e-16!29;UBERON:0003080!4.50e-16!40;UBERON:0002780!1.94e-15!39;UBERON:0001890!1.94e-15!39;UBERON:0006240!1.94e-15!39;UBERON:0000025!3.31e-13!114;UBERON:0004111!1.55e-12!122;UBERON:0000956!1.96e-11!21;UBERON:0001869!1.96e-11!21;UBERON:0000203!1.96e-11!21;UBERON:0002619!1.31e-09!17;UBERON:0000468!7.21e-09!333;UBERON:0000153!1.55e-07!94;UBERON:0007811!2.04e-07!86;UBERON:0002021!2.45e-07!10;UBERON:0000411!2.45e-07!10;UBERON:0001950!2.45e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.39e-25,92;UBERON:0001017,9.54e-23,73;UBERON:0000073,3.20e-22,54;UBERON:0001016,3.76e-22,75;UBERON:0002346,5.65e-22,64;UBERON:0003075,5.65e-22,64;UBERON:0007284,5.65e-22,64;UBERON:0001049,3.60e-21,52;UBERON:0005068,3.60e-21,52;UBERON:0006241,3.60e-21,52;UBERON:0007135,3.60e-21,52;UBERON:0004121,3.62e-21,95;UBERON:0000924,3.62e-21,95;UBERON:0006601,3.62e-21,95;UBERON:0010371,6.73e-20,73;UBERON:0002020,1.14e-19,34;UBERON:0000955,6.79e-18,47;UBERON:0006238,6.79e-18,47;UBERON:0002616,2.37e-17,46;UBERON:0003056,6.93e-17,49;UBERON:0003528,2.39e-16,29;UBERON:0002791,2.39e-16,29;UBERON:0001893,2.39e-16,29;UBERON:0003080,3.97e-16,40;UBERON:0002780,1.72e-15,39;UBERON:0001890,1.72e-15,39;UBERON:0006240,1.72e-15,39;UBERON:0000025,4.29e-13,114;UBERON:0004111,1.99e-12,122;UBERON:0000956,1.80e-11,21;UBERON:0001869,1.80e-11,21;UBERON:0000203,1.80e-11,21;UBERON:0002619,1.23e-09,17;UBERON:0002021,2.33e-07,10;UBERON:0000411,2.33e-07,10;UBERON:0001950,2.33e-07,10|phase1_expression=15.6945870162698,0,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0.171200729931206,0,0.999329285446988,1.41732687172878,0.699561878128147,0,0,0,27.7241125892487,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0.950117097281869,0,0.443461021310609,0,0,0,1.1554064790051,1.16364251750945,0.408338712524738,0,0,0,0,0,0,11.7084040717287,15.0037858204882,7.52541683862894,2.34717403304412,16.5699118849139,14.4992880604751,23.9148775861369,8.39918529752175,2.87505128729943,0,0,0,20.0662360108039,51.2894857490375,50.5358650431893,122.806091741776,113.204069564215,124.864786490717,5.76035704517525,5.33576877666684,0,0.988866362566974,0,7.19040265244171,4.2264013585371,65.3244557543409,58.052553482627,67.724637555145,97.1213346972932,101.157791755839,105.097105726431,68.8170481910937,84.5681283681219,67.1706874096271,79.0384622747312,83.8691671579089,131.754401442464,139.518656493675,142.730263532552,73.4251287373632,97.3579315354806,92.9013346483005,238.649154233671,236.336990126511,187.331443054427,5.98236927332154,14.81202578093,17.102004833399,5.16254326188832,0,0,0.649776417447669,0.896053774194671,24.5777735230566,10.2258193546835,7.27400812888033,9.18682893726885,21.8307300653855,1.28326477414318,7.64415719119937,0,6.92771331235885,6.84071636782766,7.58286667522175,11.7609396110632,5.43769555659061,5.64080128446334,10.5826049327343,9.13396434936424,9.91646638201052,7.68685466818375,10.347806227942,7.03732911446183,1.73036477414062,18.6533170426686,8.84610551949874,42.2211478362738,21.2007857721978,12.1218813283806,11.1835056730873,95.1537590287528,122.316876779058,2.55457055208591,0.239630249011841,0.599902730993408,0.254140454146129,129.419112445767,140.910185668137,325.444771972319,119.417307972094,118.396256743943,87.4787667595748,115.678020567311,24.3396079602256,12.3162900903992,15.6688110228878,13.8891624885073,9.88915366516548,21.8406999211799,35.2921774418485,32.250831016843,34.6986145671772,45.4803707011217,43.3838984711544,38.2880988693743,7.11374376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| ||
|EntrezGene=18767 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=P63248,Q3UTL0 | |||
|association_with_transcript=0bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end | |||
|description=CAGE_peak_1_at_Pkia_5end | |||
|id=chr3:7366598..7366641,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0000540!1.53e-12!33;CL:0000047!1.53e-12!33;CL:0000031!1.53e-12!33;CL:0000404!1.53e-12!33;CL:0000393!2.26e-12!39;CL:0000211!2.26e-12!39;CL:0000221!2.32e-09!44;CL:0000133!2.32e-09!44;CL:0002319!2.88e-09!43;CL:0000055!4.12e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-14,23;CL:0000337,9.57e-14,23;CL:0000540,1.39e-12,33;CL:0000047,1.39e-12,33;CL:0000031,1.39e-12,33;CL:0000404,1.39e-12,33;CL:0000393,2.06e-12,39;CL:0000211,2.06e-12,39;CL:0000221,2.17e-09,44;CL:0000133,2.17e-09,44;CL:0002319,2.69e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.15e-22!73;UBERON:0005743!1.15e-22!73;UBERON:0000073!4.49e-22!75;UBERON:0001016!4.49e-22!75;UBERON:0001049!4.27e-21!52;UBERON:0005068!4.27e-21!52;UBERON:0006241!4.27e-21!52;UBERON:0007135!4.27e-21!52;UBERON:0000033!5.73e-20!63;UBERON:0002020!1.33e-19!34;UBERON:0004121!2.30e-19!102;UBERON:0000924!2.30e-19!102;UBERON:0006601!2.30e-19!102;UBERON:0002346!2.34e-19!71;UBERON:0003075!2.34e-19!71;UBERON:0007284!2.34e-19!71;UBERON:0000955!2.37e-19!50;UBERON:0006238!2.37e-19!50;UBERON:0002616!8.43e-19!49;UBERON:0003056!7.90e-17!49;UBERON:0002791!2.71e-16!29;UBERON:0003528!2.71e-16!29;UBERON:0001893!2.71e-16!29;UBERON:0003080!4.50e-16!40;UBERON:0002780!1.94e-15!39;UBERON:0001890!1.94e-15!39;UBERON:0006240!1.94e-15!39;UBERON:0000025!3.31e-13!114;UBERON:0004111!1.55e-12!122;UBERON:0000956!1.96e-11!21;UBERON:0001869!1.96e-11!21;UBERON:0000203!1.96e-11!21;UBERON:0002619!1.31e-09!17;UBERON:0000468!7.21e-09!333;UBERON:0000153!1.55e-07!94;UBERON:0007811!2.04e-07!86;UBERON:0002021!2.45e-07!10;UBERON:0000411!2.45e-07!10;UBERON:0001950!2.45e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.39e-25,92;UBERON:0001017,9.54e-23,73;UBERON:0000073,3.20e-22,54;UBERON:0001016,3.76e-22,75;UBERON:0002346,5.65e-22,64;UBERON:0003075,5.65e-22,64;UBERON:0007284,5.65e-22,64;UBERON:0001049,3.60e-21,52;UBERON:0005068,3.60e-21,52;UBERON:0006241,3.60e-21,52;UBERON:0007135,3.60e-21,52;UBERON:0004121,3.62e-21,95;UBERON:0000924,3.62e-21,95;UBERON:0006601,3.62e-21,95;UBERON:0010371,6.73e-20,73;UBERON:0002020,1.14e-19,34;UBERON:0000955,6.79e-18,47;UBERON:0006238,6.79e-18,47;UBERON:0002616,2.37e-17,46;UBERON:0003056,6.93e-17,49;UBERON:0003528,2.39e-16,29;UBERON:0002791,2.39e-16,29;UBERON:0001893,2.39e-16,29;UBERON:0003080,3.97e-16,40;UBERON:0002780,1.72e-15,39;UBERON:0001890,1.72e-15,39;UBERON:0006240,1.72e-15,39;UBERON:0000025,4.29e-13,114;UBERON:0004111,1.99e-12,122;UBERON:0000956,1.80e-11,21;UBERON:0001869,1.80e-11,21;UBERON:0000203,1.80e-11,21;UBERON:0002619,1.23e-09,17;UBERON:0002021,2.33e-07,10;UBERON:0000411,2.33e-07,10;UBERON:0001950,2.33e-07,10 | |||
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| |||
|short_description=p1@Pkia | |||
}} |
Revision as of 02:31, 14 September 2013
Short description: | p1@Pkia |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pkia_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000028999, NM_008862, uc008oof.1_5end |
EntrezGene: | Pkia |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.57e-14 | 23 |
neuroblast (sensu Vertebrata) | 9.57e-14 | 23 |
neuron | 1.39e-12 | 33 |
neuronal stem cell | 1.39e-12 | 33 |
neuroblast | 1.39e-12 | 33 |
electrically signaling cell | 1.39e-12 | 33 |
electrically responsive cell | 2.06e-12 | 39 |
electrically active cell | 2.06e-12 | 39 |
ectodermal cell | 2.17e-09 | 44 |
neurectodermal cell | 2.17e-09 | 44 |
neural cell | 2.69e-09 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.