FFCP PHASE1:Mm9::chr3:88552800..88552811,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:88552800..88552811,-|id=chr3:88552800..88552811,-|ontology_enrichment_celltype=CL:0000540!1.54e-16!33;CL:0000047!1.54e-16!33;CL:0000031!1.54e-16!33;CL:0000404!1.54e-16!33;CL:0002319!1.73e-15!43;CL:0000221!6.92e-15!44;CL:0000133!6.92e-15!44;CL:0000117!4.29e-14!23;CL:0000337!4.29e-14!23;CL:0000393!9.38e-14!39;CL:0000211!9.38e-14!39;CL:0000055!6.94e-13!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-22,23;CL:0000337,1.93e-22,23;CL:0000540,4.03e-15,33;CL:0000047,4.03e-15,33;CL:0000031,4.03e-15,33;CL:0000404,4.03e-15,33;CL:0002614,4.07e-15,3;CL:0002610,2.97e-14,3;CL:0000393,1.59e-12,39;CL:0000211,1.59e-12,39;CL:0002319,3.39e-11,43;CL:0000221,6.67e-11,44;CL:0000133,6.67e-11,44;CL:0002611,2.02e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.14e-29!73;UBERON:0005743!1.14e-29!73;UBERON:0000073!2.31e-29!75;UBERON:0001016!2.31e-29!75;UBERON:0002346!1.13e-24!71;UBERON:0003075!1.13e-24!71;UBERON:0007284!1.13e-24!71;UBERON:0004121!2.82e-24!102;UBERON:0000924!2.82e-24!102;UBERON:0006601!2.82e-24!102;UBERON:0001049!9.17e-23!52;UBERON:0005068!9.17e-23!52;UBERON:0006241!9.17e-23!52;UBERON:0007135!9.17e-23!52;UBERON:0000955!4.14e-21!50;UBERON:0006238!4.14e-21!50;UBERON:0002616!3.22e-20!49;UBERON:0000033!1.44e-19!63;UBERON:0002020!3.11e-17!34;UBERON:0003056!1.40e-15!49;UBERON:0003080!9.92e-15!40;UBERON:0002780!5.80e-14!39;UBERON:0001890!5.80e-14!39;UBERON:0006240!5.80e-14!39;UBERON:0002791!7.64e-13!29;UBERON:0003528!7.64e-13!29;UBERON:0001893!7.64e-13!29;UBERON:0007811!1.13e-11!86;UBERON:0000153!3.99e-10!94;UBERON:0003076!4.52e-09!12;UBERON:0003057!4.52e-09!12;UBERON:0000956!1.40e-07!21;UBERON:0001869!1.40e-07!21;UBERON:0000203!1.40e-07!21;UBERON:0002298!3.20e-07!6;UBERON:0002240!4.37e-07!6;UBERON:0005174!4.37e-07!6;UBERON:0001137!4.37e-07!6;UBERON:0002420!4.64e-07!8;UBERON:0007245!4.64e-07!8;UBERON:0010009!4.64e-07!8;UBERON:0010011!4.64e-07!8;UBERON:0000454!4.64e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-21,54;UBERON:0002420,4.71e-20,8;UBERON:0007245,4.71e-20,8;UBERON:0010009,4.71e-20,8;UBERON:0010011,4.71e-20,8;UBERON:0000454,4.71e-20,8;UBERON:0001017,1.43e-19,73;UBERON:0001016,5.63e-19,75;UBERON:0002020,3.16e-17,34;UBERON:0001049,4.07e-17,52;UBERON:0005068,4.07e-17,52;UBERON:0006241,4.07e-17,52;UBERON:0007135,4.07e-17,52;UBERON:0002038,4.07e-15,3;UBERON:0009663,4.07e-15,3;UBERON:0009661,4.07e-15,3;UBERON:0000125,4.07e-15,3;UBERON:0002308,4.07e-15,3;UBERON:0004121,2.14e-14,95;UBERON:0000924,2.14e-14,95;UBERON:0006601,2.14e-14,95;UBERON:0004684,2.97e-14,3;UBERON:0002275,2.97e-14,3;UBERON:0002346,1.88e-13,64;UBERON:0003075,1.88e-13,64;UBERON:0007284,1.88e-13,64;UBERON:0002240,2.45e-12,6;UBERON:0005174,2.45e-12,6;UBERON:0001137,2.45e-12,6;UBERON:0010371,1.73e-11,73;UBERON:0002950,1.83e-11,4;UBERON:0001891,1.83e-11,4;UBERON:0009616,1.83e-11,4;UBERON:0010286,1.83e-11,4;UBERON:0003528,2.93e-11,29;UBERON:0002791,2.93e-11,29;UBERON:0001893,2.93e-11,29;UBERON:0002256,2.02e-10,2;UBERON:0002616,4.13e-10,46;UBERON:0002780,4.50e-10,39;UBERON:0001890,4.50e-10,39;UBERON:0006240,4.50e-10,39;UBERON:0000955,7.39e-10,47;UBERON:0006238,7.39e-10,47;UBERON:0003080,8.77e-10,40;UBERON:0003076,3.01e-09,12;UBERON:0003057,3.01e-09,12;UBERON:0001948,6.52e-09,5;UBERON:0002315,6.52e-09,5;UBERON:0010314,1.34e-08,92;UBERON:0000369,2.92e-08,5;UBERON:0002435,2.92e-08,5;UBERON:0000204,2.92e-08,5;UBERON:0010082,2.92e-08,5;UBERON:0003056,1.05e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.675029691658453,0.210324961351382,2.28520787523043,2.20868540951614,0,0.575072826109418,0.919218786610021,2.20231761998777,1.65993539510744,1.99688493233117,0.527545150920775,1.09785172322892,0,2.23346399201105,3.37657566019008,3.97275444219706,0.589257170947335,1.70846016958924,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,1.83000241127451,1.00523481690292,0.695297280769106,1.02286182932132,2.49345653471472,0.811206315338788,0,0,0,0,0.260240885925407,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.477937595905104,0,0.283076530788832,0,0.876767573733936,0.790575555893047,0.963963949265421,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0.68741272937475,0,0.755393897389701,0.675022500231806,1.35096360967266,1.81256963593682,0.51776031175182,0.103787347584177,0.798049746802062,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr3:88552800..88552811,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:88552800..88552811,- | |||
|id=chr3:88552800..88552811,- | |||
|ontology_enrichment_celltype=CL:0000540!1.54e-16!33;CL:0000047!1.54e-16!33;CL:0000031!1.54e-16!33;CL:0000404!1.54e-16!33;CL:0002319!1.73e-15!43;CL:0000221!6.92e-15!44;CL:0000133!6.92e-15!44;CL:0000117!4.29e-14!23;CL:0000337!4.29e-14!23;CL:0000393!9.38e-14!39;CL:0000211!9.38e-14!39;CL:0000055!6.94e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-22,23;CL:0000337,1.93e-22,23;CL:0000540,4.03e-15,33;CL:0000047,4.03e-15,33;CL:0000031,4.03e-15,33;CL:0000404,4.03e-15,33;CL:0002614,4.07e-15,3;CL:0002610,2.97e-14,3;CL:0000393,1.59e-12,39;CL:0000211,1.59e-12,39;CL:0002319,3.39e-11,43;CL:0000221,6.67e-11,44;CL:0000133,6.67e-11,44;CL:0002611,2.02e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.14e-29!73;UBERON:0005743!1.14e-29!73;UBERON:0000073!2.31e-29!75;UBERON:0001016!2.31e-29!75;UBERON:0002346!1.13e-24!71;UBERON:0003075!1.13e-24!71;UBERON:0007284!1.13e-24!71;UBERON:0004121!2.82e-24!102;UBERON:0000924!2.82e-24!102;UBERON:0006601!2.82e-24!102;UBERON:0001049!9.17e-23!52;UBERON:0005068!9.17e-23!52;UBERON:0006241!9.17e-23!52;UBERON:0007135!9.17e-23!52;UBERON:0000955!4.14e-21!50;UBERON:0006238!4.14e-21!50;UBERON:0002616!3.22e-20!49;UBERON:0000033!1.44e-19!63;UBERON:0002020!3.11e-17!34;UBERON:0003056!1.40e-15!49;UBERON:0003080!9.92e-15!40;UBERON:0002780!5.80e-14!39;UBERON:0001890!5.80e-14!39;UBERON:0006240!5.80e-14!39;UBERON:0002791!7.64e-13!29;UBERON:0003528!7.64e-13!29;UBERON:0001893!7.64e-13!29;UBERON:0007811!1.13e-11!86;UBERON:0000153!3.99e-10!94;UBERON:0003076!4.52e-09!12;UBERON:0003057!4.52e-09!12;UBERON:0000956!1.40e-07!21;UBERON:0001869!1.40e-07!21;UBERON:0000203!1.40e-07!21;UBERON:0002298!3.20e-07!6;UBERON:0002240!4.37e-07!6;UBERON:0005174!4.37e-07!6;UBERON:0001137!4.37e-07!6;UBERON:0002420!4.64e-07!8;UBERON:0007245!4.64e-07!8;UBERON:0010009!4.64e-07!8;UBERON:0010011!4.64e-07!8;UBERON:0000454!4.64e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-21,54;UBERON:0002420,4.71e-20,8;UBERON:0007245,4.71e-20,8;UBERON:0010009,4.71e-20,8;UBERON:0010011,4.71e-20,8;UBERON:0000454,4.71e-20,8;UBERON:0001017,1.43e-19,73;UBERON:0001016,5.63e-19,75;UBERON:0002020,3.16e-17,34;UBERON:0001049,4.07e-17,52;UBERON:0005068,4.07e-17,52;UBERON:0006241,4.07e-17,52;UBERON:0007135,4.07e-17,52;UBERON:0002038,4.07e-15,3;UBERON:0009663,4.07e-15,3;UBERON:0009661,4.07e-15,3;UBERON:0000125,4.07e-15,3;UBERON:0002308,4.07e-15,3;UBERON:0004121,2.14e-14,95;UBERON:0000924,2.14e-14,95;UBERON:0006601,2.14e-14,95;UBERON:0004684,2.97e-14,3;UBERON:0002275,2.97e-14,3;UBERON:0002346,1.88e-13,64;UBERON:0003075,1.88e-13,64;UBERON:0007284,1.88e-13,64;UBERON:0002240,2.45e-12,6;UBERON:0005174,2.45e-12,6;UBERON:0001137,2.45e-12,6;UBERON:0010371,1.73e-11,73;UBERON:0002950,1.83e-11,4;UBERON:0001891,1.83e-11,4;UBERON:0009616,1.83e-11,4;UBERON:0010286,1.83e-11,4;UBERON:0003528,2.93e-11,29;UBERON:0002791,2.93e-11,29;UBERON:0001893,2.93e-11,29;UBERON:0002256,2.02e-10,2;UBERON:0002616,4.13e-10,46;UBERON:0002780,4.50e-10,39;UBERON:0001890,4.50e-10,39;UBERON:0006240,4.50e-10,39;UBERON:0000955,7.39e-10,47;UBERON:0006238,7.39e-10,47;UBERON:0003080,8.77e-10,40;UBERON:0003076,3.01e-09,12;UBERON:0003057,3.01e-09,12;UBERON:0001948,6.52e-09,5;UBERON:0002315,6.52e-09,5;UBERON:0010314,1.34e-08,92;UBERON:0000369,2.92e-08,5;UBERON:0002435,2.92e-08,5;UBERON:0000204,2.92e-08,5;UBERON:0010082,2.92e-08,5;UBERON:0003056,1.05e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.675029691658453,0.210324961351382,2.28520787523043,2.20868540951614,0,0.575072826109418,0.919218786610021,2.20231761998777,1.65993539510744,1.99688493233117,0.527545150920775,1.09785172322892,0,2.23346399201105,3.37657566019008,3.97275444219706,0.589257170947335,1.70846016958924,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,1.83000241127451,1.00523481690292,0.695297280769106,1.02286182932132,2.49345653471472,0.811206315338788,0,0,0,0,0.260240885925407,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.477937595905104,0,0.283076530788832,0,0.876767573733936,0.790575555893047,0.963963949265421,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0.68741272937475,0,0.755393897389701,0.675022500231806,1.35096360967266,1.81256963593682,0.51776031175182,0.103787347584177,0.798049746802062,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr3:88552800..88552811,- | |||
}} |
Revision as of 02:48, 14 September 2013
Short description: | p@chr3:88552800..88552811, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:88552800..88552811, - |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.93e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-22 | 23 |
neuron | 4.03e-15 | 33 |
neuronal stem cell | 4.03e-15 | 33 |
neuroblast | 4.03e-15 | 33 |
electrically signaling cell | 4.03e-15 | 33 |
neuron of the substantia nigra | 4.07e-15 | 3 |
raphe nuclei neuron | 2.97e-14 | 3 |
electrically responsive cell | 1.59e-12 | 39 |
electrically active cell | 1.59e-12 | 39 |
neural cell | 3.39e-11 | 43 |
ectodermal cell | 6.67e-11 | 44 |
neurectodermal cell | 6.67e-11 | 44 |
neuron of the dorsal spinal cord | 2.02e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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