FFCP PHASE1:Mm9::chr4:107353455..107353476,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56296|HGNC=|MCL_coexpression_id=3445|UniProt=|association_with_transcript=88bp_to_ENSMUST00000131508_5end|description=CAGE_peak_8_at_Dmrtb1_5end|id=chr4:107353455..107353476,-|ontology_enrichment_celltype=CL:0000117!2.04e-15!23;CL:0000337!2.04e-15!23;CL:0002319!3.12e-10!43;CL:0000221!7.37e-10!44;CL:0000133!7.37e-10!44;CL:0000540!3.44e-09!33;CL:0000047!3.44e-09!33;CL:0000031!3.44e-09!33;CL:0000404!3.44e-09!33;CL:0000055!5.90e-08!50;CL:0000393!4.78e-07!39;CL:0000211!4.78e-07!39|ontology_enrichment_celltype_v019_2=CL:0002613,7.38e-28,3;CL:0000120,3.49e-26,3;CL:0000878,1.06e-18,2;CL:0000129,1.06e-18,2;CL:0000117,1.01e-13,23;CL:0000337,1.01e-13,23;CL:0002319,8.76e-13,43;CL:0000221,1.75e-12,44;CL:0000133,1.75e-12,44;CL:0002194,7.66e-10,4;CL:0000766,7.66e-10,4;CL:0000234,7.66e-10,4;CL:0000576,7.66e-10,4;CL:0000235,7.66e-10,4;CL:0000864,7.66e-10,4;CL:0002009,7.66e-10,4;CL:0000040,7.66e-10,4;CL:0000559,7.66e-10,4;CL:0000540,1.57e-09,33;CL:0000047,1.57e-09,33;CL:0000031,1.57e-09,33;CL:0000404,1.57e-09,33;CL:0000393,4.87e-08,39;CL:0000211,4.87e-08,39;CL:0002321,1.12e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.08e-14!73;UBERON:0005743!1.08e-14!73;UBERON:0000073!4.95e-14!75;UBERON:0001016!4.95e-14!75;UBERON:0002020!1.31e-12!34;UBERON:0001049!2.15e-12!52;UBERON:0005068!2.15e-12!52;UBERON:0006241!2.15e-12!52;UBERON:0007135!2.15e-12!52;UBERON:0002616!1.26e-09!49;UBERON:0000955!2.64e-09!50;UBERON:0006238!2.64e-09!50;UBERON:0004121!4.83e-09!102;UBERON:0000924!4.83e-09!102;UBERON:0006601!4.83e-09!102;UBERON:0003080!7.32e-09!40;UBERON:0002346!1.64e-08!71;UBERON:0003075!1.64e-08!71;UBERON:0007284!1.64e-08!71;UBERON:0002780!3.60e-08!39;UBERON:0001890!3.60e-08!39;UBERON:0006240!3.60e-08!39;UBERON:0002791!5.71e-08!29;UBERON:0003528!5.71e-08!29;UBERON:0001893!5.71e-08!29;UBERON:0003056!8.40e-08!49;UBERON:0001948!1.15e-07!5;UBERON:0002315!1.15e-07!5;UBERON:0000033!1.83e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.14e-17,5;UBERON:0002435,5.14e-17,5;UBERON:0000204,5.14e-17,5;UBERON:0010082,5.14e-17,5;UBERON:0002420,7.05e-11,8;UBERON:0007245,7.05e-11,8;UBERON:0010009,7.05e-11,8;UBERON:0010011,7.05e-11,8;UBERON:0000454,7.05e-11,8;UBERON:0001017,2.42e-07,73;UBERON:0001016,3.93e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,4.45096213891115,2.11596391708813,1.90149421051854,0,0,0,0,0,6.2916023208865,7.68436610643109,0,0.405017814995072,0,0.856952953211411,0.220868540951614,0.367472397644862,0.670918297127655,0,0,0.255374676170375,0.307213066512487,14.9031505135119,11.8933936683133,11.4600941522487,0,0,0.45839474333043,0.589257170947335,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.753926112677186,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07323644815771,0,0,0,0,0,0,0,0,0.483168241652012,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.853668028770671,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.543216455383447,0,0,0.197008964751127,0,0,0,0.499621155875892,0.467863216890817,0.429742108096597,0,0,0|short_description=p8@Dmrtb1}} | ||
|EntrezGene=56296 | |||
|HGNC= | |||
|MCL_coexpression_id=3445 | |||
|UniProt= | |||
|association_with_transcript=88bp_to_ENSMUST00000131508_5end | |||
|description=CAGE_peak_8_at_Dmrtb1_5end | |||
|id=chr4:107353455..107353476,- | |||
|ontology_enrichment_celltype=CL:0000117!2.04e-15!23;CL:0000337!2.04e-15!23;CL:0002319!3.12e-10!43;CL:0000221!7.37e-10!44;CL:0000133!7.37e-10!44;CL:0000540!3.44e-09!33;CL:0000047!3.44e-09!33;CL:0000031!3.44e-09!33;CL:0000404!3.44e-09!33;CL:0000055!5.90e-08!50;CL:0000393!4.78e-07!39;CL:0000211!4.78e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,7.38e-28,3;CL:0000120,3.49e-26,3;CL:0000878,1.06e-18,2;CL:0000129,1.06e-18,2;CL:0000117,1.01e-13,23;CL:0000337,1.01e-13,23;CL:0002319,8.76e-13,43;CL:0000221,1.75e-12,44;CL:0000133,1.75e-12,44;CL:0002194,7.66e-10,4;CL:0000766,7.66e-10,4;CL:0000234,7.66e-10,4;CL:0000576,7.66e-10,4;CL:0000235,7.66e-10,4;CL:0000864,7.66e-10,4;CL:0002009,7.66e-10,4;CL:0000040,7.66e-10,4;CL:0000559,7.66e-10,4;CL:0000540,1.57e-09,33;CL:0000047,1.57e-09,33;CL:0000031,1.57e-09,33;CL:0000404,1.57e-09,33;CL:0000393,4.87e-08,39;CL:0000211,4.87e-08,39;CL:0002321,1.12e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-14!73;UBERON:0005743!1.08e-14!73;UBERON:0000073!4.95e-14!75;UBERON:0001016!4.95e-14!75;UBERON:0002020!1.31e-12!34;UBERON:0001049!2.15e-12!52;UBERON:0005068!2.15e-12!52;UBERON:0006241!2.15e-12!52;UBERON:0007135!2.15e-12!52;UBERON:0002616!1.26e-09!49;UBERON:0000955!2.64e-09!50;UBERON:0006238!2.64e-09!50;UBERON:0004121!4.83e-09!102;UBERON:0000924!4.83e-09!102;UBERON:0006601!4.83e-09!102;UBERON:0003080!7.32e-09!40;UBERON:0002346!1.64e-08!71;UBERON:0003075!1.64e-08!71;UBERON:0007284!1.64e-08!71;UBERON:0002780!3.60e-08!39;UBERON:0001890!3.60e-08!39;UBERON:0006240!3.60e-08!39;UBERON:0002791!5.71e-08!29;UBERON:0003528!5.71e-08!29;UBERON:0001893!5.71e-08!29;UBERON:0003056!8.40e-08!49;UBERON:0001948!1.15e-07!5;UBERON:0002315!1.15e-07!5;UBERON:0000033!1.83e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.14e-17,5;UBERON:0002435,5.14e-17,5;UBERON:0000204,5.14e-17,5;UBERON:0010082,5.14e-17,5;UBERON:0002420,7.05e-11,8;UBERON:0007245,7.05e-11,8;UBERON:0010009,7.05e-11,8;UBERON:0010011,7.05e-11,8;UBERON:0000454,7.05e-11,8;UBERON:0001017,2.42e-07,73;UBERON:0001016,3.93e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,4.45096213891115,2.11596391708813,1.90149421051854,0,0,0,0,0,6.2916023208865,7.68436610643109,0,0.405017814995072,0,0.856952953211411,0.220868540951614,0.367472397644862,0.670918297127655,0,0,0.255374676170375,0.307213066512487,14.9031505135119,11.8933936683133,11.4600941522487,0,0,0.45839474333043,0.589257170947335,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.753926112677186,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07323644815771,0,0,0,0,0,0,0,0,0.483168241652012,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.853668028770671,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.543216455383447,0,0,0.197008964751127,0,0,0,0.499621155875892,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p8@Dmrtb1 | |||
}} |
Revision as of 03:22, 14 September 2013
Short description: | p8@Dmrtb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Dmrtb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3445 |
Association with transcript: | 88bp_to_ENSMUST00000131508_5end |
EntrezGene: | Dmrtb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 7.38e-28 | 3 |
granule cell | 3.49e-26 | 3 |
central nervous system macrophage | 1.06e-18 | 2 |
microglial cell | 1.06e-18 | 2 |
CNS neuron (sensu Vertebrata) | 1.01e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-13 | 23 |
neural cell | 8.76e-13 | 43 |
ectodermal cell | 1.75e-12 | 44 |
neurectodermal cell | 1.75e-12 | 44 |
monopoietic cell | 7.66e-10 | 4 |
myeloid leukocyte | 7.66e-10 | 4 |
phagocyte | 7.66e-10 | 4 |
monocyte | 7.66e-10 | 4 |
macrophage | 7.66e-10 | 4 |
tissue-resident macrophage | 7.66e-10 | 4 |
macrophage dendritic cell progenitor | 7.66e-10 | 4 |
monoblast | 7.66e-10 | 4 |
promonocyte | 7.66e-10 | 4 |
neuron | 1.57e-09 | 33 |
neuronal stem cell | 1.57e-09 | 33 |
neuroblast | 1.57e-09 | 33 |
electrically signaling cell | 1.57e-09 | 33 |
electrically responsive cell | 4.87e-08 | 39 |
electrically active cell | 4.87e-08 | 39 |
embryonic cell | 1.12e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 5.14e-17 | 5 |
striatum | 5.14e-17 | 5 |
ventral part of telencephalon | 5.14e-17 | 5 |
future corpus striatum | 5.14e-17 | 5 |
basal ganglion | 7.05e-11 | 8 |
nuclear complex of neuraxis | 7.05e-11 | 8 |
aggregate regional part of brain | 7.05e-11 | 8 |
collection of basal ganglia | 7.05e-11 | 8 |
cerebral subcortex | 7.05e-11 | 8 |
central nervous system | 2.42e-07 | 73 |
nervous system | 3.93e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.