FFCP PHASE1:Hg19::chr8:126444817..126444834,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10221|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16891|TSSclassifier=W|UniProt=|association_with_transcript=-266bp_to_ENST00000521778_5end|coexpression_cluster_id=C7|description=CAGE_peak_15_at_TRIB1_5end|id=chr8:126444817..126444834,+|ontology_enrichment_celltype=CL:0002057!2.28e-66!42;CL:0000860!2.56e-61!45;CL:0000766!7.29e-53!76;CL:0002194!2.36e-40!63;CL:0000576!2.36e-40!63;CL:0000040!2.36e-40!63;CL:0000559!2.36e-40!63;CL:0002009!7.52e-39!65;CL:0000839!8.27e-38!70;CL:0000557!3.75e-37!71;CL:0000763!1.74e-32!112;CL:0000049!1.74e-32!112;CL:0000738!1.33e-31!140;CL:0002087!1.94e-24!119;CL:0000037!1.46e-23!172;CL:0000566!1.46e-23!172;CL:0000988!7.45e-23!182;CL:0002032!2.22e-22!165;CL:0000837!2.22e-22!165;CL:0002031!1.45e-21!124;CL:0000094!1.02e-17!8;CL:0000081!1.43e-12!11;CL:0000134!1.23e-09!358;CL:0002320!3.21e-09!365;CL:0000767!3.49e-09!3;CL:0000219!6.96e-09!390;CL:0000771!1.96e-07!2|ontology_enrichment_celltype_v019=CL:0000860;6.86e-89;33!CL:0002057;6.86e-89;33!CL:0000473;5.00e-67;39!CL:0000234;5.00e-67;39!CL:0000576;8.73e-46;48!CL:0000766;2.07e-34;69!CL:0000094;3.92e-20;8!CL:0000763;4.21e-15;100!CL:0000081;1.33e-14;11!CL:0000771;2.63e-14;2!CL:0002087;1.42e-12;104!CL:0000738;1.07e-09;136!CL:0000775;1.38e-09;3|ontology_enrichment_celltype_v019_2=CL:0000860,8.31e-92,42;CL:0002057,8.31e-92,42;CL:0000473,9.06e-80,48;CL:0000234,9.06e-80,48;CL:0000766,5.39e-75,72;CL:0002194,6.57e-63,59;CL:0000576,6.57e-63,59;CL:0000040,6.57e-63,59;CL:0000559,6.57e-63,59;CL:0002009,9.86e-61,61;CL:0000839,7.37e-56,66;CL:0000557,5.70e-55,67;CL:0000763,1.28e-48,108;CL:0000049,1.28e-48,108;CL:0000738,1.13e-37,136;CL:0002032,4.36e-31,161;CL:0000837,4.36e-31,161;CL:0002087,2.67e-30,115;CL:0000037,1.37e-29,168;CL:0002031,7.45e-29,120;CL:0000988,7.71e-28,177;CL:0000094,3.41e-20,8;CL:0000081,1.20e-14,11;CL:0000771,2.16e-14,2;CL:0000134,1.89e-12,354;CL:0002320,4.17e-12,361;CL:0000219,6.81e-11,386;CL:0000775,1.50e-09,3;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441|ontology_enrichment_development_v019=CL:0002057;4.68e-65;42!CL:0000049;2.19e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.55e-32!80;UBERON:0001474!4.06e-31!86;UBERON:0002390!3.98e-30!102;UBERON:0003061!3.98e-30!102;UBERON:0002193!7.34e-30!112;UBERON:0004765!3.80e-25!101;UBERON:0001434!3.80e-25!101;UBERON:0002405!6.45e-24!115;UBERON:0002204!1.33e-12!167;UBERON:0003081!2.28e-12!216;UBERON:0002384!1.19e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-48,76;UBERON:0001474,3.34e-44,82;UBERON:0004765,6.56e-40,90;UBERON:0002405,1.73e-38,93;UBERON:0002390,2.62e-36,98;UBERON:0003061,2.62e-36,98;UBERON:0001434,1.70e-35,100;UBERON:0002193,1.51e-32,108;UBERON:0002204,1.87e-19,167;UBERON:0003081,3.57e-15,203;UBERON:0002384,1.23e-11,371;UBERON:0000926,4.50e-08,315;UBERON:0004120,4.50e-08,315;UBERON:0006603,4.50e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.464448369948228,0,0,0,0,0,0,1.10799081706375,2.00544447470142,0.651032612147555,0,0,0,0.145398238779565,0,0,2.09186133215116,3.70051099219643,6.50383378879718,21.2892370318391,8.45330331546032,14.8983804829809,11.0318617835718,7.10033151942209,14.8969135253776,1.50593871634084,0.545812300115692,1.34834090667051,5.20342617030534,2.88836124368484,2.55734850319616,1.31940520074686,0.598390972864896,1.27867425159808,1.7412554317715,1.13477044938228,2.4912889959823,25.8786125214446,15.1230046341858,26.9314167434345,0.605399502633369,0.736555271975129,1.58231193720442,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,15.511210565933,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10221 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16891 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-266bp_to_ENST00000521778_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_15_at_TRIB1_5end | |||
|id=chr8:126444817..126444834,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.28e-66!42;CL:0000860!2.56e-61!45;CL:0000766!7.29e-53!76;CL:0002194!2.36e-40!63;CL:0000576!2.36e-40!63;CL:0000040!2.36e-40!63;CL:0000559!2.36e-40!63;CL:0002009!7.52e-39!65;CL:0000839!8.27e-38!70;CL:0000557!3.75e-37!71;CL:0000763!1.74e-32!112;CL:0000049!1.74e-32!112;CL:0000738!1.33e-31!140;CL:0002087!1.94e-24!119;CL:0000037!1.46e-23!172;CL:0000566!1.46e-23!172;CL:0000988!7.45e-23!182;CL:0002032!2.22e-22!165;CL:0000837!2.22e-22!165;CL:0002031!1.45e-21!124;CL:0000094!1.02e-17!8;CL:0000081!1.43e-12!11;CL:0000134!1.23e-09!358;CL:0002320!3.21e-09!365;CL:0000767!3.49e-09!3;CL:0000219!6.96e-09!390;CL:0000771!1.96e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.86e-89;33!CL:0002057;6.86e-89;33!CL:0000473;5.00e-67;39!CL:0000234;5.00e-67;39!CL:0000576;8.73e-46;48!CL:0000766;2.07e-34;69!CL:0000094;3.92e-20;8!CL:0000763;4.21e-15;100!CL:0000081;1.33e-14;11!CL:0000771;2.63e-14;2!CL:0002087;1.42e-12;104!CL:0000738;1.07e-09;136!CL:0000775;1.38e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.31e-92,42;CL:0002057,8.31e-92,42;CL:0000473,9.06e-80,48;CL:0000234,9.06e-80,48;CL:0000766,5.39e-75,72;CL:0002194,6.57e-63,59;CL:0000576,6.57e-63,59;CL:0000040,6.57e-63,59;CL:0000559,6.57e-63,59;CL:0002009,9.86e-61,61;CL:0000839,7.37e-56,66;CL:0000557,5.70e-55,67;CL:0000763,1.28e-48,108;CL:0000049,1.28e-48,108;CL:0000738,1.13e-37,136;CL:0002032,4.36e-31,161;CL:0000837,4.36e-31,161;CL:0002087,2.67e-30,115;CL:0000037,1.37e-29,168;CL:0002031,7.45e-29,120;CL:0000988,7.71e-28,177;CL:0000094,3.41e-20,8;CL:0000081,1.20e-14,11;CL:0000771,2.16e-14,2;CL:0000134,1.89e-12,354;CL:0002320,4.17e-12,361;CL:0000219,6.81e-11,386;CL:0000775,1.50e-09,3;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.68e-65;42!CL:0000049;2.19e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.55e-32!80;UBERON:0001474!4.06e-31!86;UBERON:0002390!3.98e-30!102;UBERON:0003061!3.98e-30!102;UBERON:0002193!7.34e-30!112;UBERON:0004765!3.80e-25!101;UBERON:0001434!3.80e-25!101;UBERON:0002405!6.45e-24!115;UBERON:0002204!1.33e-12!167;UBERON:0003081!2.28e-12!216;UBERON:0002384!1.19e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-48,76;UBERON:0001474,3.34e-44,82;UBERON:0004765,6.56e-40,90;UBERON:0002405,1.73e-38,93;UBERON:0002390,2.62e-36,98;UBERON:0003061,2.62e-36,98;UBERON:0001434,1.70e-35,100;UBERON:0002193,1.51e-32,108;UBERON:0002204,1.87e-19,167;UBERON:0003081,3.57e-15,203;UBERON:0002384,1.23e-11,371;UBERON:0000926,4.50e-08,315;UBERON:0004120,4.50e-08,315;UBERON:0006603,4.50e-08,315 | |||
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|short_description=p15@TRIB1 | |||
}} |
Revision as of 03:29, 14 September 2013
Short description: | p15@TRIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_TRIB1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -266bp_to_ENST00000521778_5end |
EntrezGene: | TRIB1 |
HGNC: | 16891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.31e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.31e-92 | 42 |
defensive cell | 9.06e-80 | 48 |
phagocyte | 9.06e-80 | 48 |
myeloid leukocyte | 5.39e-75 | 72 |
monopoietic cell | 6.57e-63 | 59 |
monocyte | 6.57e-63 | 59 |
monoblast | 6.57e-63 | 59 |
promonocyte | 6.57e-63 | 59 |
macrophage dendritic cell progenitor | 9.86e-61 | 61 |
myeloid lineage restricted progenitor cell | 7.37e-56 | 66 |
granulocyte monocyte progenitor cell | 5.70e-55 | 67 |
myeloid cell | 1.28e-48 | 108 |
common myeloid progenitor | 1.28e-48 | 108 |
leukocyte | 1.13e-37 | 136 |
hematopoietic oligopotent progenitor cell | 4.36e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-31 | 161 |
nongranular leukocyte | 2.67e-30 | 115 |
hematopoietic stem cell | 1.37e-29 | 168 |
hematopoietic lineage restricted progenitor cell | 7.45e-29 | 120 |
hematopoietic cell | 7.71e-28 | 177 |
granulocyte | 3.41e-20 | 8 |
blood cell | 1.20e-14 | 11 |
eosinophil | 2.16e-14 | 2 |
mesenchymal cell | 1.89e-12 | 354 |
connective tissue cell | 4.17e-12 | 361 |
motile cell | 6.81e-11 | 386 |
neutrophil | 1.50e-09 | 3 |
multi fate stem cell | 2.09e-09 | 427 |
somatic stem cell | 3.35e-09 | 433 |
stem cell | 6.18e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.23e-48 | 76 |
bone element | 3.34e-44 | 82 |
skeletal element | 6.56e-40 | 90 |
immune system | 1.73e-38 | 93 |
hematopoietic system | 2.62e-36 | 98 |
blood island | 2.62e-36 | 98 |
skeletal system | 1.70e-35 | 100 |
hemolymphoid system | 1.51e-32 | 108 |
musculoskeletal system | 1.87e-19 | 167 |
lateral plate mesoderm | 3.57e-15 | 203 |
connective tissue | 1.23e-11 | 371 |
mesoderm | 4.50e-08 | 315 |
mesoderm-derived structure | 4.50e-08 | 315 |
presumptive mesoderm | 4.50e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.