FFCP PHASE1:Mm9::chr4:149944223..149944234,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=918|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:149944223..149944234,-|id=chr4:149944223..149944234,-|ontology_enrichment_celltype=CL:0002031!1.38e-08!25;CL:0000838!1.55e-08!12;CL:0000738!6.34e-08!17;CL:0002087!6.34e-08!17;CL:0000084!1.13e-07!11;CL:0000827!1.13e-07!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000791!7.94e-07!9;CL:0000789!7.94e-07!9;CL:0002420!7.94e-07!9;CL:0002419!7.94e-07!9;CL:0000790!7.94e-07!9|ontology_enrichment_celltype_v019_2=CL:0002031,5.87e-17,25;CL:0002476,1.68e-14,2;CL:0000738,2.39e-14,17;CL:0002087,2.39e-14,17;CL:0000988,4.17e-13,32;CL:0002032,4.17e-13,32;CL:0000037,4.17e-13,32;CL:0000837,4.17e-13,32;CL:0000791,1.16e-12,9;CL:0000789,1.16e-12,9;CL:0002420,1.16e-12,9;CL:0002419,1.16e-12,9;CL:0000790,1.16e-12,9;CL:0002320,2.74e-11,46;CL:0000134,2.74e-11,46;CL:0000084,2.09e-10,11;CL:0000827,2.09e-10,11;CL:0000838,1.47e-09,12;CL:0000219,1.75e-09,54;CL:0000542,7.71e-09,13;CL:0000051,7.71e-09,13;CL:0000839,1.12e-08,13;CL:0000624,1.26e-08,8;CL:0000815,1.56e-08,1;CL:0000792,1.56e-08,1;CL:0000213,3.50e-08,1;CL:0002078,3.50e-08,1;CL:0000115,3.50e-08,1;CL:0002262,3.50e-08,1;CL:1000398,3.50e-08,1;CL:0000625,1.05e-07,1;CL:0002194,1.05e-07,4;CL:0000766,1.05e-07,4;CL:0000234,1.05e-07,4;CL:0000576,1.05e-07,4;CL:0000235,1.05e-07,4;CL:0000864,1.05e-07,4;CL:0002009,1.05e-07,4;CL:0000040,1.05e-07,4;CL:0000559,1.05e-07,4;CL:0000763,4.35e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.87e-10!48;UBERON:0004177!6.34e-10!29;UBERON:0002390!1.21e-09!45;UBERON:0003061!1.21e-09!45;UBERON:0003408!1.37e-08!24;UBERON:0002405!2.60e-08!70;UBERON:0002370!8.97e-08!23;UBERON:0000974!8.97e-08!23;UBERON:0004807!8.97e-08!23;UBERON:0005058!8.97e-08!23;UBERON:0003351!8.97e-08!23;UBERON:0009113!8.97e-08!23;UBERON:0003295!8.97e-08!23;UBERON:0009722!8.97e-08!23;UBERON:0005562!8.97e-08!23;UBERON:0007690!8.97e-08!23;UBERON:0006562!3.03e-07!24;UBERON:0001557!3.03e-07!24;UBERON:0001042!3.03e-07!24;UBERON:0008814!3.03e-07!24;UBERON:0009145!3.03e-07!24;UBERON:0001004!3.43e-07!42;UBERON:0005057!7.30e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.74e-11,46;UBERON:0002390,4.45e-09,45;UBERON:0003061,4.45e-09,45;UBERON:0002193,1.83e-08,48;UBERON:0002405,1.83e-08,48;UBERON:0002394,3.50e-08,1;UBERON:0001281,3.50e-08,1;UBERON:0000353,3.50e-08,1;UBERON:0003497,3.50e-08,1;UBERON:0003909,3.50e-08,1;UBERON:0003928,3.50e-08,1;UBERON:0003835,3.50e-08,1;UBERON:0003513,3.50e-08,1;UBERON:0001280,3.50e-08,1;UBERON:0004647,3.50e-08,1;UBERON:0002294,3.50e-08,1;UBERON:0001173,3.50e-08,1;UBERON:0004912,3.50e-08,1;UBERON:0005171,3.50e-08,1;UBERON:0001044,6.57e-08,1;UBERON:0001736,6.57e-08,1;UBERON:0003293,6.57e-08,1;UBERON:0003294,6.57e-08,1;UBERON:0001829,6.57e-08,1;UBERON:0010047,6.57e-08,1;UBERON:0000167,6.57e-08,1;UBERON:0006298,6.57e-08,1;UBERON:0003408,4.12e-07,24;UBERON:0002371,4.35e-07,16|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.281577444303333,0.70219357896598,0.171217968225505,0.159544317990673,4.10881751834894,4.10875891369288,0,0.607425802169478,0,2.5236973228659,1.64537320326887,0.42438965179803,0.17008658030214,0.0992909512008853,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.671130424230945,0,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0,0,0,0,0.150722640552623,0,0,0.741584903203122,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0.254140454146129,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0.248813941220186,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0.744281895337007,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.289298117163023,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0,0,0,1.24267862617385,0.56369293868419,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,0,0,0,0.179026695667481,0,0.961563596159751,0.147689527174577,0.605798699688886,0.381034033274999,0.403304740547362,0.682205165178267,1.34696578296461,1.28564592399726,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0,0|short_description=p@chr4:149944223..149944234,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=918 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:149944223..149944234,- | |||
|id=chr4:149944223..149944234,- | |||
|ontology_enrichment_celltype=CL:0002031!1.38e-08!25;CL:0000838!1.55e-08!12;CL:0000738!6.34e-08!17;CL:0002087!6.34e-08!17;CL:0000084!1.13e-07!11;CL:0000827!1.13e-07!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000791!7.94e-07!9;CL:0000789!7.94e-07!9;CL:0002420!7.94e-07!9;CL:0002419!7.94e-07!9;CL:0000790!7.94e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.87e-17,25;CL:0002476,1.68e-14,2;CL:0000738,2.39e-14,17;CL:0002087,2.39e-14,17;CL:0000988,4.17e-13,32;CL:0002032,4.17e-13,32;CL:0000037,4.17e-13,32;CL:0000837,4.17e-13,32;CL:0000791,1.16e-12,9;CL:0000789,1.16e-12,9;CL:0002420,1.16e-12,9;CL:0002419,1.16e-12,9;CL:0000790,1.16e-12,9;CL:0002320,2.74e-11,46;CL:0000134,2.74e-11,46;CL:0000084,2.09e-10,11;CL:0000827,2.09e-10,11;CL:0000838,1.47e-09,12;CL:0000219,1.75e-09,54;CL:0000542,7.71e-09,13;CL:0000051,7.71e-09,13;CL:0000839,1.12e-08,13;CL:0000624,1.26e-08,8;CL:0000815,1.56e-08,1;CL:0000792,1.56e-08,1;CL:0000213,3.50e-08,1;CL:0002078,3.50e-08,1;CL:0000115,3.50e-08,1;CL:0002262,3.50e-08,1;CL:1000398,3.50e-08,1;CL:0000625,1.05e-07,1;CL:0002194,1.05e-07,4;CL:0000766,1.05e-07,4;CL:0000234,1.05e-07,4;CL:0000576,1.05e-07,4;CL:0000235,1.05e-07,4;CL:0000864,1.05e-07,4;CL:0002009,1.05e-07,4;CL:0000040,1.05e-07,4;CL:0000559,1.05e-07,4;CL:0000763,4.35e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.87e-10!48;UBERON:0004177!6.34e-10!29;UBERON:0002390!1.21e-09!45;UBERON:0003061!1.21e-09!45;UBERON:0003408!1.37e-08!24;UBERON:0002405!2.60e-08!70;UBERON:0002370!8.97e-08!23;UBERON:0000974!8.97e-08!23;UBERON:0004807!8.97e-08!23;UBERON:0005058!8.97e-08!23;UBERON:0003351!8.97e-08!23;UBERON:0009113!8.97e-08!23;UBERON:0003295!8.97e-08!23;UBERON:0009722!8.97e-08!23;UBERON:0005562!8.97e-08!23;UBERON:0007690!8.97e-08!23;UBERON:0006562!3.03e-07!24;UBERON:0001557!3.03e-07!24;UBERON:0001042!3.03e-07!24;UBERON:0008814!3.03e-07!24;UBERON:0009145!3.03e-07!24;UBERON:0001004!3.43e-07!42;UBERON:0005057!7.30e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.74e-11,46;UBERON:0002390,4.45e-09,45;UBERON:0003061,4.45e-09,45;UBERON:0002193,1.83e-08,48;UBERON:0002405,1.83e-08,48;UBERON:0002394,3.50e-08,1;UBERON:0001281,3.50e-08,1;UBERON:0000353,3.50e-08,1;UBERON:0003497,3.50e-08,1;UBERON:0003909,3.50e-08,1;UBERON:0003928,3.50e-08,1;UBERON:0003835,3.50e-08,1;UBERON:0003513,3.50e-08,1;UBERON:0001280,3.50e-08,1;UBERON:0004647,3.50e-08,1;UBERON:0002294,3.50e-08,1;UBERON:0001173,3.50e-08,1;UBERON:0004912,3.50e-08,1;UBERON:0005171,3.50e-08,1;UBERON:0001044,6.57e-08,1;UBERON:0001736,6.57e-08,1;UBERON:0003293,6.57e-08,1;UBERON:0003294,6.57e-08,1;UBERON:0001829,6.57e-08,1;UBERON:0010047,6.57e-08,1;UBERON:0000167,6.57e-08,1;UBERON:0006298,6.57e-08,1;UBERON:0003408,4.12e-07,24;UBERON:0002371,4.35e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.281577444303333,0.70219357896598,0.171217968225505,0.159544317990673,4.10881751834894,4.10875891369288,0,0.607425802169478,0,2.5236973228659,1.64537320326887,0.42438965179803,0.17008658030214,0.0992909512008853,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.671130424230945,0,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0,0,0,0,0.150722640552623,0,0,0.741584903203122,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0.254140454146129,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0.248813941220186,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0.744281895337007,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.289298117163023,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0,0,0,1.24267862617385,0.56369293868419,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,0,0,0,0.179026695667481,0,0.961563596159751,0.147689527174577,0.605798699688886,0.381034033274999,0.403304740547362,0.682205165178267,1.34696578296461,1.28564592399726,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0,0 | |||
|short_description=p@chr4:149944223..149944234,- | |||
}} |
Revision as of 04:31, 14 September 2013
Short description: | p@chr4:149944223..149944234, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:149944223..149944234, - |
Coexpression cluster: | MCL_coexpression_mm9:918 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.74e-11 | 46 |
hematopoietic system | 4.45e-09 | 45 |
blood island | 4.45e-09 | 45 |
hemolymphoid system | 1.83e-08 | 48 |
immune system | 1.83e-08 | 48 |
bile duct | 3.50e-08 | 1 |
hepatic sinusoid | 3.50e-08 | 1 |
parenchyma | 3.50e-08 | 1 |
abdomen blood vessel | 3.50e-08 | 1 |
sinusoid | 3.50e-08 | 1 |
digestive system duct | 3.50e-08 | 1 |
abdominal segment blood vessel | 3.50e-08 | 1 |
trunk blood vessel | 3.50e-08 | 1 |
liver parenchyma | 3.50e-08 | 1 |
liver lobule | 3.50e-08 | 1 |
biliary system | 3.50e-08 | 1 |
biliary tree | 3.50e-08 | 1 |
biliary bud | 3.50e-08 | 1 |
hepatic duct | 3.50e-08 | 1 |
saliva-secreting gland | 6.57e-08 | 1 |
submandibular gland | 6.57e-08 | 1 |
gland of oral region | 6.57e-08 | 1 |
gland of foregut | 6.57e-08 | 1 |
major salivary gland | 6.57e-08 | 1 |
oral gland | 6.57e-08 | 1 |
oral cavity | 6.57e-08 | 1 |
submandibular gland primordium | 6.57e-08 | 1 |
gland of gut | 4.12e-07 | 24 |
bone marrow | 4.35e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.