FFCP PHASE1:Hg19::chr8:24242010..24242026,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27299|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16299|TSSclassifier=S|UniProt=E5RK05|association_with_transcript=0bp_to_ENST00000520193_5end|coexpression_cluster_id=C67|description=CAGE_peak_1_at_ADAMDEC1_5end|id=chr8:24242010..24242026,+|ontology_enrichment_celltype=CL:0002194!3.53e-53!63;CL:0000576!3.53e-53!63;CL:0000040!3.53e-53!63;CL:0000559!3.53e-53!63;CL:0000766!4.85e-51!76;CL:0002009!5.15e-51!65;CL:0002057!7.16e-49!42;CL:0000839!6.03e-48!70;CL:0000557!5.02e-47!71;CL:0000860!1.14e-44!45;CL:0000763!6.49e-34!112;CL:0000049!6.49e-34!112;CL:0002087!1.20e-30!119;CL:0000738!6.05e-30!140;CL:0002031!3.46e-27!124;CL:0000988!7.76e-24!182;CL:0000037!1.95e-23!172;CL:0000566!1.95e-23!172;CL:0002032!3.24e-23!165;CL:0000837!3.24e-23!165;CL:0002393!4.52e-07!9;CL:0002397!4.52e-07!9|ontology_enrichment_celltype_v019=CL:0000473;1.39e-56;39!CL:0000234;1.39e-56;39!CL:0000860;1.45e-54;33!CL:0002057;1.45e-54;33!CL:0000576;3.00e-40;48!CL:0000766;2.04e-28;69!CL:0000235;1.64e-15;6!CL:0000763;2.15e-15;100!CL:0002087;3.55e-11;104!CL:0002619;3.24e-09;3!CL:0000738;1.65e-08;136!CL:0000767;2.42e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,8.57e-73,48;CL:0000234,8.57e-73,48;CL:0002194,2.27e-66,59;CL:0000576,2.27e-66,59;CL:0000040,2.27e-66,59;CL:0000559,2.27e-66,59;CL:0002009,8.19e-64,61;CL:0000766,2.94e-63,72;CL:0000860,6.74e-59,42;CL:0002057,6.74e-59,42;CL:0000839,4.33e-58,66;CL:0000557,4.79e-57,67;CL:0000763,1.88e-41,108;CL:0000049,1.88e-41,108;CL:0002087,9.89e-35,115;CL:0000738,2.34e-33,136;CL:0002031,1.43e-29,120;CL:0000988,4.19e-27,177;CL:0000037,9.15e-27,168;CL:0002032,6.41e-26,161;CL:0000837,6.41e-26,161;CL:0000235,1.60e-15,6;CL:0002619,3.24e-09,3;CL:0000134,9.26e-08,354;CL:0002320,2.33e-07,361;CL:0000767,2.50e-07,3|ontology_enrichment_development_v019=CL:0002057;5.27e-44;42!CL:0000049;4.88e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.77e-44!102;UBERON:0003061!3.77e-44!102;UBERON:0002193!9.94e-42!112;UBERON:0002371!2.06e-41!80;UBERON:0001474!2.66e-37!86;UBERON:0002405!1.61e-35!115;UBERON:0004765!3.38e-29!101;UBERON:0001434!3.38e-29!101;UBERON:0003081!7.70e-17!216;UBERON:0002204!1.74e-16!167;UBERON:0000926!1.93e-09!448;UBERON:0004120!1.93e-09!448;UBERON:0006603!1.93e-09!448;UBERON:0000059!2.40e-08!11;UBERON:0001155!4.88e-08!9;UBERON:0000062!3.28e-07!511|ontology_enrichment_uberon_v019=UBERON:0000160;3.56e-10;17!UBERON:0005409;3.83e-09;22!UBERON:0000059;7.44e-08;11!UBERON:0004177;1.89e-07;5!UBERON:0005057;1.89e-07;5!UBERON:0004921;3.34e-07;33!UBERON:0001155;5.89e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-51,98;UBERON:0003061,1.28e-51,98;UBERON:0002405,8.32e-51,93;UBERON:0002193,6.51e-50,108;UBERON:0002371,7.00e-49,76;UBERON:0001474,1.99e-44,82;UBERON:0004765,2.08e-39,90;UBERON:0001434,2.90e-34,100;UBERON:0003081,8.49e-22,203;UBERON:0002204,6.37e-19,167;UBERON:0005409,2.73e-11,25;UBERON:0000926,4.69e-11,315;UBERON:0004120,4.69e-11,315;UBERON:0006603,4.69e-11,315;UBERON:0000160,3.62e-10,17;UBERON:0000059,7.58e-08,11;UBERON:0001155,6.01e-07,9;UBERON:0002384,8.08e-07,371|phase1_expression=0.54503513781167,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,2.75354993794233,3.45446458287491,3.09632246632152,0,0,0,0,0,0,26.0377842009982,9.42558903109666,10.4165217943609,930.144879992646,618.636902096251,522.620826729765,1.45398238779565,1.88937971844405,1.4555043671269,11.8538808821899,12.3350366406548,13.9367866902797,126.009267837102,146.780084841175,201.482859865075,20.6847408441971,29.692295444856,31.1480919166986,2.07066573496865,6.27684145133045,7.19115150224271,8.57034898638527,14.1208771913481,10.8687311385837,32.3254274182982,65.4240796998952,33.2455305415501,63.2656140210313,66.9514565135545,67.2648028915221,169.592849048302,178.347158099709,212.845067811014,64.1723472791371,165.356658558417,146.83854777257,0.211255286311942,0.637812899895131,1.46761051855863,0.336985893439485,0,0.32145117339416,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,6.1655941927969,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,223.318824521269,302.333510559895,77.5854667147161,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1085183218262,33.6512251259525,67.4668606345701,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,1.50764638800914,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16299 | |||
|TSSclassifier=S | |||
|UniProt=E5RK05 | |||
|association_with_transcript=0bp_to_ENST00000520193_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_ADAMDEC1_5end | |||
|id=chr8:24242010..24242026,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.53e-53!63;CL:0000576!3.53e-53!63;CL:0000040!3.53e-53!63;CL:0000559!3.53e-53!63;CL:0000766!4.85e-51!76;CL:0002009!5.15e-51!65;CL:0002057!7.16e-49!42;CL:0000839!6.03e-48!70;CL:0000557!5.02e-47!71;CL:0000860!1.14e-44!45;CL:0000763!6.49e-34!112;CL:0000049!6.49e-34!112;CL:0002087!1.20e-30!119;CL:0000738!6.05e-30!140;CL:0002031!3.46e-27!124;CL:0000988!7.76e-24!182;CL:0000037!1.95e-23!172;CL:0000566!1.95e-23!172;CL:0002032!3.24e-23!165;CL:0000837!3.24e-23!165;CL:0002393!4.52e-07!9;CL:0002397!4.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.39e-56;39!CL:0000234;1.39e-56;39!CL:0000860;1.45e-54;33!CL:0002057;1.45e-54;33!CL:0000576;3.00e-40;48!CL:0000766;2.04e-28;69!CL:0000235;1.64e-15;6!CL:0000763;2.15e-15;100!CL:0002087;3.55e-11;104!CL:0002619;3.24e-09;3!CL:0000738;1.65e-08;136!CL:0000767;2.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.57e-73,48;CL:0000234,8.57e-73,48;CL:0002194,2.27e-66,59;CL:0000576,2.27e-66,59;CL:0000040,2.27e-66,59;CL:0000559,2.27e-66,59;CL:0002009,8.19e-64,61;CL:0000766,2.94e-63,72;CL:0000860,6.74e-59,42;CL:0002057,6.74e-59,42;CL:0000839,4.33e-58,66;CL:0000557,4.79e-57,67;CL:0000763,1.88e-41,108;CL:0000049,1.88e-41,108;CL:0002087,9.89e-35,115;CL:0000738,2.34e-33,136;CL:0002031,1.43e-29,120;CL:0000988,4.19e-27,177;CL:0000037,9.15e-27,168;CL:0002032,6.41e-26,161;CL:0000837,6.41e-26,161;CL:0000235,1.60e-15,6;CL:0002619,3.24e-09,3;CL:0000134,9.26e-08,354;CL:0002320,2.33e-07,361;CL:0000767,2.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.27e-44;42!CL:0000049;4.88e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.77e-44!102;UBERON:0003061!3.77e-44!102;UBERON:0002193!9.94e-42!112;UBERON:0002371!2.06e-41!80;UBERON:0001474!2.66e-37!86;UBERON:0002405!1.61e-35!115;UBERON:0004765!3.38e-29!101;UBERON:0001434!3.38e-29!101;UBERON:0003081!7.70e-17!216;UBERON:0002204!1.74e-16!167;UBERON:0000926!1.93e-09!448;UBERON:0004120!1.93e-09!448;UBERON:0006603!1.93e-09!448;UBERON:0000059!2.40e-08!11;UBERON:0001155!4.88e-08!9;UBERON:0000062!3.28e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.56e-10;17!UBERON:0005409;3.83e-09;22!UBERON:0000059;7.44e-08;11!UBERON:0004177;1.89e-07;5!UBERON:0005057;1.89e-07;5!UBERON:0004921;3.34e-07;33!UBERON:0001155;5.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-51,98;UBERON:0003061,1.28e-51,98;UBERON:0002405,8.32e-51,93;UBERON:0002193,6.51e-50,108;UBERON:0002371,7.00e-49,76;UBERON:0001474,1.99e-44,82;UBERON:0004765,2.08e-39,90;UBERON:0001434,2.90e-34,100;UBERON:0003081,8.49e-22,203;UBERON:0002204,6.37e-19,167;UBERON:0005409,2.73e-11,25;UBERON:0000926,4.69e-11,315;UBERON:0004120,4.69e-11,315;UBERON:0006603,4.69e-11,315;UBERON:0000160,3.62e-10,17;UBERON:0000059,7.58e-08,11;UBERON:0001155,6.01e-07,9;UBERON:0002384,8.08e-07,371 | |||
|phase1_expression=0.54503513781167,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,2.75354993794233,3.45446458287491,3.09632246632152,0,0,0,0,0,0,26.0377842009982,9.42558903109666,10.4165217943609,930.144879992646,618.636902096251,522.620826729765,1.45398238779565,1.88937971844405,1.4555043671269,11.8538808821899,12.3350366406548,13.9367866902797,126.009267837102,146.780084841175,201.482859865075,20.6847408441971,29.692295444856,31.1480919166986,2.07066573496865,6.27684145133045,7.19115150224271,8.57034898638527,14.1208771913481,10.8687311385837,32.3254274182982,65.4240796998952,33.2455305415501,63.2656140210313,66.9514565135545,67.2648028915221,169.592849048302,178.347158099709,212.845067811014,64.1723472791371,165.356658558417,146.83854777257,0.211255286311942,0.637812899895131,1.46761051855863,0.336985893439485,0,0.32145117339416,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,6.1655941927969,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,223.318824521269,302.333510559895,77.5854667147161,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1085183218262,33.6512251259525,67.4668606345701,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,1.50764638800914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80428461064202,2.66818894508611,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60643540767028,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,2.19629623788844,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1490322207942,0,0,1.40398589056729,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.597743964753209,80.9511872506263,0,0,0.246169610922139,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.230850775511391,1.93701494939902,0,0,0,0,2.74792780205587,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,74.6446448308879,100.576250840297,337.288640003361,1.48260564340311,2.10058696209055,0.939797545549098,0.067401132980677,0,0,0,0,0,0,142.769044937423,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60181118851542,0.157204305099666,1.65695622138878,26.2967991560334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,15.9022902826975,0.685952037749674,0,0,0,0,0.39246546425257,0,0,57.5289993920982,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,215.624597753597,221.619394351013,0,0,0,0,0,0,0,7.23676168444873,4.25422060625609,0.199882311849858,0,0,0,1.46067277649303,1.37618785021362,0,0,0,0,176.165937891628,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,1.74390056557216,4.09693114352662,0.112131862580613,0,0,0.870866991587845,0,7.40872583160463,0.932388670104793,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,3.62292828463847,0 | |||
|short_description=p1@ADAMDEC1 | |||
}} |
Revision as of 04:45, 14 September 2013
Short description: | p1@ADAMDEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ADAMDEC1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000520193_5end |
EntrezGene: | ADAMDEC1 |
HGNC: | 16299 |
UniProt: | E5RK05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.57e-73 | 48 |
phagocyte | 8.57e-73 | 48 |
monopoietic cell | 2.27e-66 | 59 |
monocyte | 2.27e-66 | 59 |
monoblast | 2.27e-66 | 59 |
promonocyte | 2.27e-66 | 59 |
macrophage dendritic cell progenitor | 8.19e-64 | 61 |
myeloid leukocyte | 2.94e-63 | 72 |
classical monocyte | 6.74e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.74e-59 | 42 |
myeloid lineage restricted progenitor cell | 4.33e-58 | 66 |
granulocyte monocyte progenitor cell | 4.79e-57 | 67 |
myeloid cell | 1.88e-41 | 108 |
common myeloid progenitor | 1.88e-41 | 108 |
nongranular leukocyte | 9.89e-35 | 115 |
leukocyte | 2.34e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 1.43e-29 | 120 |
hematopoietic cell | 4.19e-27 | 177 |
hematopoietic stem cell | 9.15e-27 | 168 |
hematopoietic oligopotent progenitor cell | 6.41e-26 | 161 |
hematopoietic multipotent progenitor cell | 6.41e-26 | 161 |
macrophage | 1.60e-15 | 6 |
adult endothelial progenitor cell | 3.24e-09 | 3 |
mesenchymal cell | 9.26e-08 | 354 |
connective tissue cell | 2.33e-07 | 361 |
basophil | 2.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-51 | 98 |
blood island | 1.28e-51 | 98 |
immune system | 8.32e-51 | 93 |
hemolymphoid system | 6.51e-50 | 108 |
bone marrow | 7.00e-49 | 76 |
bone element | 1.99e-44 | 82 |
skeletal element | 2.08e-39 | 90 |
skeletal system | 2.90e-34 | 100 |
lateral plate mesoderm | 8.49e-22 | 203 |
musculoskeletal system | 6.37e-19 | 167 |
gastrointestinal system | 2.73e-11 | 25 |
mesoderm | 4.69e-11 | 315 |
mesoderm-derived structure | 4.69e-11 | 315 |
presumptive mesoderm | 4.69e-11 | 315 |
intestine | 3.62e-10 | 17 |
large intestine | 7.58e-08 | 11 |
colon | 6.01e-07 | 9 |
connective tissue | 8.08e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.