FFCP PHASE1:Mm9::chr5:122952171..122952185,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11938|HGNC=|MCL_coexpression_id=405|UniProt=F8WI94|association_with_transcript=0bp_to_ENSMUST00000031423_5end|description=CAGE_peak_2_at_Atp2a2_5end|id=chr5:122952171..122952185,-|ontology_enrichment_celltype=CL:0000117!4.50e-07!23;CL:0000337!4.50e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.49e-07,23;CL:0000337,4.49e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.60e-13!73;UBERON:0005743!3.60e-13!73;UBERON:0001049!1.42e-12!52;UBERON:0005068!1.42e-12!52;UBERON:0006241!1.42e-12!52;UBERON:0007135!1.42e-12!52;UBERON:0000033!2.69e-12!63;UBERON:0000073!3.51e-12!75;UBERON:0001016!3.51e-12!75;UBERON:0004111!6.54e-12!122;UBERON:0000955!8.29e-12!50;UBERON:0006238!8.29e-12!50;UBERON:0002020!9.53e-12!34;UBERON:0002616!2.45e-11!49;UBERON:0000025!3.93e-11!114;UBERON:0004121!1.54e-10!102;UBERON:0000924!1.54e-10!102;UBERON:0006601!1.54e-10!102;UBERON:0002346!6.45e-10!71;UBERON:0003075!6.45e-10!71;UBERON:0007284!6.45e-10!71;UBERON:0007100!1.60e-09!18;UBERON:0000948!1.60e-09!18;UBERON:0005498!1.60e-09!18;UBERON:0004140!1.60e-09!18;UBERON:0009881!1.60e-09!18;UBERON:0004141!1.60e-09!18;UBERON:0003084!1.60e-09!18;UBERON:0007005!1.60e-09!18;UBERON:0004139!1.60e-09!18;UBERON:0004291!1.60e-09!18;UBERON:0002791!1.75e-09!29;UBERON:0003528!1.75e-09!29;UBERON:0001893!1.75e-09!29;UBERON:0003080!1.91e-09!40;UBERON:0003056!3.02e-09!49;UBERON:0002780!5.44e-09!39;UBERON:0001890!5.44e-09!39;UBERON:0006240!5.44e-09!39;UBERON:0000468!1.66e-08!333;UBERON:0003103!9.80e-08!43;UBERON:0002021!2.08e-07!10;UBERON:0000411!2.08e-07!10;UBERON:0001950!2.08e-07!10;UBERON:0000956!7.55e-07!21;UBERON:0001869!7.55e-07!21;UBERON:0000203!7.55e-07!21;UBERON:0002619!7.81e-07!17;UBERON:0000922!8.58e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.90e-18,92;UBERON:0000073,1.38e-13,54;UBERON:0001017,3.51e-13,73;UBERON:0001049,1.42e-12,52;UBERON:0005068,1.42e-12,52;UBERON:0006241,1.42e-12,52;UBERON:0007135,1.42e-12,52;UBERON:0001016,3.43e-12,75;UBERON:0004111,6.53e-12,122;UBERON:0002020,9.52e-12,34;UBERON:0004121,3.05e-11,95;UBERON:0000924,3.05e-11,95;UBERON:0006601,3.05e-11,95;UBERON:0000025,3.92e-11,114;UBERON:0002346,6.34e-11,64;UBERON:0003075,6.34e-11,64;UBERON:0007284,6.34e-11,64;UBERON:0000955,2.18e-10,47;UBERON:0006238,2.18e-10,47;UBERON:0010371,3.36e-10,73;UBERON:0002616,6.18e-10,46;UBERON:0007100,1.60e-09,18;UBERON:0000948,1.60e-09,18;UBERON:0005498,1.60e-09,18;UBERON:0004140,1.60e-09,18;UBERON:0009881,1.60e-09,18;UBERON:0004141,1.60e-09,18;UBERON:0003084,1.60e-09,18;UBERON:0007005,1.60e-09,18;UBERON:0004139,1.60e-09,18;UBERON:0004291,1.60e-09,18;UBERON:0003528,1.75e-09,29;UBERON:0002791,1.75e-09,29;UBERON:0001893,1.75e-09,29;UBERON:0003080,1.91e-09,40;UBERON:0003056,3.01e-09,49;UBERON:0002780,5.43e-09,39;UBERON:0001890,5.43e-09,39;UBERON:0006240,5.43e-09,39;UBERON:0003103,9.58e-08,43;UBERON:0002021,2.08e-07,10;UBERON:0000411,2.08e-07,10;UBERON:0001950,2.08e-07,10;UBERON:0000956,7.55e-07,21;UBERON:0001869,7.55e-07,21;UBERON:0000203,7.55e-07,21;UBERON:0002619,7.81e-07,17|phase1_expression=7.20669811971573,7.67745896806594,8.64498554840118,9.0739263392049,8.01433167914156,9.40123922706583,6.30754129607919,2.1950964985068,7.03943610758334,5.38348410540585,4.10923123741212,6.06268408364557,1.54080656938085,1.92324885321794,3.33109761815663,1.82227740650843,2.79824751251259,1.57731082679119,2.19383093769182,1.69755860719212,7.82398269389842,1.58865521921416,1.30599894569468,3.83981814704176,4.81759490241057,9.76194338995534,6.46142994238612,5.817723282519,5.89072600314759,10.0812051903972,11.5299865540758,3.17515336729816,6.1506478758457,0,2.59966457776147,2.99222361645286,4.28755648150975,2.51118978442145,0.7813353445238,2.09409497589519,0,0.683045484958446,0.485510353031154,3.52511090331616,2.73717714292689,5.13930906052708,1.56478268869608,3.48840250208714,4.61340983742391,3.69416808241138,5.45947044338914,0,2.68452169692378,2.17608642603403,2.35265659399725,4.63066984864705,7.16333599846892,6.18806510732931,7.89034197352431,8.46385566835253,10.775133859605,1.35537812827653,2.66788438833342,4.49949858640699,0.988866362566974,2.8419204597844,4.19440154725767,2.30530983192933,4.66603255388149,6.07526722492608,5.46844899513593,12.5686433137674,14.1355866209033,5.63457676388789,6.22995561618536,8.27296907949019,9.91042928994498,23.4944702076745,24.1162257212302,8.04506355154182,6.49562269577109,6.77187381723788,13.6799669510677,12.9435400307286,11.3070703354839,19.4454866412621,15.0913981647049,9.87917062874093,3.10477392666055,3.17400552448499,1.44932244350839,6.88339101585109,7.47968467078526,4.85732872474035,5.84798775702902,6.72040330646003,3.08977724289854,1.87473354835864,0.779358013808606,0.35333957451034,8.59144860637751,1.28326477414318,0,0,4.11332977921307,4.05375784760158,4.04419556011827,5.82337786567206,2.33044095282455,3.85949561568544,5.55153045651635,5.78484408793068,2.99800146432876,4.37095657602605,6.82014501387088,4.77533047052767,1.73036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| ||
|EntrezGene=11938 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|UniProt=F8WI94 | |||
|association_with_transcript=0bp_to_ENSMUST00000031423_5end | |||
|description=CAGE_peak_2_at_Atp2a2_5end | |||
|id=chr5:122952171..122952185,- | |||
|ontology_enrichment_celltype=CL:0000117!4.50e-07!23;CL:0000337!4.50e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.49e-07,23;CL:0000337,4.49e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.60e-13!73;UBERON:0005743!3.60e-13!73;UBERON:0001049!1.42e-12!52;UBERON:0005068!1.42e-12!52;UBERON:0006241!1.42e-12!52;UBERON:0007135!1.42e-12!52;UBERON:0000033!2.69e-12!63;UBERON:0000073!3.51e-12!75;UBERON:0001016!3.51e-12!75;UBERON:0004111!6.54e-12!122;UBERON:0000955!8.29e-12!50;UBERON:0006238!8.29e-12!50;UBERON:0002020!9.53e-12!34;UBERON:0002616!2.45e-11!49;UBERON:0000025!3.93e-11!114;UBERON:0004121!1.54e-10!102;UBERON:0000924!1.54e-10!102;UBERON:0006601!1.54e-10!102;UBERON:0002346!6.45e-10!71;UBERON:0003075!6.45e-10!71;UBERON:0007284!6.45e-10!71;UBERON:0007100!1.60e-09!18;UBERON:0000948!1.60e-09!18;UBERON:0005498!1.60e-09!18;UBERON:0004140!1.60e-09!18;UBERON:0009881!1.60e-09!18;UBERON:0004141!1.60e-09!18;UBERON:0003084!1.60e-09!18;UBERON:0007005!1.60e-09!18;UBERON:0004139!1.60e-09!18;UBERON:0004291!1.60e-09!18;UBERON:0002791!1.75e-09!29;UBERON:0003528!1.75e-09!29;UBERON:0001893!1.75e-09!29;UBERON:0003080!1.91e-09!40;UBERON:0003056!3.02e-09!49;UBERON:0002780!5.44e-09!39;UBERON:0001890!5.44e-09!39;UBERON:0006240!5.44e-09!39;UBERON:0000468!1.66e-08!333;UBERON:0003103!9.80e-08!43;UBERON:0002021!2.08e-07!10;UBERON:0000411!2.08e-07!10;UBERON:0001950!2.08e-07!10;UBERON:0000956!7.55e-07!21;UBERON:0001869!7.55e-07!21;UBERON:0000203!7.55e-07!21;UBERON:0002619!7.81e-07!17;UBERON:0000922!8.58e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.90e-18,92;UBERON:0000073,1.38e-13,54;UBERON:0001017,3.51e-13,73;UBERON:0001049,1.42e-12,52;UBERON:0005068,1.42e-12,52;UBERON:0006241,1.42e-12,52;UBERON:0007135,1.42e-12,52;UBERON:0001016,3.43e-12,75;UBERON:0004111,6.53e-12,122;UBERON:0002020,9.52e-12,34;UBERON:0004121,3.05e-11,95;UBERON:0000924,3.05e-11,95;UBERON:0006601,3.05e-11,95;UBERON:0000025,3.92e-11,114;UBERON:0002346,6.34e-11,64;UBERON:0003075,6.34e-11,64;UBERON:0007284,6.34e-11,64;UBERON:0000955,2.18e-10,47;UBERON:0006238,2.18e-10,47;UBERON:0010371,3.36e-10,73;UBERON:0002616,6.18e-10,46;UBERON:0007100,1.60e-09,18;UBERON:0000948,1.60e-09,18;UBERON:0005498,1.60e-09,18;UBERON:0004140,1.60e-09,18;UBERON:0009881,1.60e-09,18;UBERON:0004141,1.60e-09,18;UBERON:0003084,1.60e-09,18;UBERON:0007005,1.60e-09,18;UBERON:0004139,1.60e-09,18;UBERON:0004291,1.60e-09,18;UBERON:0003528,1.75e-09,29;UBERON:0002791,1.75e-09,29;UBERON:0001893,1.75e-09,29;UBERON:0003080,1.91e-09,40;UBERON:0003056,3.01e-09,49;UBERON:0002780,5.43e-09,39;UBERON:0001890,5.43e-09,39;UBERON:0006240,5.43e-09,39;UBERON:0003103,9.58e-08,43;UBERON:0002021,2.08e-07,10;UBERON:0000411,2.08e-07,10;UBERON:0001950,2.08e-07,10;UBERON:0000956,7.55e-07,21;UBERON:0001869,7.55e-07,21;UBERON:0000203,7.55e-07,21;UBERON:0002619,7.81e-07,17 | |||
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| |||
|short_description=p2@Atp2a2 | |||
}} |
Revision as of 06:20, 14 September 2013
Short description: | p2@Atp2a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atp2a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | 0bp_to_ENSMUST00000031423_5end |
EntrezGene: | Atp2a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.49e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.49e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.