FFCP PHASE1:Mm9::chr6:37682625..37682629,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=210|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:37682625..37682629,+|id=chr6:37682625..37682629,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,1.54e-11,19;CL:0000213,1.63e-10,1;CL:0002078,1.63e-10,1;CL:0000115,1.63e-10,1;CL:0002262,1.63e-10,1;CL:1000398,1.63e-10,1;CL:0000034,6.95e-07,97;CL:0000988,7.10e-07,32;CL:0002032,7.10e-07,32;CL:0000037,7.10e-07,32;CL:0000837,7.10e-07,32;CL:0002320,9.67e-07,46;CL:0000134,9.67e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.63e-10,1;UBERON:0001281,1.63e-10,1;UBERON:0000353,1.63e-10,1;UBERON:0003497,1.63e-10,1;UBERON:0003909,1.63e-10,1;UBERON:0003928,1.63e-10,1;UBERON:0003835,1.63e-10,1;UBERON:0003513,1.63e-10,1;UBERON:0001280,1.63e-10,1;UBERON:0004647,1.63e-10,1;UBERON:0002294,1.63e-10,1;UBERON:0001173,1.63e-10,1;UBERON:0004912,1.63e-10,1;UBERON:0005171,1.63e-10,1;UBERON:0002384,9.67e-07,46|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.703943610758334,0.234064526321993,0.34243593645101,0.319088635981346,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.226714680320357,24.9283460283443,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,6.58983184782562,7.19883277192089,4.3203877204842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,0.852490498186778,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0,12.0684685295637,12.1757763521582,6.63359874261234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr6:37682625..37682629,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:37682625..37682629,+ | |||
|id=chr6:37682625..37682629,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.54e-11,19;CL:0000213,1.63e-10,1;CL:0002078,1.63e-10,1;CL:0000115,1.63e-10,1;CL:0002262,1.63e-10,1;CL:1000398,1.63e-10,1;CL:0000034,6.95e-07,97;CL:0000988,7.10e-07,32;CL:0002032,7.10e-07,32;CL:0000037,7.10e-07,32;CL:0000837,7.10e-07,32;CL:0002320,9.67e-07,46;CL:0000134,9.67e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.63e-10,1;UBERON:0001281,1.63e-10,1;UBERON:0000353,1.63e-10,1;UBERON:0003497,1.63e-10,1;UBERON:0003909,1.63e-10,1;UBERON:0003928,1.63e-10,1;UBERON:0003835,1.63e-10,1;UBERON:0003513,1.63e-10,1;UBERON:0001280,1.63e-10,1;UBERON:0004647,1.63e-10,1;UBERON:0002294,1.63e-10,1;UBERON:0001173,1.63e-10,1;UBERON:0004912,1.63e-10,1;UBERON:0005171,1.63e-10,1;UBERON:0002384,9.67e-07,46 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.703943610758334,0.234064526321993,0.34243593645101,0.319088635981346,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.226714680320357,24.9283460283443,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,6.58983184782562,7.19883277192089,4.3203877204842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,0.852490498186778,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0,12.0684685295637,12.1757763521582,6.63359874261234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr6:37682625..37682629,+ | |||
}} |
Revision as of 09:44, 14 September 2013
Short description: | p@chr6:37682625..37682629, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:37682625..37682629, + |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.54e-11 | 19 |
lining cell | 1.63e-10 | 1 |
meso-epithelial cell | 1.63e-10 | 1 |
endothelial cell | 1.63e-10 | 1 |
endothelial cell of sinusoid | 1.63e-10 | 1 |
endothelial cell of hepatic sinusoid | 1.63e-10 | 1 |
stem cell | 6.95e-07 | 97 |
hematopoietic cell | 7.10e-07 | 32 |
hematopoietic oligopotent progenitor cell | 7.10e-07 | 32 |
hematopoietic stem cell | 7.10e-07 | 32 |
hematopoietic multipotent progenitor cell | 7.10e-07 | 32 |
connective tissue cell | 9.67e-07 | 46 |
mesenchymal cell | 9.67e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.63e-10 | 1 |
hepatic sinusoid | 1.63e-10 | 1 |
parenchyma | 1.63e-10 | 1 |
abdomen blood vessel | 1.63e-10 | 1 |
sinusoid | 1.63e-10 | 1 |
digestive system duct | 1.63e-10 | 1 |
abdominal segment blood vessel | 1.63e-10 | 1 |
trunk blood vessel | 1.63e-10 | 1 |
liver parenchyma | 1.63e-10 | 1 |
liver lobule | 1.63e-10 | 1 |
biliary system | 1.63e-10 | 1 |
biliary tree | 1.63e-10 | 1 |
biliary bud | 1.63e-10 | 1 |
hepatic duct | 1.63e-10 | 1 |
connective tissue | 9.67e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.