FFCP PHASE1:Mm9::chr6:83276023..83276058,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232157|HGNC=|MCL_coexpression_id=586|UniProt=Q921Y0,Q3UDM0|association_with_transcript=0bp_to_ENSMUST00000133045,NM_145571,uc009cnf.1,uc012eny.1_5end|description=CAGE_peak_1_at_Mob1a_5end|id=chr6:83276023..83276058,+|ontology_enrichment_celltype=CL:0000063!8.38e-14!66;CL:0000838!2.53e-08!12;CL:0002320!5.52e-08!46;CL:0000134!5.52e-08!46;CL:0000084!1.09e-07!11;CL:0000827!1.09e-07!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000988!2.18e-07!32;CL:0002032!2.18e-07!32;CL:0000037!2.18e-07!32;CL:0000566!2.18e-07!32;CL:0000837!2.18e-07!32;CL:0002031!3.49e-07!25;CL:0000738!6.19e-07!17;CL:0002087!6.19e-07!17;CL:0000219!8.09e-07!54;CL:0000791!8.15e-07!9;CL:0000789!8.15e-07!9;CL:0002420!8.15e-07!9;CL:0002419!8.15e-07!9;CL:0000790!8.15e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,2.53e-08,12;CL:0002320,5.52e-08,46;CL:0000134,5.52e-08,46;CL:0000084,1.09e-07,11;CL:0000827,1.09e-07,11;CL:0000542,1.27e-07,13;CL:0000051,1.27e-07,13;CL:0000988,2.18e-07,32;CL:0002032,2.18e-07,32;CL:0000037,2.18e-07,32;CL:0000837,2.18e-07,32;CL:0002031,3.49e-07,25;CL:0000738,6.19e-07,17;CL:0002087,6.19e-07,17;CL:0000219,8.09e-07,54;CL:0000791,8.15e-07,9;CL:0000789,8.15e-07,9;CL:0002420,8.15e-07,9;CL:0002419,8.15e-07,9;CL:0000790,8.15e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.75e-13!130;UBERON:0000925!1.75e-13!130;UBERON:0006595!1.75e-13!130;UBERON:0002193!5.70e-13!48;UBERON:0001007!7.77e-13!128;UBERON:0001555!7.77e-13!128;UBERON:0007026!7.77e-13!128;UBERON:0004921!3.00e-12!126;UBERON:0004185!3.00e-12!126;UBERON:0002390!7.34e-12!45;UBERON:0003061!7.34e-12!45;UBERON:0002405!6.01e-11!70;UBERON:0000926!2.22e-10!193;UBERON:0004120!2.22e-10!193;UBERON:0006603!2.22e-10!193;UBERON:0001004!2.23e-10!42;UBERON:0000065!3.17e-10!41;UBERON:0005911!4.44e-10!69;UBERON:0000490!6.84e-10!66;UBERON:0003104!7.04e-10!131;UBERON:0009142!7.04e-10!131;UBERON:0004177!1.57e-08!29;UBERON:0002384!5.52e-08!46;UBERON:0000077!7.29e-08!97;UBERON:0003081!9.14e-08!88;UBERON:0004923!1.15e-07!24;UBERON:0000072!1.50e-07!27;UBERON:0003929!2.75e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.12e-18,118;UBERON:0000925,4.12e-18,118;UBERON:0006595,4.12e-18,118;UBERON:0001007,2.24e-17,116;UBERON:0001555,2.24e-17,116;UBERON:0007026,2.24e-17,116;UBERON:0004921,1.04e-16,114;UBERON:0002193,5.70e-13,48;UBERON:0002405,5.70e-13,48;UBERON:0002390,7.34e-12,45;UBERON:0003061,7.34e-12,45;UBERON:0001041,1.72e-10,80;UBERON:0000077,2.04e-10,35;UBERON:0001004,2.23e-10,42;UBERON:0000065,3.17e-10,41;UBERON:0005911,4.44e-10,69;UBERON:0000490,6.84e-10,66;UBERON:0000926,2.82e-09,120;UBERON:0004120,2.82e-09,120;UBERON:0006603,2.82e-09,120;UBERON:0004177,1.57e-08,29;UBERON:0005057,1.57e-08,29;UBERON:0002384,5.52e-08,46;UBERON:0004923,1.15e-07,24;UBERON:0000072,1.50e-07,27;UBERON:0003081,2.20e-07,87;UBERON:0003929,2.75e-07,55|phase1_expression=38.2755744580458,51.2993849229861,60.9698980781978,51.7213801334679,70.626297922435,61.7795720635754,58.6367727894769,101.620055548521,122.626976994102,99.7114882131692,98.6215496978909,103.783578852933,108.198861316522,89.4310716746343,60.9590864122663,64.9945608321341,69.9561878128147,117.351925513264,132.452542863144,119.677881807045,30.1903680036298,65.2341549389816,74.7031396937355,57.5972722056264,52.7641346454491,51.1066448062368,54.2760115160434,58.17723282519,59.2873068703887,71.8285869815803,43.4591800884397,13.9706748161119,15.3766196896143,0,48.8159237379654,56.3535447765289,48.5923067904438,215.543789829507,178.92579389595,196.321403990174,285.880503183073,285.51301271263,251.008852517106,49.3515526464263,53.0201350278061,38.1777244496298,23.4717403304412,27.4711697039363,26.3623419281366,30.9143539528111,48.5752883040008,34.5006154475932,119.796780725224,94.2970784614748,101.164233541882,57.6261136720521,79.9428297429131,68.5843882728998,12.7459370341547,11.1088105647127,13.3104594736298,35.5786758672589,35.5717918444456,48.5945847331955,63.2874472042864,51.1545682761192,32.0572118254693,14.6002956022191,23.7449212186414,21.8709620097339,22.2944459032465,15.7108041422092,17.2277461942259,19.7210186736076,24.6322860516867,21.1420320920305,13.2139057199266,15.4501679083077,11.8277030607307,12.924856197559,16.2848005612289,16.1483144872596,14.2383329490704,12.9435400307286,14.3630352910202,25.0434297652618,20.3591503542717,14.7255562201987,71.182621733193,56.0740975992349,80.0025988816631,49.044160987939,38.078394687634,27.5248627735287,25.9910566979068,37.6342585161762,32.3022166303029,73.796329676299,77.4162293716549,66.7811795824543,37.1826628210436,79.562415996877,81.5376767061266,106.660005473,77.5037926820146,74.7411603151541,67.740275631981,38.3657835856041,85.1905637199195,40.8215882428268,36.0849479673563,38.6671157456419,38.0515570472497,40.2429450275502,43.3902329330751,48.2559710705954,65.2594714818747,42.512210934454,70.7688441559899,41.4123135865367,48.1434510243658,35.8807687320064,46.5979403045305,9.36898550436951,13.614035942874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| ||
|EntrezGene=232157 | |||
|HGNC= | |||
|MCL_coexpression_id=586 | |||
|UniProt=Q921Y0,Q3UDM0 | |||
|association_with_transcript=0bp_to_ENSMUST00000133045,NM_145571,uc009cnf.1,uc012eny.1_5end | |||
|description=CAGE_peak_1_at_Mob1a_5end | |||
|id=chr6:83276023..83276058,+ | |||
|ontology_enrichment_celltype=CL:0000063!8.38e-14!66;CL:0000838!2.53e-08!12;CL:0002320!5.52e-08!46;CL:0000134!5.52e-08!46;CL:0000084!1.09e-07!11;CL:0000827!1.09e-07!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000988!2.18e-07!32;CL:0002032!2.18e-07!32;CL:0000037!2.18e-07!32;CL:0000566!2.18e-07!32;CL:0000837!2.18e-07!32;CL:0002031!3.49e-07!25;CL:0000738!6.19e-07!17;CL:0002087!6.19e-07!17;CL:0000219!8.09e-07!54;CL:0000791!8.15e-07!9;CL:0000789!8.15e-07!9;CL:0002420!8.15e-07!9;CL:0002419!8.15e-07!9;CL:0000790!8.15e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.53e-08,12;CL:0002320,5.52e-08,46;CL:0000134,5.52e-08,46;CL:0000084,1.09e-07,11;CL:0000827,1.09e-07,11;CL:0000542,1.27e-07,13;CL:0000051,1.27e-07,13;CL:0000988,2.18e-07,32;CL:0002032,2.18e-07,32;CL:0000037,2.18e-07,32;CL:0000837,2.18e-07,32;CL:0002031,3.49e-07,25;CL:0000738,6.19e-07,17;CL:0002087,6.19e-07,17;CL:0000219,8.09e-07,54;CL:0000791,8.15e-07,9;CL:0000789,8.15e-07,9;CL:0002420,8.15e-07,9;CL:0002419,8.15e-07,9;CL:0000790,8.15e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.75e-13!130;UBERON:0000925!1.75e-13!130;UBERON:0006595!1.75e-13!130;UBERON:0002193!5.70e-13!48;UBERON:0001007!7.77e-13!128;UBERON:0001555!7.77e-13!128;UBERON:0007026!7.77e-13!128;UBERON:0004921!3.00e-12!126;UBERON:0004185!3.00e-12!126;UBERON:0002390!7.34e-12!45;UBERON:0003061!7.34e-12!45;UBERON:0002405!6.01e-11!70;UBERON:0000926!2.22e-10!193;UBERON:0004120!2.22e-10!193;UBERON:0006603!2.22e-10!193;UBERON:0001004!2.23e-10!42;UBERON:0000065!3.17e-10!41;UBERON:0005911!4.44e-10!69;UBERON:0000490!6.84e-10!66;UBERON:0003104!7.04e-10!131;UBERON:0009142!7.04e-10!131;UBERON:0004177!1.57e-08!29;UBERON:0002384!5.52e-08!46;UBERON:0000077!7.29e-08!97;UBERON:0003081!9.14e-08!88;UBERON:0004923!1.15e-07!24;UBERON:0000072!1.50e-07!27;UBERON:0003929!2.75e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.12e-18,118;UBERON:0000925,4.12e-18,118;UBERON:0006595,4.12e-18,118;UBERON:0001007,2.24e-17,116;UBERON:0001555,2.24e-17,116;UBERON:0007026,2.24e-17,116;UBERON:0004921,1.04e-16,114;UBERON:0002193,5.70e-13,48;UBERON:0002405,5.70e-13,48;UBERON:0002390,7.34e-12,45;UBERON:0003061,7.34e-12,45;UBERON:0001041,1.72e-10,80;UBERON:0000077,2.04e-10,35;UBERON:0001004,2.23e-10,42;UBERON:0000065,3.17e-10,41;UBERON:0005911,4.44e-10,69;UBERON:0000490,6.84e-10,66;UBERON:0000926,2.82e-09,120;UBERON:0004120,2.82e-09,120;UBERON:0006603,2.82e-09,120;UBERON:0004177,1.57e-08,29;UBERON:0005057,1.57e-08,29;UBERON:0002384,5.52e-08,46;UBERON:0004923,1.15e-07,24;UBERON:0000072,1.50e-07,27;UBERON:0003081,2.20e-07,87;UBERON:0003929,2.75e-07,55 | |||
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| |||
|short_description=p1@Mob1a | |||
}} |
Revision as of 10:44, 14 September 2013
Short description: | p1@Mob1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mob1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:586 |
Association with transcript: | 0bp_to_ENSMUST00000133045, NM_145571, uc009cnf.1, uc012eny.1_5end |
EntrezGene: | Mob1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.53e-08 | 12 |
connective tissue cell | 5.52e-08 | 46 |
mesenchymal cell | 5.52e-08 | 46 |
T cell | 1.09e-07 | 11 |
pro-T cell | 1.09e-07 | 11 |
lymphocyte | 1.27e-07 | 13 |
common lymphoid progenitor | 1.27e-07 | 13 |
hematopoietic cell | 2.18e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.18e-07 | 32 |
hematopoietic stem cell | 2.18e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.18e-07 | 32 |
hematopoietic lineage restricted progenitor cell | 3.49e-07 | 25 |
leukocyte | 6.19e-07 | 17 |
nongranular leukocyte | 6.19e-07 | 17 |
motile cell | 8.09e-07 | 54 |
mature alpha-beta T cell | 8.15e-07 | 9 |
alpha-beta T cell | 8.15e-07 | 9 |
immature T cell | 8.15e-07 | 9 |
mature T cell | 8.15e-07 | 9 |
immature alpha-beta T cell | 8.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.12e-18 | 118 |
endoderm | 4.12e-18 | 118 |
presumptive endoderm | 4.12e-18 | 118 |
digestive system | 2.24e-17 | 116 |
digestive tract | 2.24e-17 | 116 |
primitive gut | 2.24e-17 | 116 |
subdivision of digestive tract | 1.04e-16 | 114 |
hemolymphoid system | 5.70e-13 | 48 |
immune system | 5.70e-13 | 48 |
hematopoietic system | 7.34e-12 | 45 |
blood island | 7.34e-12 | 45 |
foregut | 1.72e-10 | 80 |
mixed endoderm/mesoderm-derived structure | 2.04e-10 | 35 |
respiratory system | 2.23e-10 | 42 |
respiratory tract | 3.17e-10 | 41 |
endo-epithelium | 4.44e-10 | 69 |
unilaminar epithelium | 6.84e-10 | 66 |
mesoderm | 2.82e-09 | 120 |
mesoderm-derived structure | 2.82e-09 | 120 |
presumptive mesoderm | 2.82e-09 | 120 |
hemopoietic organ | 1.57e-08 | 29 |
immune organ | 1.57e-08 | 29 |
connective tissue | 5.52e-08 | 46 |
organ component layer | 1.15e-07 | 24 |
segment of respiratory tract | 1.50e-07 | 27 |
lateral plate mesoderm | 2.20e-07 | 87 |
gut epithelium | 2.75e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.