FFCP PHASE1:Mm9::chr7:150190963..150191010,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27027|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=0bp_to_ENSMUST00000141186_5end|description=CAGE_peak_3_at_Tspan32_5end|id=chr7:150190963..150191010,+|ontology_enrichment_celltype=CL:0000988!9.96e-12!32;CL:0002032!9.96e-12!32;CL:0000037!9.96e-12!32;CL:0000566!9.96e-12!32;CL:0000837!9.96e-12!32;CL:0002031!9.40e-10!25;CL:0000838!6.47e-09!12;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000542!8.18e-08!13;CL:0000051!8.18e-08!13;CL:0000791!3.24e-07!9;CL:0000789!3.24e-07!9;CL:0002420!3.24e-07!9;CL:0002419!3.24e-07!9;CL:0000790!3.24e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,2.04e-21,32;CL:0002032,2.04e-21,32;CL:0000037,2.04e-21,32;CL:0000837,2.04e-21,32;CL:0002031,6.94e-19,25;CL:0000838,7.66e-15,12;CL:0000084,1.71e-13,11;CL:0000827,1.71e-13,11;CL:0000542,1.91e-13,13;CL:0000051,1.91e-13,13;CL:0002320,1.25e-12,46;CL:0000134,1.25e-12,46;CL:0000791,8.80e-12,9;CL:0000789,8.80e-12,9;CL:0002420,8.80e-12,9;CL:0002419,8.80e-12,9;CL:0000790,8.80e-12,9;CL:0000624,8.67e-11,8;CL:0000050,4.18e-10,9;CL:0000219,1.02e-09,54;CL:0000049,1.22e-09,19;CL:0000738,1.58e-09,17;CL:0002087,1.58e-09,17;CL:0000553,8.44e-09,6;CL:0000556,8.44e-09,6;CL:0000763,1.23e-08,16;CL:0000893,5.71e-08,6;CL:0002489,5.71e-08,6;CL:0000898,5.71e-08,6;CL:0000809,5.71e-08,6;CL:0000810,5.71e-08,6;CL:0000895,5.71e-08,6;CL:0000808,5.71e-08,6;CL:0000894,5.71e-08,6;CL:0000806,5.71e-08,6;CL:0000807,5.71e-08,6;CL:0000805,5.71e-08,6;CL:0002425,5.71e-08,6;CL:0002436,5.71e-08,6;CL:0002427,5.71e-08,6;CL:0002428,5.71e-08,6;CL:0002429,5.71e-08,6;CL:0002433,5.71e-08,6;CL:0002431,5.71e-08,6;CL:0002432,5.71e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,5.71e-07,6|ontology_enrichment_uberon=UBERON:0002193!3.88e-12!48;UBERON:0002405!2.17e-11!70;UBERON:0002390!8.47e-11!45;UBERON:0003061!8.47e-11!45;UBERON:0004177!3.77e-10!29;UBERON:0005057!9.31e-09!51;UBERON:0002370!5.76e-07!23;UBERON:0000974!5.76e-07!23;UBERON:0004807!5.76e-07!23;UBERON:0005058!5.76e-07!23;UBERON:0003351!5.76e-07!23;UBERON:0009113!5.76e-07!23;UBERON:0003295!5.76e-07!23;UBERON:0009722!5.76e-07!23;UBERON:0005562!5.76e-07!23;UBERON:0007690!5.76e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.06e-21,48;UBERON:0002405,7.06e-21,48;UBERON:0002390,1.36e-19,45;UBERON:0003061,1.36e-19,45;UBERON:0004177,2.03e-15,29;UBERON:0005057,2.03e-15,29;UBERON:0002384,1.25e-12,46;UBERON:0000077,9.44e-12,35;UBERON:0002370,4.63e-11,23;UBERON:0000974,4.63e-11,23;UBERON:0004807,4.63e-11,23;UBERON:0005058,4.63e-11,23;UBERON:0003351,4.63e-11,23;UBERON:0009113,4.63e-11,23;UBERON:0003295,4.63e-11,23;UBERON:0009722,4.63e-11,23;UBERON:0005562,4.63e-11,23;UBERON:0007690,4.63e-11,23;UBERON:0006562,2.01e-10,24;UBERON:0003408,2.01e-10,24;UBERON:0001557,2.01e-10,24;UBERON:0001042,2.01e-10,24;UBERON:0008814,2.01e-10,24;UBERON:0009145,2.01e-10,24;UBERON:0000072,8.42e-09,27;UBERON:0000490,2.53e-08,66;UBERON:0003081,3.34e-08,87;UBERON:0003929,4.59e-08,55;UBERON:0001041,1.61e-07,80|phase1_expression=0,1.04692622291808,0.909998478779072,0,0,0.671517087647559,0.934450562382103,55.2647824329946,1.54867594366833,3.04283884218592,2.05461561870606,1.27635454392538,20.7152883216759,38.6398178691969,2.99798785634096,3.23960427823721,1.39912375625629,15.930839350591,17.4135330679288,11.4585205985468,0.425216450755349,1.88652807281682,1.82839852397255,0.47997726838022,1.37645568640302,2.29692785646008,1.29228598847722,2.80112602491656,0,0,2.66076612786366,14.6057054895715,14.1464901144451,0,0,0,0,14.6486070757918,7.0320181007142,13.6116173433188,11.7646297606203,6.14740936462601,19.4204141212461,0,0,0,0.782391344348039,0,0,0,0,0,10.7380867876951,9.42970784614748,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,6.99132285847364,0,0,0,0,0,0.23517741427141,0.251333182659351,0,0.433798070759735,2.65383165584962,0.647067399789637,2.20841518460394,0.484875253135222,0,0,0,0.255457055208591,2.03685711660064,0.599902730993408,2.1601938602421,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,1.40442637462647,1.02939162845886,2.27330799516474,0.414251545071004,0.469052119962192,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.243206428637567,0.438599962275997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0.31399745568275,0.123397163921801,0,1.83529616287703,2.75182593158484,2.69834534861824,1.62288097110802,2.17059443777175,1.78238096246994,1.15078454980324,1.78348749452539,0.823684239564244,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0.189491411770485,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.81931657357869,1.55416483679306,0.578596234326046,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,1.58018378967908,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0,0.164140899745061,0.582961673259701,0,4.95525554313773,0.619160603889667,1.48155621895769,3.20226376907975,4.92099219795691,4.80434163733698,5.43930975980337,4.89830083132803,4.56059913554598,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.897099276263873,0.330916980914195,0,0,0.168956125490778,0,0,0.104859344425711,0,0,1.89606672376907,0,0.102710957164827,0.129920822977795,0.179026695667481,1.19208812868759,1.80293174279953,2.51072196196781,1.9183625490148,2.43861781295999,2.41982844328417,2.92373642219257,2.98256709085021,4.20756847853648,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.771626443924566,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p3@Tspan32}} | ||
|EntrezGene=27027 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000141186_5end | |||
|description=CAGE_peak_3_at_Tspan32_5end | |||
|id=chr7:150190963..150191010,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.96e-12!32;CL:0002032!9.96e-12!32;CL:0000037!9.96e-12!32;CL:0000566!9.96e-12!32;CL:0000837!9.96e-12!32;CL:0002031!9.40e-10!25;CL:0000838!6.47e-09!12;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000542!8.18e-08!13;CL:0000051!8.18e-08!13;CL:0000791!3.24e-07!9;CL:0000789!3.24e-07!9;CL:0002420!3.24e-07!9;CL:0002419!3.24e-07!9;CL:0000790!3.24e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.04e-21,32;CL:0002032,2.04e-21,32;CL:0000037,2.04e-21,32;CL:0000837,2.04e-21,32;CL:0002031,6.94e-19,25;CL:0000838,7.66e-15,12;CL:0000084,1.71e-13,11;CL:0000827,1.71e-13,11;CL:0000542,1.91e-13,13;CL:0000051,1.91e-13,13;CL:0002320,1.25e-12,46;CL:0000134,1.25e-12,46;CL:0000791,8.80e-12,9;CL:0000789,8.80e-12,9;CL:0002420,8.80e-12,9;CL:0002419,8.80e-12,9;CL:0000790,8.80e-12,9;CL:0000624,8.67e-11,8;CL:0000050,4.18e-10,9;CL:0000219,1.02e-09,54;CL:0000049,1.22e-09,19;CL:0000738,1.58e-09,17;CL:0002087,1.58e-09,17;CL:0000553,8.44e-09,6;CL:0000556,8.44e-09,6;CL:0000763,1.23e-08,16;CL:0000893,5.71e-08,6;CL:0002489,5.71e-08,6;CL:0000898,5.71e-08,6;CL:0000809,5.71e-08,6;CL:0000810,5.71e-08,6;CL:0000895,5.71e-08,6;CL:0000808,5.71e-08,6;CL:0000894,5.71e-08,6;CL:0000806,5.71e-08,6;CL:0000807,5.71e-08,6;CL:0000805,5.71e-08,6;CL:0002425,5.71e-08,6;CL:0002436,5.71e-08,6;CL:0002427,5.71e-08,6;CL:0002428,5.71e-08,6;CL:0002429,5.71e-08,6;CL:0002433,5.71e-08,6;CL:0002431,5.71e-08,6;CL:0002432,5.71e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.71e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.88e-12!48;UBERON:0002405!2.17e-11!70;UBERON:0002390!8.47e-11!45;UBERON:0003061!8.47e-11!45;UBERON:0004177!3.77e-10!29;UBERON:0005057!9.31e-09!51;UBERON:0002370!5.76e-07!23;UBERON:0000974!5.76e-07!23;UBERON:0004807!5.76e-07!23;UBERON:0005058!5.76e-07!23;UBERON:0003351!5.76e-07!23;UBERON:0009113!5.76e-07!23;UBERON:0003295!5.76e-07!23;UBERON:0009722!5.76e-07!23;UBERON:0005562!5.76e-07!23;UBERON:0007690!5.76e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.06e-21,48;UBERON:0002405,7.06e-21,48;UBERON:0002390,1.36e-19,45;UBERON:0003061,1.36e-19,45;UBERON:0004177,2.03e-15,29;UBERON:0005057,2.03e-15,29;UBERON:0002384,1.25e-12,46;UBERON:0000077,9.44e-12,35;UBERON:0002370,4.63e-11,23;UBERON:0000974,4.63e-11,23;UBERON:0004807,4.63e-11,23;UBERON:0005058,4.63e-11,23;UBERON:0003351,4.63e-11,23;UBERON:0009113,4.63e-11,23;UBERON:0003295,4.63e-11,23;UBERON:0009722,4.63e-11,23;UBERON:0005562,4.63e-11,23;UBERON:0007690,4.63e-11,23;UBERON:0006562,2.01e-10,24;UBERON:0003408,2.01e-10,24;UBERON:0001557,2.01e-10,24;UBERON:0001042,2.01e-10,24;UBERON:0008814,2.01e-10,24;UBERON:0009145,2.01e-10,24;UBERON:0000072,8.42e-09,27;UBERON:0000490,2.53e-08,66;UBERON:0003081,3.34e-08,87;UBERON:0003929,4.59e-08,55;UBERON:0001041,1.61e-07,80 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,0,0,0.671517087647559,0.934450562382103,55.2647824329946,1.54867594366833,3.04283884218592,2.05461561870606,1.27635454392538,20.7152883216759,38.6398178691969,2.99798785634096,3.23960427823721,1.39912375625629,15.930839350591,17.4135330679288,11.4585205985468,0.425216450755349,1.88652807281682,1.82839852397255,0.47997726838022,1.37645568640302,2.29692785646008,1.29228598847722,2.80112602491656,0,0,2.66076612786366,14.6057054895715,14.1464901144451,0,0,0,0,14.6486070757918,7.0320181007142,13.6116173433188,11.7646297606203,6.14740936462601,19.4204141212461,0,0,0,0.782391344348039,0,0,0,0,0,10.7380867876951,9.42970784614748,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,6.99132285847364,0,0,0,0,0,0.23517741427141,0.251333182659351,0,0.433798070759735,2.65383165584962,0.647067399789637,2.20841518460394,0.484875253135222,0,0,0,0.255457055208591,2.03685711660064,0.599902730993408,2.1601938602421,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,1.40442637462647,1.02939162845886,2.27330799516474,0.414251545071004,0.469052119962192,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.32833492815819,0.243206428637567,0.438599962275997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0.31399745568275,0.123397163921801,0,1.83529616287703,2.75182593158484,2.69834534861824,1.62288097110802,2.17059443777175,1.78238096246994,1.15078454980324,1.78348749452539,0.823684239564244,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0.189491411770485,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.81931657357869,1.55416483679306,0.578596234326046,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,1.58018378967908,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0,0.164140899745061,0.582961673259701,0,4.95525554313773,0.619160603889667,1.48155621895769,3.20226376907975,4.92099219795691,4.80434163733698,5.43930975980337,4.89830083132803,4.56059913554598,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.897099276263873,0.330916980914195,0,0,0.168956125490778,0,0,0.104859344425711,0,0,1.89606672376907,0,0.102710957164827,0.129920822977795,0.179026695667481,1.19208812868759,1.80293174279953,2.51072196196781,1.9183625490148,2.43861781295999,2.41982844328417,2.92373642219257,2.98256709085021,4.20756847853648,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.771626443924566,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Tspan32 | |||
}} |
Revision as of 12:27, 14 September 2013
Short description: | p3@Tspan32 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tspan32_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000141186_5end |
EntrezGene: | Tspan32 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.06e-21 | 48 |
immune system | 7.06e-21 | 48 |
hematopoietic system | 1.36e-19 | 45 |
blood island | 1.36e-19 | 45 |
hemopoietic organ | 2.03e-15 | 29 |
immune organ | 2.03e-15 | 29 |
connective tissue | 1.25e-12 | 46 |
mixed endoderm/mesoderm-derived structure | 9.44e-12 | 35 |
thymus | 4.63e-11 | 23 |
neck | 4.63e-11 | 23 |
respiratory system epithelium | 4.63e-11 | 23 |
hemolymphoid system gland | 4.63e-11 | 23 |
pharyngeal epithelium | 4.63e-11 | 23 |
thymic region | 4.63e-11 | 23 |
pharyngeal gland | 4.63e-11 | 23 |
entire pharyngeal arch endoderm | 4.63e-11 | 23 |
thymus primordium | 4.63e-11 | 23 |
early pharyngeal endoderm | 4.63e-11 | 23 |
pharynx | 2.01e-10 | 24 |
gland of gut | 2.01e-10 | 24 |
upper respiratory tract | 2.01e-10 | 24 |
chordate pharynx | 2.01e-10 | 24 |
pharyngeal arch system | 2.01e-10 | 24 |
pharyngeal region of foregut | 2.01e-10 | 24 |
segment of respiratory tract | 8.42e-09 | 27 |
unilaminar epithelium | 2.53e-08 | 66 |
lateral plate mesoderm | 3.34e-08 | 87 |
gut epithelium | 4.59e-08 | 55 |
foregut | 1.61e-07 | 80 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.71e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.