FFCP PHASE1:Mm9::chr7:25155274..25155331,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16534|HGNC=|MCL_coexpression_id=3615|UniProt=O89109|association_with_transcript=0bp_to_ENSMUST00000067352,ENSMUST00000171904,NM_001163510,NM_008433,uc009fpk.2,uc009fpl.2_5end|description=CAGE_peak_1_at_Kcnn4_5end|id=chr7:25155274..25155331,+|ontology_enrichment_celltype=CL:0000988!1.21e-15!32;CL:0002032!1.21e-15!32;CL:0000037!1.21e-15!32;CL:0000566!1.21e-15!32;CL:0000837!1.21e-15!32;CL:0002031!6.71e-13!25;CL:0002320!3.56e-12!46;CL:0000134!3.56e-12!46;CL:0000063!2.94e-11!66;CL:0000049!2.45e-10!19;CL:0000219!5.52e-09!54;CL:0000763!1.44e-08!16;CL:0000738!5.67e-08!17;CL:0002087!5.67e-08!17;CL:0000084!1.55e-07!11;CL:0000827!1.55e-07!11;CL:0000838!2.79e-07!12;CL:0000839!5.94e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,3.71e-16,32;CL:0002032,3.71e-16,32;CL:0000037,3.71e-16,32;CL:0000837,3.71e-16,32;CL:0002031,1.50e-13,25;CL:0002320,5.15e-13,46;CL:0000134,5.15e-13,46;CL:0000049,7.67e-11,19;CL:0000219,3.63e-10,54;CL:0000763,5.69e-09,16;CL:0000738,4.51e-08,17;CL:0002087,4.51e-08,17;CL:0000084,7.03e-08,11;CL:0000827,7.03e-08,11;CL:0000838,1.31e-07,12;CL:0000839,2.90e-07,13;CL:0000791,5.24e-07,9;CL:0000789,5.24e-07,9;CL:0002420,5.24e-07,9;CL:0002419,5.24e-07,9;CL:0000790,5.24e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.49e-18!48;UBERON:0002390!8.13e-18!45;UBERON:0003061!8.13e-18!45;UBERON:0002405!2.75e-16!70;UBERON:0002384!3.56e-12!46;UBERON:0004177!5.07e-10!29;UBERON:0001474!1.24e-09!22;UBERON:0004765!1.24e-09!22;UBERON:0001434!1.24e-09!22;UBERON:0004119!2.68e-09!130;UBERON:0000925!2.68e-09!130;UBERON:0006595!2.68e-09!130;UBERON:0001007!3.54e-09!128;UBERON:0001555!3.54e-09!128;UBERON:0007026!3.54e-09!128;UBERON:0002371!8.52e-09!16;UBERON:0004921!1.11e-08!126;UBERON:0004185!1.11e-08!126;UBERON:0005057!2.11e-08!51;UBERON:0003408!1.04e-07!24;UBERON:0000072!1.47e-07!27;UBERON:0006562!2.41e-07!24;UBERON:0001557!2.41e-07!24;UBERON:0001042!2.41e-07!24;UBERON:0008814!2.41e-07!24;UBERON:0009145!2.41e-07!24;UBERON:0002370!3.41e-07!23;UBERON:0000974!3.41e-07!23;UBERON:0004807!3.41e-07!23;UBERON:0005058!3.41e-07!23;UBERON:0003351!3.41e-07!23;UBERON:0009113!3.41e-07!23;UBERON:0003295!3.41e-07!23;UBERON:0009722!3.41e-07!23;UBERON:0005562!3.41e-07!23;UBERON:0007690!3.41e-07!23;UBERON:0003929!8.55e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.12e-20,48;UBERON:0002405,3.12e-20,48;UBERON:0002390,1.86e-19,45;UBERON:0003061,1.86e-19,45;UBERON:0002384,5.15e-13,46;UBERON:0004177,3.91e-11,29;UBERON:0005057,3.91e-11,29;UBERON:0000077,1.44e-10,35;UBERON:0001474,4.26e-10,22;UBERON:0004765,4.26e-10,22;UBERON:0001434,4.26e-10,22;UBERON:0004119,1.35e-09,118;UBERON:0000925,1.35e-09,118;UBERON:0006595,1.35e-09,118;UBERON:0001007,1.76e-09,116;UBERON:0001555,1.76e-09,116;UBERON:0007026,1.76e-09,116;UBERON:0002371,3.27e-09,16;UBERON:0004921,5.86e-09,114;UBERON:0003408,1.19e-08,24;UBERON:0000072,1.87e-08,27;UBERON:0006562,2.98e-08,24;UBERON:0001557,2.98e-08,24;UBERON:0001042,2.98e-08,24;UBERON:0008814,2.98e-08,24;UBERON:0009145,2.98e-08,24;UBERON:0002370,4.27e-08,23;UBERON:0000974,4.27e-08,23;UBERON:0004807,4.27e-08,23;UBERON:0005058,4.27e-08,23;UBERON:0003351,4.27e-08,23;UBERON:0009113,4.27e-08,23;UBERON:0003295,4.27e-08,23;UBERON:0009722,4.27e-08,23;UBERON:0005562,4.27e-08,23;UBERON:0007690,4.27e-08,23;UBERON:0003929,2.09e-07,55;UBERON:0001041,5.94e-07,80|phase1_expression=1.76163731815273,1.39590163055744,0,2.11724947914781,2.00358291978539,17.4594442788365,17.9881733258555,53.0696859344878,89.6824160106117,102.286198002711,59.7550709107012,25.367546560517,84.915562045878,60.3200776691082,85.942318548441,120.877734631726,118.225957403657,11.1989068702174,13.1629856261509,14.004858509335,1.9559956734746,38.7234709683453,29.7767759618386,12.6394014006791,11.4704640533585,2.8711598205751,8.18447792702242,8.83432054012145,17.4821545899864,19.4063199915147,19.0688239163562,40.0069324279568,44.284664706089,31.6963362030877,31.7736781726402,33.2469290716985,38.5880083335878,4.18531630736908,0.7813353445238,1.0470474879476,1.17646297606203,2.04913645487534,2.91306211818692,0,0,0,0,0,0.219686182734472,0,1.53985063787899,0,3.35565212115473,74.7123006271685,64.1939156362106,0,0,0,0,0,0,2.37191172448392,1.77858959222228,48.5945847331955,44.4989863155138,61.1012898853646,29.0612107202853,12.2949857702897,0,0,0,0.285650984403804,0.883474163806454,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0.931997229126503,10.6016670666458,18.8928900266964,3.18850937571846,0.860423876981386,0,0,0,0,14.0444420131752,4.77204903218562,7.01422212427746,4.59341446863442,4.3661460130771,0,0,0,3.68034769719064,5.57391704045217,6.0662933401774,7.53613606145796,6.73238497482646,1.03909497345377,5.37804512975021,4.87144765299426,3.22861696158482,1.95939432718409,1.41106448562846,0.251333182659351,0.247194967734374,1.44599356919912,25.6537060065464,8.57364304721269,24.7342500675641,25.2135131630315,9.31958806090611,0,0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| ||
|EntrezGene=16534 | |||
|HGNC= | |||
|MCL_coexpression_id=3615 | |||
|UniProt=O89109 | |||
|association_with_transcript=0bp_to_ENSMUST00000067352,ENSMUST00000171904,NM_001163510,NM_008433,uc009fpk.2,uc009fpl.2_5end | |||
|description=CAGE_peak_1_at_Kcnn4_5end | |||
|id=chr7:25155274..25155331,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.21e-15!32;CL:0002032!1.21e-15!32;CL:0000037!1.21e-15!32;CL:0000566!1.21e-15!32;CL:0000837!1.21e-15!32;CL:0002031!6.71e-13!25;CL:0002320!3.56e-12!46;CL:0000134!3.56e-12!46;CL:0000063!2.94e-11!66;CL:0000049!2.45e-10!19;CL:0000219!5.52e-09!54;CL:0000763!1.44e-08!16;CL:0000738!5.67e-08!17;CL:0002087!5.67e-08!17;CL:0000084!1.55e-07!11;CL:0000827!1.55e-07!11;CL:0000838!2.79e-07!12;CL:0000839!5.94e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.71e-16,32;CL:0002032,3.71e-16,32;CL:0000037,3.71e-16,32;CL:0000837,3.71e-16,32;CL:0002031,1.50e-13,25;CL:0002320,5.15e-13,46;CL:0000134,5.15e-13,46;CL:0000049,7.67e-11,19;CL:0000219,3.63e-10,54;CL:0000763,5.69e-09,16;CL:0000738,4.51e-08,17;CL:0002087,4.51e-08,17;CL:0000084,7.03e-08,11;CL:0000827,7.03e-08,11;CL:0000838,1.31e-07,12;CL:0000839,2.90e-07,13;CL:0000791,5.24e-07,9;CL:0000789,5.24e-07,9;CL:0002420,5.24e-07,9;CL:0002419,5.24e-07,9;CL:0000790,5.24e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.49e-18!48;UBERON:0002390!8.13e-18!45;UBERON:0003061!8.13e-18!45;UBERON:0002405!2.75e-16!70;UBERON:0002384!3.56e-12!46;UBERON:0004177!5.07e-10!29;UBERON:0001474!1.24e-09!22;UBERON:0004765!1.24e-09!22;UBERON:0001434!1.24e-09!22;UBERON:0004119!2.68e-09!130;UBERON:0000925!2.68e-09!130;UBERON:0006595!2.68e-09!130;UBERON:0001007!3.54e-09!128;UBERON:0001555!3.54e-09!128;UBERON:0007026!3.54e-09!128;UBERON:0002371!8.52e-09!16;UBERON:0004921!1.11e-08!126;UBERON:0004185!1.11e-08!126;UBERON:0005057!2.11e-08!51;UBERON:0003408!1.04e-07!24;UBERON:0000072!1.47e-07!27;UBERON:0006562!2.41e-07!24;UBERON:0001557!2.41e-07!24;UBERON:0001042!2.41e-07!24;UBERON:0008814!2.41e-07!24;UBERON:0009145!2.41e-07!24;UBERON:0002370!3.41e-07!23;UBERON:0000974!3.41e-07!23;UBERON:0004807!3.41e-07!23;UBERON:0005058!3.41e-07!23;UBERON:0003351!3.41e-07!23;UBERON:0009113!3.41e-07!23;UBERON:0003295!3.41e-07!23;UBERON:0009722!3.41e-07!23;UBERON:0005562!3.41e-07!23;UBERON:0007690!3.41e-07!23;UBERON:0003929!8.55e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.12e-20,48;UBERON:0002405,3.12e-20,48;UBERON:0002390,1.86e-19,45;UBERON:0003061,1.86e-19,45;UBERON:0002384,5.15e-13,46;UBERON:0004177,3.91e-11,29;UBERON:0005057,3.91e-11,29;UBERON:0000077,1.44e-10,35;UBERON:0001474,4.26e-10,22;UBERON:0004765,4.26e-10,22;UBERON:0001434,4.26e-10,22;UBERON:0004119,1.35e-09,118;UBERON:0000925,1.35e-09,118;UBERON:0006595,1.35e-09,118;UBERON:0001007,1.76e-09,116;UBERON:0001555,1.76e-09,116;UBERON:0007026,1.76e-09,116;UBERON:0002371,3.27e-09,16;UBERON:0004921,5.86e-09,114;UBERON:0003408,1.19e-08,24;UBERON:0000072,1.87e-08,27;UBERON:0006562,2.98e-08,24;UBERON:0001557,2.98e-08,24;UBERON:0001042,2.98e-08,24;UBERON:0008814,2.98e-08,24;UBERON:0009145,2.98e-08,24;UBERON:0002370,4.27e-08,23;UBERON:0000974,4.27e-08,23;UBERON:0004807,4.27e-08,23;UBERON:0005058,4.27e-08,23;UBERON:0003351,4.27e-08,23;UBERON:0009113,4.27e-08,23;UBERON:0003295,4.27e-08,23;UBERON:0009722,4.27e-08,23;UBERON:0005562,4.27e-08,23;UBERON:0007690,4.27e-08,23;UBERON:0003929,2.09e-07,55;UBERON:0001041,5.94e-07,80 | |||
|phase1_expression=1.76163731815273,1.39590163055744,0,2.11724947914781,2.00358291978539,17.4594442788365,17.9881733258555,53.0696859344878,89.6824160106117,102.286198002711,59.7550709107012,25.367546560517,84.915562045878,60.3200776691082,85.942318548441,120.877734631726,118.225957403657,11.1989068702174,13.1629856261509,14.004858509335,1.9559956734746,38.7234709683453,29.7767759618386,12.6394014006791,11.4704640533585,2.8711598205751,8.18447792702242,8.83432054012145,17.4821545899864,19.4063199915147,19.0688239163562,40.0069324279568,44.284664706089,31.6963362030877,31.7736781726402,33.2469290716985,38.5880083335878,4.18531630736908,0.7813353445238,1.0470474879476,1.17646297606203,2.04913645487534,2.91306211818692,0,0,0,0,0,0.219686182734472,0,1.53985063787899,0,3.35565212115473,74.7123006271685,64.1939156362106,0,0,0,0,0,0,2.37191172448392,1.77858959222228,48.5945847331955,44.4989863155138,61.1012898853646,29.0612107202853,12.2949857702897,0,0,0,0.285650984403804,0.883474163806454,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.883885756421003,0.142371680799103,0.931997229126503,10.6016670666458,18.8928900266964,3.18850937571846,0.860423876981386,0,0,0,0,14.0444420131752,4.77204903218562,7.01422212427746,4.59341446863442,4.3661460130771,0,0,0,3.68034769719064,5.57391704045217,6.0662933401774,7.53613606145796,6.73238497482646,1.03909497345377,5.37804512975021,4.87144765299426,3.22861696158482,1.95939432718409,1.41106448562846,0.251333182659351,0.247194967734374,1.44599356919912,25.6537060065464,8.57364304721269,24.7342500675641,25.2135131630315,9.31958806090611,0,0.209446706813455,10.7291963187608,83.1516964071087,40.1934829765583,88.5679482699261,0,0,0.125654352112864,0,0,0,0,1.83310854930569,15.6752782968717,0.505445516867349,17.2562321826909,0.390361328888111,0.689706313300419,0,1.80845781402858,0.340182495756639,0.512454881139399,1.3118241438362,10.6068382002996,0.862271971731369,0,0,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.59710280045548,64.6036132328176,39.6315776956661,57.9693538767009,1.65700618028402,2.81431271977315,0.900310307305074,0.473489471170421,0.590292695242212,0.462801338662135,0,0,1.05088808130453,0.329119699826961,0.492502392237286,0.162137619091711,0.730999937126662,0.658650345873152,0.402619256281115,0.210289948564127,0,0.991256348951394,8.72686869989696,0.639864751605702,3.0190767341857,0.902072229254653,1.00841762311671,0,1.14135375667535,6.16887780007865,0.823494773620054,3.01602250560323,5.17286827306992,3.70431765526328,8.98819408654222,9.94235029423593,8.16479220342906,0.758671603812327,1.48523066392647,1.1270773567308,1.01825663922657,0.193952487167626,1.61312385747733,0.379419222745544,0.295220295959204,0.156998727841375,0,0.296452627087149,47.3840100233707,55.0365186316968,55.0912175342892,58.4237149598888,56.676632541818,46.8511567277812,25.6049562331221,15.7271169971784,21.4157902286704,4.31304619582064,4.46569137202204,1.5601883655728,0.757736633841335,0.538192240565737,0.482443521363367,3.69506380333209,1.89491411770485,0.651859905768103,0.339490171550376,0.234690248288502,0.837531287209079,0,0.780534591431195,1.10344600874334,1.7717175171902,1.11618338060241,2.29408640602033,2.93564469172023,0.867894351489069,36.1899081454253,31.0026239776664,18.6870423747234,24.2824336748165,0,0.234423373184406,1.47541450839008,1.00988370881749,0.315508219416257,0,0,0.238968797952552,0.668396022247182,1.13230612315533,0.404810701674894,1.16902343164525,0.790575555893047,0.321321316421807,2.6968616189571,2.31485284767432,1.79175655288934,4.28922319728592,2.65490276679926,1.45668381692989,0.906970670894253,0.188605079755898,1.18120757152309,1.53717573971964,1.80899805217755,2.90826983582004,2.13898427030833,1.58018378967908,2.10837217149998,2.06271086496374,0,0.36012218806262,0,0.214337035031592,0.354680467284547,1.24858172321449,1.15184314421485,1.2178597964584,3.52007562095566,3.1774810629573,2.42581237860458,0.32977250588296,0.322928853391811,0.301564624640779,0.238744688006273,0.656563598980245,7.28702091574627,0,61.1717753256313,8.46186158649212,23.149315921214,89.6633855342329,79.0092636227525,69.5485646547829,101.647101136325,73.6144639222441,123.827176528764,7.63736494412091,1.42351197111511,1.42323626988794,1.94409613479242,2.50905955217362,2.40198820120795,3.9110660451598,5.62043498932284,10.4702376793612,6.22151871800606,58.405895430171,0,0.299033092087958,1.15820943319968,0.583353565032143,0.387479470433193,0.844780627453891,0.938857909166032,0.781226309063701,0.104859344425711,0,0,41.7134679229195,17.231643299664,22.0828557904379,26.5038478874702,24.7056840021124,20.0668168329078,32.9335531684715,30.8671111794866,27.8667401856887,29.3396205621749,32.3652054289258,39.4704416995997,43.6801761047096,44.2963459268146,7.02864189207155,0.221985953374065,0,0.167884616364078,8.50034213741638,3.94133198447482,7.69236821922513,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,3.19219898720825,8.53668028770671,10.93980226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| |||
|short_description=p1@Kcnn4 | |||
}} |
Revision as of 12:46, 14 September 2013
Short description: | p1@Kcnn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3615 |
Association with transcript: | 0bp_to_ENSMUST00000067352, ENSMUST00000171904, NM_001163510, NM_008433, uc009fpk.2, uc009fpl.2_5end |
EntrezGene: | Kcnn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.71e-16 | 32 |
hematopoietic oligopotent progenitor cell | 3.71e-16 | 32 |
hematopoietic stem cell | 3.71e-16 | 32 |
hematopoietic multipotent progenitor cell | 3.71e-16 | 32 |
hematopoietic lineage restricted progenitor cell | 1.50e-13 | 25 |
connective tissue cell | 5.15e-13 | 46 |
mesenchymal cell | 5.15e-13 | 46 |
common myeloid progenitor | 7.67e-11 | 19 |
motile cell | 3.63e-10 | 54 |
myeloid cell | 5.69e-09 | 16 |
leukocyte | 4.51e-08 | 17 |
nongranular leukocyte | 4.51e-08 | 17 |
T cell | 7.03e-08 | 11 |
pro-T cell | 7.03e-08 | 11 |
lymphoid lineage restricted progenitor cell | 1.31e-07 | 12 |
myeloid lineage restricted progenitor cell | 2.90e-07 | 13 |
mature alpha-beta T cell | 5.24e-07 | 9 |
alpha-beta T cell | 5.24e-07 | 9 |
immature T cell | 5.24e-07 | 9 |
mature T cell | 5.24e-07 | 9 |
immature alpha-beta T cell | 5.24e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.