FFCP PHASE1:Mm9::chr7:25292141..25292158,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232969|HGNC=|MCL_coexpression_id=176|UniProt=E9PZE0|association_with_transcript=0bp_to_ENSMUST00000085998_5end|description=CAGE_peak_2_at_Zfp428_5end|id=chr7:25292141..25292158,+|ontology_enrichment_celltype=CL:0000221!4.79e-23!44;CL:0000133!4.79e-23!44;CL:0002319!7.57e-23!43;CL:0000055!7.74e-21!50;CL:0000540!4.00e-18!33;CL:0000047!4.00e-18!33;CL:0000031!4.00e-18!33;CL:0000404!4.00e-18!33;CL:0000393!1.52e-16!39;CL:0000211!1.52e-16!39;CL:0000117!1.70e-14!23;CL:0000337!1.70e-14!23;CL:0002321!1.67e-13!70;CL:0000220!1.67e-13!70;CL:0002453!9.05e-07!8|ontology_enrichment_celltype_v019_2=CL:0000221,1.17e-23,44;CL:0000133,1.17e-23,44;CL:0002319,1.87e-23,43;CL:0000540,1.35e-18,33;CL:0000047,1.35e-18,33;CL:0000031,1.35e-18,33;CL:0000404,1.35e-18,33;CL:0000393,1.10e-16,39;CL:0000211,1.10e-16,39;CL:0000117,7.28e-15,23;CL:0000337,7.28e-15,23;CL:0002321,2.59e-14,70;CL:0002453,6.42e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.78e-31!73;UBERON:0005743!1.78e-31!73;UBERON:0000073!9.68e-31!75;UBERON:0001016!9.68e-31!75;UBERON:0004121!5.18e-24!102;UBERON:0000924!5.18e-24!102;UBERON:0006601!5.18e-24!102;UBERON:0001049!8.47e-20!52;UBERON:0005068!8.47e-20!52;UBERON:0006241!8.47e-20!52;UBERON:0007135!8.47e-20!52;UBERON:0002346!1.35e-19!71;UBERON:0003075!1.35e-19!71;UBERON:0007284!1.35e-19!71;UBERON:0000955!1.17e-18!50;UBERON:0006238!1.17e-18!50;UBERON:0002616!1.85e-18!49;UBERON:0000033!3.14e-18!63;UBERON:0003056!2.97e-16!49;UBERON:0002020!3.79e-16!34;UBERON:0003080!1.04e-15!40;UBERON:0002780!3.11e-15!39;UBERON:0001890!3.11e-15!39;UBERON:0006240!3.11e-15!39;UBERON:0002791!2.03e-13!29;UBERON:0003528!2.03e-13!29;UBERON:0001893!2.03e-13!29;UBERON:0000956!2.41e-09!21;UBERON:0001869!2.41e-09!21;UBERON:0000203!2.41e-09!21;UBERON:0000153!3.55e-08!94;UBERON:0007811!1.02e-07!86;UBERON:0002619!1.31e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-32,73;UBERON:0001016,1.42e-31,75;UBERON:0004121,2.49e-26,95;UBERON:0000924,2.49e-26,95;UBERON:0006601,2.49e-26,95;UBERON:0002346,1.56e-22,64;UBERON:0003075,1.56e-22,64;UBERON:0007284,1.56e-22,64;UBERON:0000073,6.72e-22,54;UBERON:0010314,5.72e-21,92;UBERON:0001049,2.57e-20,52;UBERON:0005068,2.57e-20,52;UBERON:0006241,2.57e-20,52;UBERON:0007135,2.57e-20,52;UBERON:0010371,4.81e-19,73;UBERON:0000955,2.08e-17,47;UBERON:0006238,2.08e-17,47;UBERON:0002616,3.31e-17,46;UBERON:0003056,1.14e-16,49;UBERON:0002020,1.46e-16,34;UBERON:0003080,4.12e-16,40;UBERON:0002780,1.27e-15,39;UBERON:0001890,1.27e-15,39;UBERON:0006240,1.27e-15,39;UBERON:0003528,9.35e-14,29;UBERON:0002791,9.35e-14,29;UBERON:0001893,9.35e-14,29;UBERON:0000956,1.45e-09,21;UBERON:0001869,1.45e-09,21;UBERON:0000203,1.45e-09,21;UBERON:0002619,8.84e-08,17|phase1_expression=4.64431656603902,1.74487703819681,0,0.30246421130683,0,2.51818907867835,4.20502753071946,0.129123323441576,0.140788722151667,0.468129052643987,0.68487187290202,0.478632953972018,0,0,0,0.607425802169478,0,0,0,0,1.36069264241712,0.297872853602656,0,1.27993938234725,2.2940928106717,1.72269589234506,0.430761996159075,2.37018355954478,0,0.756090389279792,1.33038306393183,3.17515336729816,2.46025915033828,15.8481681015439,1.73310971850765,2.32728503501889,3.47087905646027,0,0,0,0,0,0,3.14742044938943,3.64956952390252,3.85448179539531,21.9069576417451,132.123244766551,56.0199765972903,48.9963345667194,31.9169041305827,106.376897630079,0.167782606057736,0,0,1.80081605225163,0.85960031981627,4.64104883049698,27.5150386769053,37.5583595283143,34.2268957893337,13.5537812827653,5.33576877666684,0,1.97773272513395,1.4209602298922,67.7096249771595,137.934371610438,33.6991240002552,49.4121734293988,47.5334412654123,14.2825492201902,11.0434270475807,50.2212276781312,34.887751450638,58.8300023430413,30.8324466798288,9.95961237064464,12.4421291937557,21.101806036831,13.3571959659518,15.6274011167028,13.1216009530649,11.2552522006336,9.16789486660861,19.1508580557884,8.82704420954438,16.2167517868012,3.02904773332736,1.28471652181535,1.44932244350839,1.72084775396277,1.3599426674155,0.539703191637817,0,0,1.26399978118577,1.36344258062446,1.29893002301434,1.7666978725517,5.49289337129054,6.41632387071589,2.54805239706646,0,4.97929394325792,2.53359865475099,3.53867111510348,0.91347103775248,0.517875767294343,0.445326417194474,6.24547176358089,4.26251669636998,1.84492397804847,1.05505848386836,0.940709657085638,0.879666139307728,0.741584903203122,0,0,2.42650274921114,1.76673214768315,0.484875253135222,0,3.80615036115011,3.14170060220183,0.510914110417183,0,0.599902730993408,0.254140454146129,9.43681028250383,7.32000964509802,17.2146462394624,3.47648640384553,3.3243009452943,9.3504620051802,4.38051410282946,2.85150218780886,1.11966273549084,0.252722758433675,1.68353484709179,5.98554037628437,8.27647575960503,4.86167750474443,3.91832526372859,2.31324097114515,4.09963904911519,4.02917415606834,4.9153640440413,10.7783996466421,3.9712276835242,5.45448484908241,5.69908904311695,5.00485048606076,1.0447564995665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| ||
|EntrezGene=232969 | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=E9PZE0 | |||
|association_with_transcript=0bp_to_ENSMUST00000085998_5end | |||
|description=CAGE_peak_2_at_Zfp428_5end | |||
|id=chr7:25292141..25292158,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.79e-23!44;CL:0000133!4.79e-23!44;CL:0002319!7.57e-23!43;CL:0000055!7.74e-21!50;CL:0000540!4.00e-18!33;CL:0000047!4.00e-18!33;CL:0000031!4.00e-18!33;CL:0000404!4.00e-18!33;CL:0000393!1.52e-16!39;CL:0000211!1.52e-16!39;CL:0000117!1.70e-14!23;CL:0000337!1.70e-14!23;CL:0002321!1.67e-13!70;CL:0000220!1.67e-13!70;CL:0002453!9.05e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.17e-23,44;CL:0000133,1.17e-23,44;CL:0002319,1.87e-23,43;CL:0000540,1.35e-18,33;CL:0000047,1.35e-18,33;CL:0000031,1.35e-18,33;CL:0000404,1.35e-18,33;CL:0000393,1.10e-16,39;CL:0000211,1.10e-16,39;CL:0000117,7.28e-15,23;CL:0000337,7.28e-15,23;CL:0002321,2.59e-14,70;CL:0002453,6.42e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-31!73;UBERON:0005743!1.78e-31!73;UBERON:0000073!9.68e-31!75;UBERON:0001016!9.68e-31!75;UBERON:0004121!5.18e-24!102;UBERON:0000924!5.18e-24!102;UBERON:0006601!5.18e-24!102;UBERON:0001049!8.47e-20!52;UBERON:0005068!8.47e-20!52;UBERON:0006241!8.47e-20!52;UBERON:0007135!8.47e-20!52;UBERON:0002346!1.35e-19!71;UBERON:0003075!1.35e-19!71;UBERON:0007284!1.35e-19!71;UBERON:0000955!1.17e-18!50;UBERON:0006238!1.17e-18!50;UBERON:0002616!1.85e-18!49;UBERON:0000033!3.14e-18!63;UBERON:0003056!2.97e-16!49;UBERON:0002020!3.79e-16!34;UBERON:0003080!1.04e-15!40;UBERON:0002780!3.11e-15!39;UBERON:0001890!3.11e-15!39;UBERON:0006240!3.11e-15!39;UBERON:0002791!2.03e-13!29;UBERON:0003528!2.03e-13!29;UBERON:0001893!2.03e-13!29;UBERON:0000956!2.41e-09!21;UBERON:0001869!2.41e-09!21;UBERON:0000203!2.41e-09!21;UBERON:0000153!3.55e-08!94;UBERON:0007811!1.02e-07!86;UBERON:0002619!1.31e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-32,73;UBERON:0001016,1.42e-31,75;UBERON:0004121,2.49e-26,95;UBERON:0000924,2.49e-26,95;UBERON:0006601,2.49e-26,95;UBERON:0002346,1.56e-22,64;UBERON:0003075,1.56e-22,64;UBERON:0007284,1.56e-22,64;UBERON:0000073,6.72e-22,54;UBERON:0010314,5.72e-21,92;UBERON:0001049,2.57e-20,52;UBERON:0005068,2.57e-20,52;UBERON:0006241,2.57e-20,52;UBERON:0007135,2.57e-20,52;UBERON:0010371,4.81e-19,73;UBERON:0000955,2.08e-17,47;UBERON:0006238,2.08e-17,47;UBERON:0002616,3.31e-17,46;UBERON:0003056,1.14e-16,49;UBERON:0002020,1.46e-16,34;UBERON:0003080,4.12e-16,40;UBERON:0002780,1.27e-15,39;UBERON:0001890,1.27e-15,39;UBERON:0006240,1.27e-15,39;UBERON:0003528,9.35e-14,29;UBERON:0002791,9.35e-14,29;UBERON:0001893,9.35e-14,29;UBERON:0000956,1.45e-09,21;UBERON:0001869,1.45e-09,21;UBERON:0000203,1.45e-09,21;UBERON:0002619,8.84e-08,17 | |||
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| |||
|short_description=p2@Zfp428 | |||
}} |
Revision as of 12:48, 14 September 2013
Short description: | p2@Zfp428 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp428_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 0bp_to_ENSMUST00000085998_5end |
EntrezGene: | Zfp428 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.17e-23 | 44 |
neurectodermal cell | 1.17e-23 | 44 |
neural cell | 1.87e-23 | 43 |
neuron | 1.35e-18 | 33 |
neuronal stem cell | 1.35e-18 | 33 |
neuroblast | 1.35e-18 | 33 |
electrically signaling cell | 1.35e-18 | 33 |
electrically responsive cell | 1.10e-16 | 39 |
electrically active cell | 1.10e-16 | 39 |
CNS neuron (sensu Vertebrata) | 7.28e-15 | 23 |
neuroblast (sensu Vertebrata) | 7.28e-15 | 23 |
embryonic cell | 2.59e-14 | 70 |
oligodendrocyte precursor cell | 6.42e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.49e-32 | 73 |
nervous system | 1.42e-31 | 75 |
ectoderm-derived structure | 2.49e-26 | 95 |
ectoderm | 2.49e-26 | 95 |
presumptive ectoderm | 2.49e-26 | 95 |
neurectoderm | 1.56e-22 | 64 |
neural plate | 1.56e-22 | 64 |
presumptive neural plate | 1.56e-22 | 64 |
regional part of nervous system | 6.72e-22 | 54 |
structure with developmental contribution from neural crest | 5.72e-21 | 92 |
neural tube | 2.57e-20 | 52 |
neural rod | 2.57e-20 | 52 |
future spinal cord | 2.57e-20 | 52 |
neural keel | 2.57e-20 | 52 |
ecto-epithelium | 4.81e-19 | 73 |
brain | 2.08e-17 | 47 |
future brain | 2.08e-17 | 47 |
regional part of brain | 3.31e-17 | 46 |
pre-chordal neural plate | 1.14e-16 | 49 |
gray matter | 1.46e-16 | 34 |
anterior neural tube | 4.12e-16 | 40 |
regional part of forebrain | 1.27e-15 | 39 |
forebrain | 1.27e-15 | 39 |
future forebrain | 1.27e-15 | 39 |
brain grey matter | 9.35e-14 | 29 |
regional part of telencephalon | 9.35e-14 | 29 |
telencephalon | 9.35e-14 | 29 |
cerebral cortex | 1.45e-09 | 21 |
cerebral hemisphere | 1.45e-09 | 21 |
pallium | 1.45e-09 | 21 |
regional part of cerebral cortex | 8.84e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.